Detail information of GWHGAAZE004921


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006438889.14.40401E-20hypothetical protein CICLE_v10032728mg [Citrus clementina]
trEMBLtr|V4TKJ5|V4TKJ5_9ROSI2E-20Uncharacterized protein {ECO:0000313|EMBL:ESR52130.1}
TAIR10AT1G34570.10.003Essential protein Yae1, N-terminal

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene124468517124468789+
GWHAAZE00000001mRNA124468517124468789+
GWHAAZE00000001exon124468517124468789+
GWHAAZE00000001CDS124468517124468789+
Transcript Sequence

Network for GWHGAAZE004921

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.856
SRR3591706second leaf0.453
SRR3591707mature leaf0.763
SRR3591708Shoot apex1.785
SRR3591709Stem0.646
SRR3591710White floral bud17.483
SRR3591711White flower11.445
SRR3591712Green floral bud16.388
SRR3591713Yellow flower12.876
SRP173429 SRR8316895Juvenile bud stage 35.047
SRR8316896Juvenile bud stage 51.041
SRR8316897Juvenile bud stage 12.448
SRR8316894Third green stage 20.615
SRR8316900Third green stage 44.232
SRR8316901Third green stage 50.552
SRR8316898Complete white stage 12.686
SRR8316899Complete white stage 64.039
SRR8316903Complete white stage 29.385
SRR8316902Silver flowering stage13.198
SRR8316904Silver flowering stage20.493
SRR8316905Silver flowering stage9.346
SRR8316906Gold flowering stage 21.489
SRR8316907Gold flowering stage 30.433
SRR8316908Gold flowering stage 19.161
SRP132670SRR6706286Control18.261
SRR6706287Light intensity 50%23.349
SRR6706288Light intensity 20%22.306
CNP0000432CNS0095592Slightly white alabastrum(diploid) 184.861
CNS0095593Slightly white alabastrum(diploid) 276.829
CNS0095594Slightly white alabastrum(diploid) 369.849
CNS0095595Whole white alabastrum(diploid) 260.706
CNS0095596Whole white alabastrum(diploid) 355.408
CNS0095597Whole white alabastrum(diploid) 450.357
CNS0095598Silvery flower (diploied) 162.610
CNS0095599Silvery flower (diploied) 246.819
CNS0095600Silvery flower (diploied) 317.234
CNS0095601Golden flower (diploid) 149.549
CNS0095602Golden flower (diploid) 221.141
CNS0095603Golden flower (diploid) 324.751
CNS0095604Slightly white alabastrum(tetraploid) 168.815
CNS0095605Slightly white alabastrum(tetraploid) 264.462
CNS0095606Slightly white alabastrum(tetraploid) 358.934
CNS0095607Whole white alabastrum(tetraploid) 150.518
CNS0095608Whole white alabastrum(tetraploid) 235.537
CNS0095609Whole white alabastrum(tetraploid) 327.464
CNS0095610Silvery flower (diploied) 136.430
CNS0095611Silvery flower (diploied) 231.147
CNS0095612Silvery flower (diploied) 326.814
CNS0095613Golden flower (tetraploid) 133.360
CNS0095614Golden flower (tetraploid) 225.551
CNS0095615Golden flower (tetraploid) 320.967
CRA001975CRR073297Stem 138.989
CRR073298Stem 231.232
CRR073299Stem 38.615
CRR073300Leaf 131.418
CRR073301Leaf 234.920
CRR073302Leaf 35.678
CRR073303Juvenile bud 16.834
CRR073304Juvenile bud 23.061
CRR073305Juvenile bud 37.226
CRR073306Third green 11.036
CRR073307Third green 20.603
CRR073308Third green 31.803
CRR073309Second white 10.652
CRR073310Second white 22.530
CRR073311Second white 32.235
CRR073312Silver flowering 10.979
CRR073313Silver flowering 21.399
CRR073314Silver flowering 30.834
CRR073315Gold flowering 13.618
CRR073316Gold flowering 29.887
CRR073317Gold flowering 32.837
CRR073318Tawny withering 18.911
CRR073319Tawny withering 221.362
CRR073320Tawny withering 38.189