Detail information of GWHGAAZE003221


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010658537.10PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [Vitis vinifera]
COGYP_002248472.10phosphoribosylformylglycinamidine synthase
Swissprottr|Q9M8D3|PUR4_ARATH0Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|M1AN98|M1AN98_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400026512}
TAIR10AT1G74260.10purine biosynthesis 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9416188194176817-
GWHAAZE00000001mRNA9416188194176817-
GWHAAZE00000001exon9416188194162332-
GWHAAZE00000001exon9416240894162428-
GWHAAZE00000001exon9416260794162888-
GWHAAZE00000001exon9416318894163585-
GWHAAZE00000001exon9416366494163749-
GWHAAZE00000001exon9416392494164029-
GWHAAZE00000001exon9416416994164515-
GWHAAZE00000001exon9416563894165685-
GWHAAZE00000001exon9417004594170135-
GWHAAZE00000001exon9417248594176686-
GWHAAZE00000001exon9417677694176817-
GWHAAZE00000001CDS9417677694176817-
GWHAAZE00000001CDS9417248594176686-
GWHAAZE00000001CDS9417004594170135-
GWHAAZE00000001CDS9416563894165685-
GWHAAZE00000001CDS9416416994164515-
GWHAAZE00000001CDS9416392494164029-
GWHAAZE00000001CDS9416366494163749-
GWHAAZE00000001CDS9416318894163585-
GWHAAZE00000001CDS9416260794162888-
GWHAAZE00000001CDS9416240894162428-
GWHAAZE00000001CDS9416221794162332-
GWHAAZE00000001three_prime_UTR9416188194162216-
Transcript Sequence

Network for GWHGAAZE003221

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF18076.2FGAR-AT_N1252455.90E-18
PF18072.2FGAR-AT_linker2723212.00E-11
PF02769.23AIRS_C5356871.30E-22
PF02769.23AIRS_C94410744.30E-15
PF13507.7GATase_5114214115.00E-106
PF00004.30AAA161917601.10E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01952PFAS, purL Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Purine metabolismmap00230

Gene Ontology

GO term OntologyName
GO:0006189biological_process'de novo' IMP biosynthetic process
GO:0004642molecular_functionphosphoribosylformylglycinamidine synthase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.029
SRR3591706second leaf212.467
SRR3591707mature leaf1230.714
SRR3591708Shoot apex40.079
SRR3591709Stem18.731
SRR3591710White floral bud7.125
SRR3591711White flower17.657
SRR3591712Green floral bud11.840
SRR3591713Yellow flower7.965
SRP173429 SRR8316895Juvenile bud stage 55.952
SRR8316896Juvenile bud stage 60.425
SRR8316897Juvenile bud stage 31.552
SRR8316894Third green stage 11.669
SRR8316900Third green stage 27.830
SRR8316901Third green stage 18.368
SRR8316898Complete white stage 3.053
SRR8316899Complete white stage 18.287
SRR8316903Complete white stage 8.503
SRR8316902Silver flowering stage4.066
SRR8316904Silver flowering stage4.030
SRR8316905Silver flowering stage2.349
SRR8316906Gold flowering stage 8.820
SRR8316907Gold flowering stage 8.985
SRR8316908Gold flowering stage 7.703
SRP132670SRR6706286Control68.644
SRR6706287Light intensity 50%48.598
SRR6706288Light intensity 20%46.533
CNP0000432CNS0095592Slightly white alabastrum(diploid) 132.112
CNS0095593Slightly white alabastrum(diploid) 217.828
CNS0095594Slightly white alabastrum(diploid) 328.695
CNS0095595Whole white alabastrum(diploid) 216.671
CNS0095596Whole white alabastrum(diploid) 314.047
CNS0095597Whole white alabastrum(diploid) 415.201
CNS0095598Silvery flower (diploied) 160.942
CNS0095599Silvery flower (diploied) 290.037
CNS0095600Silvery flower (diploied) 332.592
CNS0095601Golden flower (diploid) 1101.027
CNS0095602Golden flower (diploid) 271.810
CNS0095603Golden flower (diploid) 369.552
CNS0095604Slightly white alabastrum(tetraploid) 124.209
CNS0095605Slightly white alabastrum(tetraploid) 229.876
CNS0095606Slightly white alabastrum(tetraploid) 354.995
CNS0095607Whole white alabastrum(tetraploid) 112.587
CNS0095608Whole white alabastrum(tetraploid) 27.987
CNS0095609Whole white alabastrum(tetraploid) 325.548
CNS0095610Silvery flower (diploied) 133.393
CNS0095611Silvery flower (diploied) 245.042
CNS0095612Silvery flower (diploied) 39.170
CNS0095613Golden flower (tetraploid) 132.130
CNS0095614Golden flower (tetraploid) 243.299
CNS0095615Golden flower (tetraploid) 35.417
CRA001975CRR073297Stem 115.371
CRR073298Stem 214.588
CRR073299Stem 314.011
CRR073300Leaf 114.824
CRR073301Leaf 213.678
CRR073302Leaf 313.280
CRR073303Juvenile bud 116.024
CRR073304Juvenile bud 210.985
CRR073305Juvenile bud 315.989
CRR073306Third green 13.773
CRR073307Third green 22.606
CRR073308Third green 33.100
CRR073309Second white 14.957
CRR073310Second white 23.856
CRR073311Second white 33.618
CRR073312Silver flowering 12.492
CRR073313Silver flowering 23.780
CRR073314Silver flowering 32.786
CRR073315Gold flowering 1228.484
CRR073316Gold flowering 2285.197
CRR073317Gold flowering 3185.907
CRR073318Tawny withering 18.017
CRR073319Tawny withering 26.450
CRR073320Tawny withering 36.123