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Detail information of GWHGAAZE004921
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_006438889.1
4.40401E-20
hypothetical protein CICLE_v10032728mg [Citrus clementina]
trEMBL
tr|V4TKJ5|V4TKJ5_9ROSI
2E-20
Uncharacterized protein {ECO:0000313|EMBL:ESR52130.1}
TAIR10
AT1G34570.1
0.003
Essential protein Yae1, N-terminal
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
124468517
124468789
+
GWHAAZE00000001
mRNA
124468517
124468789
+
GWHAAZE00000001
exon
124468517
124468789
+
GWHAAZE00000001
CDS
124468517
124468789
+
Transcript Sequence
>GWHTAAZE004927 ATGCTTGAAACGGAGGCAAAGAGAAACGAGTTCCACAAATTGTATGAGTCTATGCATTCTCTTTCTACCGCAGACGCACTAAGGTTATTCCATGCTGATCTCTCCAAAAATTTGGTAAATAATAGCGATAGTTCCGAGCCCAGCTCCCCTAAAGTAGTAGATTTGGATGTTCAGAGCTCTGACGGTAGTCCTCTGAAAAAGTACCATGGGGAGCTTCAGTCACTTATTGGTGACACTCCTGCAGTCAAGGTGCATTTTGAAATGGATCCATAG
Network for GWHGAAZE004921
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
--
--
--
--
--
Protein Sequence
>GWHPAAZE004924 MLETEAKRNEFHKLYESMHSLSTADALRLFHADLSKNLVNNSDSSEPSSPKVVDLDVQSSDGSPLKKYHGELQSLIGDTPAVKVHFEMDP
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
0.856
SRR3591706
second leaf
0.453
SRR3591707
mature leaf
0.763
SRR3591708
Shoot apex
1.785
SRR3591709
Stem
0.646
SRR3591710
White floral bud
17.483
SRR3591711
White flower
11.445
SRR3591712
Green floral bud
16.388
SRR3591713
Yellow flower
12.876
SRP173429
SRR8316895
Juvenile bud stage
35.047
SRR8316896
Juvenile bud stage
51.041
SRR8316897
Juvenile bud stage
12.448
SRR8316894
Third green stage
20.615
SRR8316900
Third green stage
44.232
SRR8316901
Third green stage
50.552
SRR8316898
Complete white stage
12.686
SRR8316899
Complete white stage
64.039
SRR8316903
Complete white stage
29.385
SRR8316902
Silver flowering stage
13.198
SRR8316904
Silver flowering stage
20.493
SRR8316905
Silver flowering stage
9.346
SRR8316906
Gold flowering stage
21.489
SRR8316907
Gold flowering stage
30.433
SRR8316908
Gold flowering stage
19.161
SRP132670
SRR6706286
Control
18.261
SRR6706287
Light intensity 50%
23.349
SRR6706288
Light intensity 20%
22.306
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
84.861
CNS0095593
Slightly white alabastrum(diploid) 2
76.829
CNS0095594
Slightly white alabastrum(diploid) 3
69.849
CNS0095595
Whole white alabastrum(diploid) 2
60.706
CNS0095596
Whole white alabastrum(diploid) 3
55.408
CNS0095597
Whole white alabastrum(diploid) 4
50.357
CNS0095598
Silvery flower (diploied) 1
62.610
CNS0095599
Silvery flower (diploied) 2
46.819
CNS0095600
Silvery flower (diploied) 3
17.234
CNS0095601
Golden flower (diploid) 1
49.549
CNS0095602
Golden flower (diploid) 2
21.141
CNS0095603
Golden flower (diploid) 3
24.751
CNS0095604
Slightly white alabastrum(tetraploid) 1
68.815
CNS0095605
Slightly white alabastrum(tetraploid) 2
64.462
CNS0095606
Slightly white alabastrum(tetraploid) 3
58.934
CNS0095607
Whole white alabastrum(tetraploid) 1
50.518
CNS0095608
Whole white alabastrum(tetraploid) 2
35.537
CNS0095609
Whole white alabastrum(tetraploid) 3
27.464
CNS0095610
Silvery flower (diploied) 1
36.430
CNS0095611
Silvery flower (diploied) 2
31.147
CNS0095612
Silvery flower (diploied) 3
26.814
CNS0095613
Golden flower (tetraploid) 1
33.360
CNS0095614
Golden flower (tetraploid) 2
25.551
CNS0095615
Golden flower (tetraploid) 3
20.967
CRA001975
CRR073297
Stem 1
38.989
CRR073298
Stem 2
31.232
CRR073299
Stem 3
8.615
CRR073300
Leaf 1
31.418
CRR073301
Leaf 2
34.920
CRR073302
Leaf 3
5.678
CRR073303
Juvenile bud 1
6.834
CRR073304
Juvenile bud 2
3.061
CRR073305
Juvenile bud 3
7.226
CRR073306
Third green 1
1.036
CRR073307
Third green 2
0.603
CRR073308
Third green 3
1.803
CRR073309
Second white 1
0.652
CRR073310
Second white 2
2.530
CRR073311
Second white 3
2.235
CRR073312
Silver flowering 1
0.979
CRR073313
Silver flowering 2
1.399
CRR073314
Silver flowering 3
0.834
CRR073315
Gold flowering 1
3.618
CRR073316
Gold flowering 2
9.887
CRR073317
Gold flowering 3
2.837
CRR073318
Tawny withering 1
8.911
CRR073319
Tawny withering 2
21.362
CRR073320
Tawny withering 3
8.189