Gene detail

Detail information of GWHGAAZE002951

Functional Annotation

Database	Orthologs	Annotation
Nr	CDP13709.1	unnamed protein product [Coffea canephora]
Swissprot	tr\|Q8GY23\|UPL1_ARATH	E3 ubiquitin-protein ligase UPL1
trEMBL	tr\|A0A068UZR4\|A0A068UZR4_COFCA	Coffea canephora DH200=94 genomic scaffold, scaffold_76 {ECO:0000313\|EMBL:CDP13709.1}
TAIR10	AT1G55860.1	ubiquitin-protein ligase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	89119666	89136913	+
GWHAAZE00000001	mRNA	89119666	89136913	+
GWHAAZE00000001	exon	89119666	89119775	+
GWHAAZE00000001	exon	89120671	89120781	+
GWHAAZE00000001	exon	89120904	89120999	+
GWHAAZE00000001	exon	89121081	89121287	+
GWHAAZE00000001	exon	89122176	89127866	+
GWHAAZE00000001	exon	89128606	89129008	+
GWHAAZE00000001	exon	89129297	89130837	+
GWHAAZE00000001	exon	89130915	89131232	+
GWHAAZE00000001	exon	89131973	89132174	+
GWHAAZE00000001	exon	89132277	89132563	+
GWHAAZE00000001	exon	89133741	89134030	+
GWHAAZE00000001	exon	89134137	89135247	+
GWHAAZE00000001	exon	89135372	89135518	+
GWHAAZE00000001	exon	89135603	89135683	+
GWHAAZE00000001	exon	89135838	89136063	+
GWHAAZE00000001	exon	89136141	89136280	+
GWHAAZE00000001	exon	89136575	89136681	+
GWHAAZE00000001	exon	89136811	89136913	+
GWHAAZE00000001	five_prime_UTR	89119666	89119742	+
GWHAAZE00000001	CDS	89119743	89119775	+
GWHAAZE00000001	CDS	89120671	89120781	+
GWHAAZE00000001	CDS	89120904	89120999	+
GWHAAZE00000001	CDS	89121081	89121287	+
GWHAAZE00000001	CDS	89122176	89127866	+
GWHAAZE00000001	CDS	89128606	89129008	+
GWHAAZE00000001	CDS	89129297	89130837	+
GWHAAZE00000001	CDS	89130915	89131232	+
GWHAAZE00000001	CDS	89131973	89132174	+
GWHAAZE00000001	CDS	89132277	89132563	+
GWHAAZE00000001	CDS	89133741	89134030	+
GWHAAZE00000001	CDS	89134137	89135247	+
GWHAAZE00000001	CDS	89135372	89135518	+
GWHAAZE00000001	CDS	89135603	89135683	+
GWHAAZE00000001	CDS	89135838	89136063	+
GWHAAZE00000001	CDS	89136141	89136280	+
GWHAAZE00000001	CDS	89136575	89136681	+
GWHAAZE00000001	CDS	89136811	89136913	+

Transcript Sequence
>GWHTAAZE002955 CGAGACTTCGATCCATTCTACAATAATTTCACTCCTTTTGTTTTGGGCAATGTTTTTCTTTGGTTGATTAATTCAAGATGAAGTTGAAGAGGAGGAGAACCTTAGAAGTGCACGCACCTGGACATGCACATCGATTGGAGATTAGCTGGCCAAACCAAGGGGGAATCTTCTTGGGGAACATAATGCCAGGAGTTCTCTTGGGCCTGTTATTTCCAACTGAACCTCCAAAAATTAGATCCTTCATCAATGGTGTCACTGCCGTGCCACTTGAAAATATAGAAGAACCCCTTAAAAGTTTTGTCTGGGACTTTGACAAGGGAGATTTTCATCACTGGCTTGATCTCTTCAACCACTTCGATAGTTTTTTTGAGAAGTACATAAAGTCGAGAAAAGATTTACAGGTTGAGGATAACTTTTTGGAGTCTGATCCTCCCTTCCCAAGAGAGGCCGTTCTTCAGATTCTCCGTGTAATAAGAATAATATTGGAAAACTGCACAAATAAGCACTTCTACAGTTCATATGAGCACCATATTTCATCTCTGCTTGCTTCAACTGATGCGGAAGTTGTTGAGGCCGGCCTGCAAACTTTGGTGGCTTTTTTAAAGAAAACGATTGGAAAGTACATTATAAGAGATACTTCTCTTAATTCAAAATTATTTGCTTTTGCACAAGGATGGGGGGGAAAGGAAGAAGGCCTTGGATTACTTGCATGTGCTATGCAGAATGGATCAGACCCAATTGCGTATGAGTTAGGTAGCACTCTTCATTTTGAGTTCTATGCATCAAATGAGCCTTCAGATGAACTCTCTGCTACAGAACAGCCTACTGAAGGTTTACAAGTCATTCATTTGCCAAATATTAGCAACTGCCCAGAGTCAGATCTTGAACTCCTGAATAAATTAGTCATGGAGTACAAAGTACCCCCTTCTTTAAGATTTTCTCTTTTGACGAGATTGCGGTTTGCAAAGGCTTTCAGCTCCTTATCGGCCCGACAGCAATACACATGCATTCGCTTGTATGCCTTTGTAGTCCTCGTTCAAGCTTGTGGTGATACTGATGATTTGGGCTCTTTCTTTAACAATGAGCCTGAGTTCATCAATGAATTGGTTATGTTACTGAGCTATGAAGATGCAGTTCCTGAAAAAATCCGAATTCTGAGCCTGCTTTCCTTGGTTGCTCTATGTCAAGATCGGTCGCGCCAGCCTACTGTTTTGACTGCTGTAACATCCGGTGGGCACCGTGGCATACTATCAAGCCTCATGCAGAAAGCCATTGATGCTGTTGTTAGTAATTCGTCAAAGTGGTCTGTTGTTTTTGCGGAGGCTTTATTATCTCTTGTCACTGTTTTGGTCTCATCTTCATCGGGTTGTTCGGCGATGCGTGAAGCAGGATTTATACCGACTCTTCTACCTCTTCTTAAAGATACAGATTCCCAGCATCTGCATTTGGTCAGCACAGCGGTACATATTCTAGAAGCTTTTATGGATTACAGCAATCCTGCTGCCACACTATTCAGAGACTTGGGTGGTTTAAATGATACCATTTCCCGCCTGAAAGTAGAAGTTTCTCACGTTGAAAATGGTTCAAAGCAGCAAGGAATTTCTAATGAGCTAGAAAGTTCAGAGTGTAGTAGCTCTCAAGTTGTACCGGGCACTTCTACTGAGCTAGATAGCATGCAGCCTCTTTATTCTGAAGCATTAGTTGCATATCATAGGAGGTCACTAATGAAAGCTTTGCTGCGTGCTATATCTTTGGGAACATATGCTCCTGGAAACACTTCTCGTGTTTATGGTTCTGAGGAGAGTTTGTTGCCGCATTGCTTATGCATTATATTTAAAAAGGCAAAAGATTTCGGTGGGGGTGTGTTCTCCCTTGCAGCAACCGTTATGAGCGATCTCATTCACAAGGATCCTACCTGCTTTTCTATCTTAGAAGCAGCTGGTCTACCGTCTGCATTCTTAGATGCTATAATGGACGGTGTTCTTTGCTCTGCAGAAGCCATAACATGCGTACCCCAGTGCTTGGATGCTTTGTGCCTGAACAATAACGGCCTTCAGGCTGTGAAAGATTGCAATGCTTTGAGGTGTTTTGTGAAGATATTTACATCTAGAATGTATTTGCGTGTACTTACTGGTGATACACCGGGATCTTTGTCTAGCGGTCTGGATGAGCTAATGCGCCATGCTTCCTCGTTACGTGGGCCTGGGGTGGACATGTTAACCGAGATGTTGAATGCCCTTGCAAAGCTTGGATCTGGGTTAGAAGCTGCTTCTTCCTTATCCGTTGATTCTCCAAGCTGTTCAACTCCCGTTCCCATGGAAACTGATATTGATGATAGGAATTTGGATGCGTCAGATGACAGGGTTGGAAATTCTGAGCAGCTCCTGGAACCTTCTTCAGATGATTCGTTGCTAAATGTTGAGTCTTTTCTTCCTGATTGTATAAGCAATGTTGCTCGTCTACTGGAAACAATTCTTCAGAATTCTGACACATGCCGTATGTTTGTTGAAAAGAAGGGCGTTGAAGCTGTTTTGCAGTTATTTACTTTGCCCTTACTGCCTCTTTCTTTTTCTGTTGGCCAGAGTATATCATCTGCATTTAAGAACTTTTCTCCACAGCATTCTGCCTCCCTTGCTCGAGCGGTATGTTCATTTTTGAGAGAGCATTTGAAATCAACGAATGAACTTCTAGGTTCCATTGGAGGGACACAACTTGCTGAGGTAGAAACTGCAAAGCGGACAAAGCTGTTGAGATATCTGTCCAGTCTTGAAGGCATCGTGTCCCTTTCTAATTCTTTGTTGAAGGGGACTACTACTACTGTGGTGTCTGAATTGGGAAATGCTGATGCTGATGTGCTGAAAGACCTTGGGAGGGCCTACAGAGATATACTGTGGCAAATTTCTTTGAGTTGTGATTCTAAAGTGGATGAGCAGCTAACTAATGAAGTAGATCCCGATAATGCAGATGATAATTTAGCTGCTAATACTGCTGGAAGAGAGAGTGATGATGATGTAAATGTTCCAGCAGTGAGATACACGAATCCTGTTTCTATTAGGAATAGTTCTCACCCCCAGTGGGGACGCGAGTTTCTTTCGGTGGTTCGTTCTGGTGAAGGGTTTAGTCGTCGTAGTCGACATGGGCTAGCACGCATCCGAGGAGGAAGGACTGGCAGGCACCTGGAATCTTTACACATGGAACCTGAAGTTCCTGCAAACACTGCAGATACTTCATCACAGGATTTAAAGAAGAAAAGTCCCGAGGTTCTTGTTTTGGAGAGCCTAAACAAACTTGCTTCCACTTTGCGGTCTTTCTTTATTGCACTTGTCAAAGGATTTACATCGCCAAATCGTCGAAGAGCTGAGACTGGGACATTGAGTGCTGCTTCAAAGAGCATTGGAACTGCCCTTGCCAAAGTTTTTCTTGAGGCTCTTAGTTTCTCAGGGTATTCTACCTCTGTTGCGCTTGATATTTCACTGTCTGTCAAGTGTCGCTATCTTGGAAAGGTTGTGGATGATATGGTGGTGCTTACGTTTGATAATAGGCGACGTACCTGTTATACAGTGATGATCAACAACTTCTATGTCCATGGAACCTTTAAGGAGCTTCTTACAACATTCGAAGCTACAAGTCAATTGCTATGGACGCTGCCTTACTCTCTTCCAGCTTCTGGTACAGATCATGAAAAAAGCGGGGAGGGAAGCAAATCGTCCCACAATTTATGGTTGCTTGATACATTACAGAGCTATTGCCAAGTACTCGAATATTTTGTTAATTCTTCTTTACTGCTGTCTCCAACCTCAGCACTCCAGGCTCAGCTGCTTGTTCAGCCCGTTGCAGTCGGTTTGTCAATTGGGTTGTTTCCTGTTCCTAGAGACCCTAAAGTTTTTGTTCGTATGCTGCAGTCTCAGGTTCTTGATGTGATCCTACCTGTCTGGAATCACCCCATGTTCCCTAACTGTAGTGTGGGTTTTATCACTTCGATTGTCTCACTTGTTACCCATGTATGCTCTGGTGTTGGAGATGTGAAACGGAATCGCAATGGTGTGTCAGGGAGTACAAATCAGAGGTTTATGCCTCCCCCACCTGATGAAGCTACTATTGCTACCATTGTGGAGATGGGATTTACGAGGGCTAGAGCAGAGGAAGCATTGAGACGGGTGGAAACTAATAGTGTAGAGATGGCAATGGAATGGTTGTTTAGTCATTCCGAAGATCCTGTACAGGAGGACGATGAACTGGCTAGAGCACTTGCTTTGTCCCTAGGGAGTTCATCAGATACATCTAAAGGAGGGAACACCGATAAATCGACAGACCTCCTGACAGAAGAGAGACAAACAAAGGCACCTCCTGTTGATGACATACTTGCTGCAACAATGAAGTTGTTTCAGAGTTGTGACTCCATGGCTTTTCCTTTAACAGATTTGCTTGCCACACTCTGCAATCGGAACAAAGGAGAAGATCGAGCAAGAGTGGTTTCTTATCTAATTCAGCAGCTAAAGCTTTGCCCGTTGGAATTTTCCAAGGATACAAGTGCACTGTGTATGATATCGCACACTTTAGCATTGCTTCTTTCTGAAGATGGTTGTACAAGGGAAATTGCTGCACGGAATGGCATTGCCTCTGTTGCAATAGATATCTTGATGACCTTCAAGGTTAGAACAGAGTTGGGAAATGAGCTTTTGGTCCCAAAATGCATTAGTGCTTTGCTTCTTATCTTGGATAATTTGTTGCAGTGTAGACCTAAAATTTCTTCCGATACTTCAGAAGCAACCCCGGCAGGATCTTTACCTGACTCATCTGGAGAGCATACTTCCTTGCCAGTTCCACAAGAAATTTCTGAGAAGAAGTCAACTCCGATGGCCTTGGAGAATGATTCTAGAACTGCATTTGGGAAGATATTTGGAAATTCTACCGGTTTTTTGACTTTTGAGGAGAGTGGTAGAGCACTGGTTGTTGCTTGTGATTTAATAAAACATCATGTTCCAGCTGTTGTCATGCAGGCTGTATTACAATTATGTGCTCGCTTGACAAAAACACATGCTCTGGCTCTGCAATTCCTTGAAAATGGAGGCATGCCTGCCCTTTTTAGTATTCCAAAATGTTGCTTCTTCCCTGGATATGACGTCGTTGCATCTGCTATTATTCGCCATCTCATTGAAGACCCTCAGACACTGCAAACAGCTATGGAACTGGAGATACGGCAAACACTAACTGGAAATCGTCACGCTGGTCGGATTACTCCACGGACATTTTTGACCTCAATGGCACCTGTCATCTCTAGAGATCCAGAGGTTTTCATGAAAGCAGCCACAGCTGTTTGTCAGTTGGAATCATCCGGAGGGAGGACTGTTGTTGTATTATCAAAGGAAAAAGAGAGAGAGAAGGACAAATCGAAAGCCCCCGGTGTTGAACATGGAGTATCTTCTGAAGAAAGTGTTCGAATTCCTGAGAATAGAATCCCTGATGGGCCTGGTAAGTTTGCCAAAGGCCACAAAAAGATTCCTGCAAATCTTACGCAGGTAATTGATCAGCTGCTTGAAATTGTATTGAGATGTCCGTCACCAAAAAGCAAGGATGATAGTTTAAATTACTCGAGTGCAATGGATGTTGACGAGCTTGCTACCAAGGTAAAGGGTAAATCAAAGGTTGACGAGACAAGAAAGGTCGAGTCGGAAAGTCTTTCAGAAAGATCAGCTGGTCTAGCTAAGGTGACTTTTGTCCTCAAGTTATTGAGTGATATACTTCTGATGTATGTACATGCCTTTGGGGTTATACTGAAACGGGATCTGGAAATGTGCCAACTCCGGGTATCTAATCTAGAATGTCCTGGACATGGTGGGATATTGCATCATGTCTTGCATCGGCTTCTTCCATTGACTGCAAATAAAACTGCTGGACCTGACGAATGGAGAGGCAAGTTGTGTGAAAAAGCTTCCTGGTTTCTGGTGGTTTTTTGCGGTCGTTCTGGTGAAGGGCGTAGACGTGTAATTAATGAACTTGTGAAAGCCCTATCTTCGTTTTCAGACTTCGAGAGCAATTCATCCAAGAGCAGTTTATTGCCAGATAAAAAGGTTCTTGCGTTTGTCGACTTGGTATATTCCATTTTGTCAAAGAATTCATCATCCAACAACATTCCAAGTTCTGGCTGCTCACCGGATATAGCAAAAAGCATGATAGACGGAGGAATTGTTCAATGCCTTTCCAGCATTCTTCAGGTGATGGATTTGGATCATCCCAATGCTCCCAAAGTTGCAAATCTCATACTTAAGGCTTTGGAAAGCCTAACCCGGGCCGCCAATGCTAGTGAGCAACTCTTCAAATCTAGTGCGCCGAACAAGAAAAAATCAATTGAATCGGTTGAGAGGTCTGACGATCATATAATGACCACTTCTGTCACTCAGACTGTAGAGCCTAATCAGAATATCAGTCGGCATGAAGGTGCTGAAGTTGAGGATACAGAACATCATCTTCAAGGTTCATCTCAGAATGAAGGTGACCATTATTCGATTTCAAACCAGTCTGTAGAACAGGATATGAGAATTGAGGTGGAGGAGAACGCGGTTGCCAATCAACCTGTGGAGCTGGGGATGGATTTCATGCGGGAAGAGATGGAGGATGAGGTAAGGTGGAGGGAAGCCCTTGATGGGCTAGATCATTTGCAGGTACTGGGTCAACCAGGTGCTGAGAGTGGACTCATTGATGTTGCTGCTGAGCCCTTTGAAGGGGTGAATGTTGATGACCTTTTTGGTCTCCGCAGGCCTTTAGGGTTTGATCGCCGTCGGCAGACTAGTAGGGCTTCCTTGGAGCGATCTGTTACAGAAGGTAATGGTCTTCAACATCCTCTCCTGTTGAGACCACCATCGCAGTCTGGGGATATGGTTTCAATGTGGTCATCAGGTGGCAACTCATCTAGGGATTTGGAAGCTCTCTCTGCTGGAAGCTTTGATGTAGCTCATTTCTACATGTTTGATACTCCAGTGCTTCCCTTTGATCATGTACCAGCTAGTGTATTTGGTGACCGTCTCGGTGCAGCACCATCATCATTGGCTGATTTTTCTGTTGGTTTAGAGTCACTGCGAGTGCCTGGGCGAAGAGGGCCAGGGGATGGACGGTGGACTGATGATGGTCTACCACAAGCAGGAGGTCAGGCTGCTGCTATTGCACACGCGGTAGAAGAACAGTTTGTATCTCAGTTACGTGGCCCCCCTGCCAGCATTTCTGCTGAAAGGCAGTCACATAGCTCAGGACCACCTGAGAAATCTTCTGATTTGCCATTAGCGAACGATAGTCAACTGGCTGTAGAGGTCGATAACAGTGGGGCACAACACGGAACTGTGCATCATGAAGACAGTCCAATGGGTCAAGAACAAGCTAGCCCAGATGTAGTTGTTGAACAAGCAGGTGAAGGCCTACAGGTGAATGAGCCTATGTCAACTGTTGCGGTGAACCATACACCAAATGGTCTTGATAGCATGGATGTTGGGGAAGGGAATGACCCCAATGGCATTGAGCAGGTAGAGTCAACTTCAGGCATTCTTACCTCTTCTTTGCACCTTCAGGGTGATTCAGAACGTGAAAGGAGTTCTCAAGTACATCCAGCAACAGATACTTCTTCAGCAATGGATAGACGGACAAGTAGTGATGCGCTGGTAAATTCTAGTGGGGATATGCCTAGTCTTGCCGATTCTCATGCTTTTTCAGTTCAAGGAAGTGGTGATGTCGAAATGAATGGCATTGAAACAGAAGGAAATCAGACTGGACACCTCCAACCTTCCGAAGTTAATAGAGAGGAGCCATCATCACTGCAGAATGCTACTGTCACTCAGGATGTAGATCAGGTTGACGGTACTGGTTTGAATAATGAAGCTCCTGATGCAAATGGTATAGACCCGACCTTCTTGGAGGCTCTTCCTGAAGATCTCCGGGCAGAAGTTCTAGCTTCACAGCAATCCCAGCCTGCTCCCCAAGCTCCTACTTATGTGCCTCCAGCAGCAGAAGATATTGATCCAGAGTTTTTAGCAGCTCTCCCTCCAGATATTCAAGCAGAAGTTTTAGCCCAACAAAGTGTGCGAAGGGTTGCACAGCAAGCTGAAGGACAACCTGTTGACATGGACAATGCTTCAATAATAGCCACTTTTCCTGCTGATTTGCGCGAAGAGGTGCTTTTGACTTCATCAGAGGCAGTTCTGTCAGCATTGCCTTCTCCTTTACTTGCTGAAGCACAAATGCTTAGGGACAGAGCAATGAGTCATTATCAGGCACATAGCCTGTTTGGTGGTAGCCACAGGCTTAATAATAGGAGGAACGGGTTGGGGTTTGACAGGCAGACAGTGATGGACAGGGGTGTTGGTGTTACAATTGGCAGAAGGCCGTCTTCTGCGCTTGCAGAGAGTATGAAGTTGAAGGAACTAGAAGGGGAGCCCCTTCTTGATGCTAATGCATTGAAAGCATTGATTAGGCTCCTTCGCTTGGCACAGCCTCTTGCGAAAGGCCTTTTGCAGCGACTCTTGTTGAACTTATGTGCGCATAGTTGTACAAGGGCAATCCTCGTTTGTGTTCTACTTGACATGATCAAGCCTGTGACTGACGGCCCTGCTGGCAGATTGACAACAGTTAATTCTCAAAGACTTTATGGGTGTCAATCCAATGTTGTTTATGGTCGATCTCAATTGTTGGATGGTCTCCCTCCTCTAGTGCTGCGTCGGATTCTTGAGATTTTGACATATTTGGCCACCAATCATTCTGCTGTTGCCAATATCTTGTTCTACTTTGACCCTTTACTTATTCCAGAGTCTTCAAATCCAATTTTTCTTGAAACCAATAAGGATAAAGGCAAAGAGAAAATTGTTGAAGGAGATCTGTCAAGTCCTGTCCAGAGCCACCATGAGGGGGATGTTCCTTTGGTATTGTTACTGAAGCTCTTGAATCAGCCACTTTTCTTGCGAAGCATTGCTCATCTGGAGCAGGTGATGGGTTTGCTACAAGTAGTTGTTGACACTGCAGCATCAAAGTTGAATCGCCAGACTCAGTCTGAACTAGCTGCAGCGAGTTCTCCAAATCTCTCTGGCAATGAAGCTGTTAGTGATGTTCCAAAAGATTCTCCTTCGTTGGATGCGGAATCAAATCGAGCTGATAAAAGTGGTGGTGATGGAGTATCCACATCAGATGGACAGACAAGCAATAAGATGTATGACATCTTTTTGCAGCTACCACAACCGGATTTGCATAATCTAAGCGGCCTTCTTGGTTATGAGGGGCTTTCAGAAAAAATTTACACGCTCGCTGGTGAGGTTTTGAAGAAGTTGGCCTCTGTTGCTGCCCCTCATCGGAAATTTTTCATTATAGAGCTTTCAGACTTGGCTCATAGTTTGAGCAGTTCAGCTGTTAGTGAGCTCGTAACTCTTAGGAACACACACATGCTTGGTTTGAGTGCTGGATCCATGGCAGGGGCCGCAATCCTACGTGTAATACAGACGCTCAGCTCACTCACTTCAGCCACTACTGATGGTAATAGAAGTATGGAGAGTGACGGAGAACAAGAAGAGCATGCGACTATGTGGAAGCTAAATGTAGCACTCGAGCCGTTGTGGCAAGAACTGAGCCACTGTATAAGTACAACTGAGATTCAGCTACCACAAAGTTCATTCTCTTCAATCACGTCGACTTTAAACGTGGAGGAGCCTGTACAAGGTTCATCAGTTCTCTCTCCCCCGCTTCTTCCAGGAGCTCAGAGACTCTTGCCTTTCATTGAGGCTTTCTTGGTTTTGTGCAAAAAACTGCAAGCAAACAATTCCCTGACGCAACAGCATGATCATGCTGATGCAACTGCGAGAGAAGTGAAGGAGTTTTCTGGAAGTTCTTCTCTGTTGTCTACAAAAGTTGATGGTGCTGTAACATTTGCGAGGTTTGCTGAGAAGCATCGCCGCCTTCTTAATGCTTTTGTCAGGCAAAATCCCAGCTTATTGGAGAAGTCACTTTCAATGATGCTGAAAGCACCGAGGTTGATTGATTTTGACAACAAAAGAGCTTATTTCCGTTCTAGAATTAGGCATCAGCACGAGCAACACCTATCTGGTCCTCTTCGGATAAGTGTCCGGCGAGCATATGTTTTAGAGGACTCGTATAACCAGTTGCGAATGCGGCCAACTCAGGACTTGAGGGGACGGTTGAATGTGCATTTTCAAGGTGAAGAGGGTATTGACGTAGGTGGCTTGACGAGGGAATGGTATCAATTACTGTCAAGGGTCATATTTGACAAAGGAGCTTTGCTTTTCACCACGGGGGGAAACAATGCAACCTTCCAACCAAACCCTAACTCTGTCTACCAGACTGAGCATCTTTCTTACTTCAAATTTGTGGGCCGCGTGGTCGCTAAAGCGCTGTTTGATGGGCAACTGCTGGATGTTTATTTCACTCGGTCATTCTACAAGCACATTCTTGGTGTGAAAGTAACTTATCATGATATAGAGGCTGTTGATCCTGATTACTACAAAAACTTGAAGTGGATGCTTGAGAATGATGTGAGTGAAATACCTGATTTGACATTTAGCATGGATGCGGATGAAGAAAAACACATCCTCTACGAGAAAACAGAGGTTACTGATTATGAGCTTAAACCGGGAGGAGGAAATATAAGGGTCACGGAAGAAACAAAGCACGAGTATGTGGACCTTGTTGCTGAACACATTTTAACAAATGCGATTCGTCCACAAATTAATTCATTCCTAGAAGGCTTCAATGAACTGATTCCGGGGGAACTTATCTCTATTTTTAATGATAAAGAGCTTGAGCTACTAATCAGTGGGCTTCCAGAAATTGACTTGGAAGACCTGAAGTCCAACGCAGAGTATACTGGGTACACAGCAGCATCTTGTGTTGTTCAGTGGTTTTGGGAGGTGGTGAAATACTTCAACAAGGAAGATATGGCAAGATTACTGCAATTCGTAACTGGTACATCTAAGGTTCCTTTGGAGGGTTTTAAAGCGTTACAAGGCATTTCGGGTCCACAGAGGTTTCAGATTCACAAGGCATATGGCGCTCCTGAGCGGCTGCCATCGGCTCATACCTGCTTCAACCAACTAGACCTTCCCGAGTATTCTACCAAGGAACAACTTCAAGAGCGCTTGCTACTAGCCATCCATGAAGCAAGTGAAGGATTTGGCTTTGGTTGA

Network for GWHGAAZE002951

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF06012.13	DUF908	122	399	1.60E-40
PF06025.13	DUF913	459	829	4.30E-91
PF00627.32	UBA	1336	1373	3.00E-08
PF14377.7	UBM	2596	2624	3.90E-10
PF14377.7	UBM	2637	2662	7.00E-10
PF14377.7	UBM	2673	2703	6.00E-07
PF00632.26	HECT	3386	3696	2.40E-88

Protein Sequence

>GWHPAAZE002953
MKLKRRRTLEVHAPGHAHRLEISWPNQGGIFLGNIMPGVLLGLLFPTEPPKIRSFINGVTAVPLENIEEPLKSFVWDFDKGDFHHWLDLFNHFDSFFEKYIKSRKDLQVEDNFLESDPPFPREAVLQILRVIRIILENCTNKHFYSSYEHHISSLLASTDAEVVEAGLQTLVAFLKKTIGKYIIRDTSLNSKLFAFAQGWGGKEEGLGLLACAMQNGSDPIAYELGSTLHFEFYASNEPSDELSATEQPTEGLQVIHLPNISNCPESDLELLNKLVMEYKVPPSLRFSLLTRLRFAKAFSSLSARQQYTCIRLYAFVVLVQACGDTDDLGSFFNNEPEFINELVMLLSYEDAVPEKIRILSLLSLVALCQDRSRQPTVLTAVTSGGHRGILSSLMQKAIDAVVSNSSKWSVVFAEALLSLVTVLVSSSSGCSAMREAGFIPTLLPLLKDTDSQHLHLVSTAVHILEAFMDYSNPAATLFRDLGGLNDTISRLKVEVSHVENGSKQQGISNELESSECSSSQVVPGTSTELDSMQPLYSEALVAYHRRSLMKALLRAISLGTYAPGNTSRVYGSEESLLPHCLCIIFKKAKDFGGGVFSLAATVMSDLIHKDPTCFSILEAAGLPSAFLDAIMDGVLCSAEAITCVPQCLDALCLNNNGLQAVKDCNALRCFVKIFTSRMYLRVLTGDTPGSLSSGLDELMRHASSLRGPGVDMLTEMLNALAKLGSGLEAASSLSVDSPSCSTPVPMETDIDDRNLDASDDRVGNSEQLLEPSSDDSLLNVESFLPDCISNVARLLETILQNSDTCRMFVEKKGVEAVLQLFTLPLLPLSFSVGQSISSAFKNFSPQHSASLARAVCSFLREHLKSTNELLGSIGGTQLAEVETAKRTKLLRYLSSLEGIVSLSNSLLKGTTTTVVSELGNADADVLKDLGRAYRDILWQISLSCDSKVDEQLTNEVDPDNADDNLAANTAGRESDDDVNVPAVRYTNPVSIRNSSHPQWGREFLSVVRSGEGFSRRSRHGLARIRGGRTGRHLESLHMEPEVPANTADTSSQDLKKKSPEVLVLESLNKLASTLRSFFIALVKGFTSPNRRRAETGTLSAASKSIGTALAKVFLEALSFSGYSTSVALDISLSVKCRYLGKVVDDMVVLTFDNRRRTCYTVMINNFYVHGTFKELLTTFEATSQLLWTLPYSLPASGTDHEKSGEGSKSSHNLWLLDTLQSYCQVLEYFVNSSLLLSPTSALQAQLLVQPVAVGLSIGLFPVPRDPKVFVRMLQSQVLDVILPVWNHPMFPNCSVGFITSIVSLVTHVCSGVGDVKRNRNGVSGSTNQRFMPPPPDEATIATIVEMGFTRARAEEALRRVETNSVEMAMEWLFSHSEDPVQEDDELARALALSLGSSSDTSKGGNTDKSTDLLTEERQTKAPPVDDILAATMKLFQSCDSMAFPLTDLLATLCNRNKGEDRARVVSYLIQQLKLCPLEFSKDTSALCMISHTLALLLSEDGCTREIAARNGIASVAIDILMTFKVRTELGNELLVPKCISALLLILDNLLQCRPKISSDTSEATPAGSLPDSSGEHTSLPVPQEISEKKSTPMALENDSRTAFGKIFGNSTGFLTFEESGRALVVACDLIKHHVPAVVMQAVLQLCARLTKTHALALQFLENGGMPALFSIPKCCFFPGYDVVASAIIRHLIEDPQTLQTAMELEIRQTLTGNRHAGRITPRTFLTSMAPVISRDPEVFMKAATAVCQLESSGGRTVVVLSKEKEREKDKSKAPGVEHGVSSEESVRIPENRIPDGPGKFAKGHKKIPANLTQVIDQLLEIVLRCPSPKSKDDSLNYSSAMDVDELATKVKGKSKVDETRKVESESLSERSAGLAKVTFVLKLLSDILLMYVHAFGVILKRDLEMCQLRVSNLECPGHGGILHHVLHRLLPLTANKTAGPDEWRGKLCEKASWFLVVFCGRSGEGRRRVINELVKALSSFSDFESNSSKSSLLPDKKVLAFVDLVYSILSKNSSSNNIPSSGCSPDIAKSMIDGGIVQCLSSILQVMDLDHPNAPKVANLILKALESLTRAANASEQLFKSSAPNKKKSIESVERSDDHIMTTSVTQTVEPNQNISRHEGAEVEDTEHHLQGSSQNEGDHYSISNQSVEQDMRIEVEENAVANQPVELGMDFMREEMEDEVRWREALDGLDHLQVLGQPGAESGLIDVAAEPFEGVNVDDLFGLRRPLGFDRRRQTSRASLERSVTEGNGLQHPLLLRPPSQSGDMVSMWSSGGNSSRDLEALSAGSFDVAHFYMFDTPVLPFDHVPASVFGDRLGAAPSSLADFSVGLESLRVPGRRGPGDGRWTDDGLPQAGGQAAAIAHAVEEQFVSQLRGPPASISAERQSHSSGPPEKSSDLPLANDSQLAVEVDNSGAQHGTVHHEDSPMGQEQASPDVVVEQAGEGLQVNEPMSTVAVNHTPNGLDSMDVGEGNDPNGIEQVESTSGILTSSLHLQGDSERERSSQVHPATDTSSAMDRRTSSDALVNSSGDMPSLADSHAFSVQGSGDVEMNGIETEGNQTGHLQPSEVNREEPSSLQNATVTQDVDQVDGTGLNNEAPDANGIDPTFLEALPEDLRAEVLASQQSQPAPQAPTYVPPAAEDIDPEFLAALPPDIQAEVLAQQSVRRVAQQAEGQPVDMDNASIIATFPADLREEVLLTSSEAVLSALPSPLLAEAQMLRDRAMSHYQAHSLFGGSHRLNNRRNGLGFDRQTVMDRGVGVTIGRRPSSALAESMKLKELEGEPLLDANALKALIRLLRLAQPLAKGLLQRLLLNLCAHSCTRAILVCVLLDMIKPVTDGPAGRLTTVNSQRLYGCQSNVVYGRSQLLDGLPPLVLRRILEILTYLATNHSAVANILFYFDPLLIPESSNPIFLETNKDKGKEKIVEGDLSSPVQSHHEGDVPLVLLLKLLNQPLFLRSIAHLEQVMGLLQVVVDTAASKLNRQTQSELAAASSPNLSGNEAVSDVPKDSPSLDAESNRADKSGGDGVSTSDGQTSNKMYDIFLQLPQPDLHNLSGLLGYEGLSEKIYTLAGEVLKKLASVAAPHRKFFIIELSDLAHSLSSSAVSELVTLRNTHMLGLSAGSMAGAAILRVIQTLSSLTSATTDGNRSMESDGEQEEHATMWKLNVALEPLWQELSHCISTTEIQLPQSSFSSITSTLNVEEPVQGSSVLSPPLLPGAQRLLPFIEAFLVLCKKLQANNSLTQQHDHADATAREVKEFSGSSSLLSTKVDGAVTFARFAEKHRRLLNAFVRQNPSLLEKSLSMMLKAPRLIDFDNKRAYFRSRIRHQHEQHLSGPLRISVRRAYVLEDSYNQLRMRPTQDLRGRLNVHFQGEEGIDVGGLTREWYQLLSRVIFDKGALLFTTGGNNATFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWMLENDVSEIPDLTFSMDADEEKHILYEKTEVTDYELKPGGGNIRVTEETKHEYVDLVAEHILTNAIRPQINSFLEGFNELIPGELISIFNDKELELLISGLPEIDLEDLKSNAEYTGYTAASCVVQWFWEVVKYFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQRFQIHKAYGAPERLPSAHTCFNQLDLPEYSTKEQLQERLLLAIHEASEGFGFG

Gene family

Gene family	subfamily
Ubiquitin Family	HECT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0004842	molecular_function	ubiquitin-protein transferase activity
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	23.588
	SRR3591706	second leaf	11.341
	SRR3591707	mature leaf	12.960
	SRR3591708	Shoot apex	13.760
	SRR3591709	Stem	28.457
	SRR3591710	White floral bud	21.912
	SRR3591711	White flower	26.083
	SRR3591712	Green floral bud	18.337
	SRR3591713	Yellow flower	15.107
SRP173429	SRR8316895	Juvenile bud stage	12.418
	SRR8316896	Juvenile bud stage	16.959
	SRR8316897	Juvenile bud stage	8.687
