Gene detail

Detail information of GWHGAAZE003046

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009623637.1	0	PREDICTED: cytochrome P450 86B1-like [Nicotiana tomentosiformis]
COG	YP_005441205.1	2E-33	cytochrome P450
Swissprot	tr\|Q9FVS9\|C96AF_ARATH	8E-155	Alkane hydroxylase MAH1 {ECO:0000303\|PubMed:17905869}
trEMBL	tr\|M1DJX5\|M1DJX5_SOLTU	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400090220}
TAIR10	AT2G23180.1	1E-148	cytochrome P450, family 96, subfamily A, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	90829752	90831287	+
GWHAAZE00000001	mRNA	90829752	90831287	+
GWHAAZE00000001	exon	90829752	90831287	+
GWHAAZE00000001	CDS	90829752	90831287	+

Transcript Sequence
>GWHTAAZE003050 ATGGCCATCACTTTATACCTAGAGATACTCTTATTCCTACTCTTCTCCTCTCTTCTTTACTGCTGGAGTGCTTGCAGAAGGAGCACTCCCCATCGAAGCTCAGTGCCGACAAATTGGCCTCTCGTTGGCATGATACCGGGGCTTCTACGAAATGCCCATCGCATCCATGAATTTATAACTGATATCCTCAAAGAAACAGGAGGAACCTTTGCTTTTAAAGGCCCTTGCTTTGCTAACTTGGACATGCTGATCACTGCTAATCCTGCTAACATCCACCATATCTTGAGCAGGAACTTTTCTAACTACCCAAAAGGCCCCGCATTCAGAAAGATTTTCGATATCCTAGGAGACGGGATTTTCAATGCCGATTCCAAATTGTGGACAATTCACCGAAAGACTGCTCTTTTGCTGATGAATCATGCCGAGTTCCAAGATTTGTTGGAGACAATTATCTGGCGCAAGATCAAAAAGGGGTTACTTCCAGTTCTTGAACGTGTTTGTGAAAAAGCAACAGAGTTGGATTTGCAGGATATTTTTCAGAGGTTCACTTTTGATACCAGCTGTTCCTTGTTTCGAGACTACGATCCACTAAGCCTCTCCATGGATTTACCTCATATAGAATGTGAAAAGGCATTCAGTAATTTGACGGAGGCGTTACTGTATAGGCACATACTGCCGGAAGGCTGCTGGAAGTTGCAGAAAAAGCTTGGAGTTGGTAAAGAGAAGAAGCTGAGCAAAGCTTGGGAGAGTTTTGATCAATTCATATATCACTGTATATCATTGAAGCAAAGTAGAAGTAAGGACCAAGATGAAATGGGTTTTGAGTCTTTTAACTTGTTAACATCTCACATGAAAGCATACACGGGAGAGGGTGGTACTTCTGGTGACCCCAACAAGTTGTTGAGGGACACCTTGTTGAGTTTTATATTTGCAGGGAGAGACACAACAAGCACAGCTCTCACTTGGTTCTTTTGGCTCCTAGCAACAAATCCATTAGTTGACATCAAGATTCAAGATGAGATCAAGACCACAGTGAACTTCAAAGAGGAAGAAAAATGGAGTTTTTTTAAGGCAGAGGAGTTGCACAAGCTTGTTTATCTTCATGGAGCTTTGTGTGAAACTTTGAGGCTATACCCACCAGTTTCATTAAATCACAAAGCTCCAGTTCAACAAGACACACTTCCAAGTGGTCATTGGATTGACCGAAACACAAAAATGGTGTTATGTTTCTATTCAATGGGAAGAATGGAGACAATATGGGGCAAAGATTGCTTAGAGTTCAAGCCGGAGAGATGGATTTCAGAGAGAGGAGGGATCAAACACGAAGCGTCTTTCAATTTTCCAGCGTTTAATGCAGGTCCAAGGAGTTGTATAGGTAAGGACATGAGTTTCACACAAATGAAAATAGTTGCCACCACCATTATACATAATTACAAAGTCGAAGTGGTTAAAGGTCATTCAATAACCCCGAGTGATTCAATTATACTTCAAATGAAACATGGTTTGAAGGTCAAGCTTACCAAAAGAAGTGTTTAG

Network for GWHGAAZE003046

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	35	505	2.00E-61

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.108
	SRR3591707	mature leaf	0.105
	SRR3591708	Shoot apex	0.215
	SRR3591709	Stem	0.165
	SRR3591710	White floral bud	0.554
	SRR3591711	White flower	0.094
	SRR3591712	Green floral bud	1.350
	SRR3591713	Yellow flower	0.021
SRP173429	SRR8316895	Juvenile bud stage	2.589
	SRR8316896	Juvenile bud stage	1.725
	SRR8316897	Juvenile bud stage	0.420
	SRR8316894	Third green stage	0.605
	SRR8316900	Third green stage	1.331
	SRR8316901	Third green stage	0.822
	SRR8316898	Complete white stage	0.284
	SRR8316899	Complete white stage	0.546
	SRR8316903	Complete white stage	0.391
	SRR8316902	Silver flowering stage	0.308
	SRR8316904	Silver flowering stage	0.210
	SRR8316905	Silver flowering stage	0.138
	SRR8316906	Gold flowering stage	0.103
	SRR8316907	Gold flowering stage	0.399
	SRR8316908	Gold flowering stage	0.328
SRP132670	SRR6706286	Control	1.457
	SRR6706287	Light intensity 50%	1.062
	SRR6706288	Light intensity 20%	1.441
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.566
	CNS0095593	Slightly white alabastrum(diploid) 2	0.367
	CNS0095594	Slightly white alabastrum(diploid) 3	0.303
	CNS0095595	Whole white alabastrum(diploid) 2	0.230
	CNS0095596	Whole white alabastrum(diploid) 3	0.263
	CNS0095597	Whole white alabastrum(diploid) 4	0.087
	CNS0095598	Silvery flower (diploied) 1	0.457
	CNS0095599	Silvery flower (diploied) 2	0.139
	CNS0095600	Silvery flower (diploied) 3	1.153
	CNS0095601	Golden flower (diploid) 1	0.566
	CNS0095602	Golden flower (diploid) 2	0.529
	CNS0095603	Golden flower (diploid) 3	0.636
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.371
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.969
	CNS0095606	Slightly white alabastrum(tetraploid) 3	3.665
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.745
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.215
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.017
	CNS0095610	Silvery flower (diploied) 1	0.198
	CNS0095611	Silvery flower (diploied) 2	0.323
	CNS0095612	Silvery flower (diploied) 3	0.045
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.180
	CNS0095615	Golden flower (tetraploid) 3	0.139
CRA001975	CRR073297	Stem 1	0.775
	CRR073298	Stem 2	0.931
	CRR073299	Stem 3	1.020
	CRR073300	Leaf 1	0.357
	CRR073301	Leaf 2	0.453
	CRR073302	Leaf 3	0.236
	CRR073303	Juvenile bud 1	0.355
	CRR073304	Juvenile bud 2	0.024
	CRR073305	Juvenile bud 3	0.524
	CRR073306	Third green 1	0.047
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.005
	CRR073310	Second white 2	0.017
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.057
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.255
	CRR073316	Gold flowering 2	0.423
	CRR073317	Gold flowering 3	0.325
	CRR073318	Tawny withering 1	0.019
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.054