Detail information of GWHGAAZE002617


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011082765.11.21829E-84PREDICTED: multiprotein-bridging factor 1b-like [Sesamum indicum]
COGYP_007249079.10.000003TIGR00270 family protein
Swissprottr|Q9LXT3|MBF1B_ARATH8E-81Multiprotein-bridging factor 1b
trEMBLtr|A0A022QFE0|A0A022QFE0_ERYGU6E-85Uncharacterized protein {ECO:0000313|EMBL:EYU26319.1}
TAIR10AT3G58680.11E-63multiprotein bridging factor 1B

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8289745882902038-
GWHAAZE00000001mRNA8289745882902038-
GWHAAZE00000001exon8289745882897577-
GWHAAZE00000001exon8289768082897762-
GWHAAZE00000001exon8289985982899942-
GWHAAZE00000001exon8290189782902038-
GWHAAZE00000001CDS8290189782902038-
GWHAAZE00000001CDS8289985982899942-
GWHAAZE00000001CDS8289768082897762-
GWHAAZE00000001CDS8289745882897577-
Transcript Sequence

Network for GWHGAAZE002617

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08523.11MBF19798.20E-22
PF01381.23HTH_3871382.00E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMBF1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf124.157
SRR3591706second leaf60.029
SRR3591707mature leaf84.140
SRR3591708Shoot apex113.531
SRR3591709Stem161.669
SRR3591710White floral bud156.066
SRR3591711White flower185.329
SRR3591712Green floral bud165.226
SRR3591713Yellow flower220.395
SRP173429 SRR8316895Juvenile bud stage 107.024
SRR8316896Juvenile bud stage 166.213
SRR8316897Juvenile bud stage 76.155
SRR8316894Third green stage 57.259
SRR8316900Third green stage 167.686
SRR8316901Third green stage 170.768
SRR8316898Complete white stage 88.602
SRR8316899Complete white stage 244.596
SRR8316903Complete white stage 140.747
SRR8316902Silver flowering stage98.161
SRR8316904Silver flowering stage102.330
SRR8316905Silver flowering stage67.647
SRR8316906Gold flowering stage 253.468
SRR8316907Gold flowering stage 219.837
SRR8316908Gold flowering stage 242.135
SRP132670SRR6706286Control200.557
SRR6706287Light intensity 50%177.409
SRR6706288Light intensity 20%187.315
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1170.848
CNS0095593Slightly white alabastrum(diploid) 2191.462
CNS0095594Slightly white alabastrum(diploid) 3206.691
CNS0095595Whole white alabastrum(diploid) 2182.765
CNS0095596Whole white alabastrum(diploid) 3163.586
CNS0095597Whole white alabastrum(diploid) 4175.086
CNS0095598Silvery flower (diploied) 1215.640
CNS0095599Silvery flower (diploied) 2206.066
CNS0095600Silvery flower (diploied) 3231.372
CNS0095601Golden flower (diploid) 1304.910
CNS0095602Golden flower (diploid) 2257.841
CNS0095603Golden flower (diploid) 3258.234
CNS0095604Slightly white alabastrum(tetraploid) 1197.125
CNS0095605Slightly white alabastrum(tetraploid) 2215.486
CNS0095606Slightly white alabastrum(tetraploid) 3220.747
CNS0095607Whole white alabastrum(tetraploid) 1191.301
CNS0095608Whole white alabastrum(tetraploid) 2192.326
CNS0095609Whole white alabastrum(tetraploid) 3192.907
CNS0095610Silvery flower (diploied) 1320.079
CNS0095611Silvery flower (diploied) 2321.507
CNS0095612Silvery flower (diploied) 3237.852
CNS0095613Golden flower (tetraploid) 1352.890
CNS0095614Golden flower (tetraploid) 2319.609
CNS0095615Golden flower (tetraploid) 3283.394
CRA001975CRR073297Stem 1201.713
CRR073298Stem 2225.805
CRR073299Stem 3227.764
CRR073300Leaf 1203.935
CRR073301Leaf 2212.575
CRR073302Leaf 3197.563
CRR073303Juvenile bud 1197.586
CRR073304Juvenile bud 2167.776
CRR073305Juvenile bud 3163.205
CRR073306Third green 1113.137
CRR073307Third green 2149.110
CRR073308Third green 3112.909
CRR073309Second white 1123.710
CRR073310Second white 2170.862
CRR073311Second white 3115.185
CRR073312Silver flowering 1119.797
CRR073313Silver flowering 291.699
CRR073314Silver flowering 399.366
CRR073315Gold flowering 1126.484
CRR073316Gold flowering 2123.588
CRR073317Gold flowering 3100.113
CRR073318Tawny withering 1172.049
CRR073319Tawny withering 2186.554
CRR073320Tawny withering 3192.319