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Detail information of GWHGAAZE003897
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002319181.2
2.03309E-68
hypothetical protein POPTR_0013s05920g [Populus trichocarpa]
Swissprot
tr|Q6ID70|Y3377_ARATH
5E-60
Uncharacterized protein At3g03773
trEMBL
tr|B9I621|B9I621_POPTR
8E-69
Uncharacterized protein {ECO:0000313|EMBL:EEE95104.2}
TAIR10
AT3G03773.2
3E-48
HSP20-like chaperones superfamily protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
106674437
106681318
-
GWHAAZE00000001
mRNA
106674437
106681318
-
GWHAAZE00000001
exon
106681227
106681318
-
GWHAAZE00000001
exon
106680633
106680816
-
GWHAAZE00000001
exon
106674437
106674628
-
GWHAAZE00000001
CDS
106681227
106681318
-
GWHAAZE00000001
CDS
106680633
106680816
-
GWHAAZE00000001
CDS
106674437
106674628
-
Transcript Sequence
>GWHTAAZE003903 ATGGTGATGTTGGGCAAGTCTATGGAAAAGGCGATGATAGTAAAGTGGGATGCTAGCGGATTGAAGCGTTTTAGGGGAGTTGGTGCACACATTCGCCATCCAGAGGTTCTTTGGGCTCAACGTTCTGATAAGGTTTATCTGACCATTGCTTTACCAGACGCACACAATGTATCTGTAAAGTGCGAGCCTGAAGGGTTATTTAGTTTCTCTGCAGTGGGGGTGCAAGGTGAAACCTTTGACGTCAGTTTGGAACTTTACGGGAGAATTGTGCCTGAGGGTTGTAAAACTAATGTTGGGTTGCGGAACATACTATGCTCGATTCAAAAGGAGGAGAAGGGTTGGTGGAAAAGAATATTAAAGTCAGAAGAGAAACCTGCTCCATTCCTTAAGGTTGATTGGAACAAATGGTGTGATGAGGATGAAGAGCCGACTAATTGTAAGTCCCCTTCCATTTTAGTGGGCGTTTGA
Network for GWHGAAZE003897
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
CFinderModule0031
GO:0006413 translational initiation GOslim:biological_process
Transcription factor Others family Transcription factor Others
GO:0003743 translation initiation factor activity GOslim:molecular_function
map04712 Circadian rhythm - plant
map03013 RNA transport
CFinderModule0277
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF04969.17
CS
36
109
3.90E-07
Protein Sequence
>GWHPAAZE003900 MVMLGKSMEKAMIVKWDASGLKRFRGVGAHIRHPEVLWAQRSDKVYLTIALPDAHNVSVKCEPEGLFSFSAVGVQGETFDVSLELYGRIVPEGCKTNVGLRNILCSIQKEEKGWWKRILKSEEKPAPFLKVDWNKWCDEDEEPTNCKSPSILVGV
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
32.485
SRR3591706
second leaf
14.164
SRR3591707
mature leaf
20.495
SRR3591708
Shoot apex
26.621
SRR3591709
Stem
42.518
SRR3591710
White floral bud
38.453
SRR3591711
White flower
47.744
SRR3591712
Green floral bud
35.354
SRR3591713
Yellow flower
26.248
SRP173429
SRR8316895
Juvenile bud stage
19.599
SRR8316896
Juvenile bud stage
28.600
SRR8316897
Juvenile bud stage
10.976
SRR8316894
Third green stage
11.902
SRR8316900
Third green stage
34.078
SRR8316901
Third green stage
32.099
SRR8316898
Complete white stage
13.400
SRR8316899
Complete white stage
62.214
SRR8316903
Complete white stage
20.674
SRR8316902
Silver flowering stage
11.239
SRR8316904
Silver flowering stage
16.839
SRR8316905
Silver flowering stage
8.420
SRR8316906
Gold flowering stage
21.269
SRR8316907
Gold flowering stage
26.958
SRR8316908
Gold flowering stage
23.330
SRP132670
SRR6706286
Control
32.318
SRR6706287
Light intensity 50%
35.973
SRR6706288
Light intensity 20%
38.703
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
29.008
CNS0095593
Slightly white alabastrum(diploid) 2
41.220
CNS0095594
Slightly white alabastrum(diploid) 3
34.232
CNS0095595
Whole white alabastrum(diploid) 2
27.237
CNS0095596
Whole white alabastrum(diploid) 3
24.999
CNS0095597
Whole white alabastrum(diploid) 4
28.078
CNS0095598
Silvery flower (diploied) 1
37.125
CNS0095599
Silvery flower (diploied) 2
25.610
CNS0095600
Silvery flower (diploied) 3
33.275
CNS0095601
Golden flower (diploid) 1
36.842
CNS0095602
Golden flower (diploid) 2
31.257
CNS0095603
Golden flower (diploid) 3
30.425
CNS0095604
Slightly white alabastrum(tetraploid) 1
33.168
CNS0095605
Slightly white alabastrum(tetraploid) 2
29.512
CNS0095606
Slightly white alabastrum(tetraploid) 3
45.952
CNS0095607
Whole white alabastrum(tetraploid) 1
23.307
CNS0095608
Whole white alabastrum(tetraploid) 2
25.111
CNS0095609
Whole white alabastrum(tetraploid) 3
31.102
CNS0095610
Silvery flower (diploied) 1
42.396
CNS0095611
Silvery flower (diploied) 2
37.621
CNS0095612
Silvery flower (diploied) 3
28.782
CNS0095613
Golden flower (tetraploid) 1
24.521
CNS0095614
Golden flower (tetraploid) 2
30.360
CNS0095615
Golden flower (tetraploid) 3
19.447
CRA001975
CRR073297
Stem 1
25.018
CRR073298
Stem 2
26.040
CRR073299
Stem 3
29.659
CRR073300
Leaf 1
24.422
CRR073301
Leaf 2
29.652
CRR073302
Leaf 3
20.956
CRR073303
Juvenile bud 1
21.180
CRR073304
Juvenile bud 2
18.443
CRR073305
Juvenile bud 3
25.976
CRR073306
Third green 1
7.877
CRR073307
Third green 2
6.213
CRR073308
Third green 3
6.645
CRR073309
Second white 1
8.249
CRR073310
Second white 2
4.682
CRR073311
Second white 3
3.743
CRR073312
Silver flowering 1
3.285
CRR073313
Silver flowering 2
4.835
CRR073314
Silver flowering 3
8.256
CRR073315
Gold flowering 1
20.882
CRR073316
Gold flowering 2
22.714
CRR073317
Gold flowering 3
16.588
CRR073318
Tawny withering 1
24.327
CRR073319
Tawny withering 2
28.731
CRR073320
Tawny withering 3
36.872