	SRR8316894	Third green stage	9.342
	SRR8316900	Third green stage	15.032
	SRR8316901	Third green stage	15.701
	SRR8316898	Complete white stage	2.615
	SRR8316899	Complete white stage	10.635
	SRR8316903	Complete white stage	11.293
	SRR8316902	Silver flowering stage	5.999
	SRR8316904	Silver flowering stage	12.591
	SRR8316905	Silver flowering stage	5.017
	SRR8316906	Gold flowering stage	16.956
	SRR8316907	Gold flowering stage	16.012
	SRR8316908	Gold flowering stage	15.078
SRP132670	SRR6706286	Control	15.969
	SRR6706287	Light intensity 50%	18.276
	SRR6706288	Light intensity 20%	19.444
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	8.088
	CNS0095593	Slightly white alabastrum(diploid) 2	6.378
	CNS0095594	Slightly white alabastrum(diploid) 3	7.503
	CNS0095595	Whole white alabastrum(diploid) 2	7.039
	CNS0095596	Whole white alabastrum(diploid) 3	5.895
	CNS0095597	Whole white alabastrum(diploid) 4	6.676
	CNS0095598	Silvery flower (diploied) 1	9.173
	CNS0095599	Silvery flower (diploied) 2	7.760
	CNS0095600	Silvery flower (diploied) 3	21.278
	CNS0095601	Golden flower (diploid) 1	7.687
	CNS0095602	Golden flower (diploid) 2	19.353
	CNS0095603	Golden flower (diploid) 3	19.441
	CNS0095604	Slightly white alabastrum(tetraploid) 1	10.001
	CNS0095605	Slightly white alabastrum(tetraploid) 2	7.921
	CNS0095606	Slightly white alabastrum(tetraploid) 3	16.463
	CNS0095607	Whole white alabastrum(tetraploid) 1	7.576
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.622
	CNS0095609	Whole white alabastrum(tetraploid) 3	13.445
	CNS0095610	Silvery flower (diploied) 1	19.905
	CNS0095611	Silvery flower (diploied) 2	19.372
	CNS0095612	Silvery flower (diploied) 3	16.532
	CNS0095613	Golden flower (tetraploid) 1	5.349
	CNS0095614	Golden flower (tetraploid) 2	13.348
	CNS0095615	Golden flower (tetraploid) 3	19.917
CRA001975	CRR073297	Stem 1	17.188
	CRR073298	Stem 2	15.827
	CRR073299	Stem 3	9.521
	CRR073300	Leaf 1	16.799
	CRR073301	Leaf 2	12.921
	CRR073302	Leaf 3	8.360
	CRR073303	Juvenile bud 1	9.578
	CRR073304	Juvenile bud 2	6.096
	CRR073305	Juvenile bud 3	18.761
	CRR073306	Third green 1	6.411
	CRR073307	Third green 2	3.314
	CRR073308	Third green 3	6.888
	CRR073309	Second white 1	3.984
	CRR073310	Second white 2	6.514
	CRR073311	Second white 3	10.998
	CRR073312	Silver flowering 1	9.407
	CRR073313	Silver flowering 2	10.113
	CRR073314	Silver flowering 3	8.433
	CRR073315	Gold flowering 1	2.930
	CRR073316	Gold flowering 2	8.046
	CRR073317	Gold flowering 3	4.415
	CRR073318	Tawny withering 1	10.898
	CRR073319	Tawny withering 2	7.560
	CRR073320	Tawny withering 3	7.203