Detail information of GWHGAAZE002731


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011098356.10PREDICTED: receptor-like protein kinase THESEUS 1 [Sesamum indicum]
COGYP_008151634.14E-24hypothetical protein SCE1572_26190
Swissprottr|Q9LK35|THE1_ARATH0Receptor-like protein kinase THESEUS 1 (Precursor)
trEMBLtr|A0A068V5C8|A0A068V5C8_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_106 {ECO:0000313|EMBL:CDP15747.1}
TAIR10AT5G54380.10protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8516185685164366+
GWHAAZE00000001mRNA8516185685164366+
GWHAAZE00000001exon8516185685162426+
GWHAAZE00000001exon8516246385163027+
GWHAAZE00000001exon8516306185164366+
GWHAAZE00000001CDS8516185685162426+
GWHAAZE00000001CDS8516246385163027+
GWHAAZE00000001CDS8516306185164366+
Transcript Sequence

Network for GWHGAAZE002731

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0185GO:0009225 nucleotide-sugar metabolic process GOslim:biological_process
GO:0008460 dTDP-glucose 4,6-dehydratase activity GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
EAR_family EAR_family
Protein Kinases RLK-Pelle_CrRLK1L-1 family Protein Kinases RLK-Pelle_CrRLK1L-1


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12819.8Malectin_like353722.30E-41
PF07714.18PK_Tyr_Ser-Thr4816891.10E-46
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_CrRLK1L-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf51.608
SRR3591706second leaf5.947
SRR3591707mature leaf0.249
SRR3591708Shoot apex16.897
SRR3591709Stem11.427
SRR3591710White floral bud14.554
SRR3591711White flower7.838
SRR3591712Green floral bud22.009
SRR3591713Yellow flower1.326
SRP173429 SRR8316895Juvenile bud stage 35.651
SRR8316896Juvenile bud stage 28.155
SRR8316897Juvenile bud stage 25.099
SRR8316894Third green stage 11.819
SRR8316900Third green stage 26.367
SRR8316901Third green stage 36.092
SRR8316898Complete white stage 4.044
SRR8316899Complete white stage 56.153
SRR8316903Complete white stage 6.556
SRR8316902Silver flowering stage4.217
SRR8316904Silver flowering stage2.138
SRR8316905Silver flowering stage1.163
SRR8316906Gold flowering stage 1.205
SRR8316907Gold flowering stage 1.206
SRR8316908Gold flowering stage 1.245
SRP132670SRR6706286Control29.039
SRR6706287Light intensity 50%41.934
SRR6706288Light intensity 20%45.663
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.000
CNS0095593Slightly white alabastrum(diploid) 228.444
CNS0095594Slightly white alabastrum(diploid) 320.284
CNS0095595Whole white alabastrum(diploid) 216.392
CNS0095596Whole white alabastrum(diploid) 310.954
CNS0095597Whole white alabastrum(diploid) 414.223
CNS0095598Silvery flower (diploied) 113.836
CNS0095599Silvery flower (diploied) 217.878
CNS0095600Silvery flower (diploied) 315.375
CNS0095601Golden flower (diploid) 118.088
CNS0095602Golden flower (diploid) 216.325
CNS0095603Golden flower (diploid) 315.653
CNS0095604Slightly white alabastrum(tetraploid) 110.163
CNS0095605Slightly white alabastrum(tetraploid) 27.353
CNS0095606Slightly white alabastrum(tetraploid) 325.623
CNS0095607Whole white alabastrum(tetraploid) 16.950
CNS0095608Whole white alabastrum(tetraploid) 27.104
CNS0095609Whole white alabastrum(tetraploid) 312.336
CNS0095610Silvery flower (diploied) 14.664
CNS0095611Silvery flower (diploied) 23.089
CNS0095612Silvery flower (diploied) 33.921
CNS0095613Golden flower (tetraploid) 10.299
CNS0095614Golden flower (tetraploid) 22.305
CNS0095615Golden flower (tetraploid) 32.781
CRA001975CRR073297Stem 125.633
CRR073298Stem 221.932
CRR073299Stem 322.014
CRR073300Leaf 144.543
CRR073301Leaf 252.809
CRR073302Leaf 330.694
CRR073303Juvenile bud 140.954
CRR073304Juvenile bud 231.324
CRR073305Juvenile bud 386.659
CRR073306Third green 123.564
CRR073307Third green 225.695
CRR073308Third green 324.813
CRR073309Second white 10.918
CRR073310Second white 20.670
CRR073311Second white 30.385
CRR073312Silver flowering 10.247
CRR073313Silver flowering 20.440
CRR073314Silver flowering 30.150
CRR073315Gold flowering 122.016
CRR073316Gold flowering 232.228
CRR073317Gold flowering 317.787
CRR073318Tawny withering 125.829
CRR073319Tawny withering 217.941
CRR073320Tawny withering 331.407