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Detail information of GWHGAAZE005151
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002269135.1
4.7524E-99
PREDICTED: transcription repressor OFP13 [Vitis vinifera]
Swissprot
tr|Q9FMC8|OPF13_ARATH
9E-64
Transcription repressor OFP13
trEMBL
tr|D7T3D6|D7T3D6_VITVI
2E-99
Putative uncharacterized protein {ECO:0000313|EMBL:CBI25021.3}
TAIR10
AT5G04820.1
2E-31
ovate family protein 13
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000002
gene
3440665
3441360
+
GWHAAZE00000002
mRNA
3440665
3441360
+
GWHAAZE00000002
exon
3440665
3441360
+
GWHAAZE00000002
CDS
3440665
3441360
+
Transcript Sequence
>GWHTAAZE005157 ATGGGCAAGAAAATGAAGCTCCCTTCTCTGTTCAAGAACAAAGAAACTGTGCACCAGTGGCAATGGCCTTCATGCAAGCACCCAAAGACCCTTTCGTTTCGAGCCAGTGATGACATGTTCAAGACAGTTAACTCGGTCTTTTTCGACCCCTCAGATGGGCTCCAAACGCCCGAGTCATTGTTTACAAGCTCGTCGGAATCTAGAAGCTTCTCGAGTGAATCAGAGTGCACGGGAGGAGATCAGTCACTAGAGATGATCATACGCGGGGTCAGATCAGAGAGGCTGTTCTTCGATCCCGGCAACACGAGCTCAATCTTGGAGGTGGCTAAAACTGGAGAGGAATTGCCGTTTAAGGAAAGTGTGGTGTTAGCAATGGAGTCTGAGGATCCTTATGTGGACTTCAAGAGGTCAATGGAGGAGATGGTGGAGAGTCATGGATTGAAAGAATGGGAAGGTTTGGAAGAGTTGTTGGGTTGGTACTTGAAAATGAATGGACAAATTAATCATGGGTTTATAGTTGGAGCCTTTGTTGACTTGCTTGTTGGGCTTGGCTCAGCTCCCTTTCCTTCGGATTCTACTACTACTACATTTTCTTCTGCGGCTTCTTCTTTCTCTTCTCCATCTTCTCCTCTATCTCCCCTAGGTAATAACCAGGAGATCCATGAGGAAGAAGAAAAGATGGTAATAACGTCTTAG
Network for GWHGAAZE005151
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF04844.14
Ovate
127
183
1.50E-23
Protein Sequence
>GWHPAAZE005154 MGKKMKLPSLFKNKETVHQWQWPSCKHPKTLSFRASDDMFKTVNSVFFDPSDGLQTPESLFTSSSESRSFSSESECTGGDQSLEMIIRGVRSERLFFDPGNTSSILEVAKTGEELPFKESVVLAMESEDPYVDFKRSMEEMVESHGLKEWEGLEELLGWYLKMNGQINHGFIVGAFVDLLVGLGSAPFPSDSTTTTFSSAASSFSSPSSPLSPLGNNQEIHEEEEKMVITS
Gene family
Gene family
subfamily
Transcription Factors Family
OFP
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
21.646
SRR3591706
second leaf
22.766
SRR3591707
mature leaf
3.405
SRR3591708
Shoot apex
11.434
SRR3591709
Stem
3.678
SRR3591710
White floral bud
8.960
SRR3591711
White flower
4.039
SRR3591712
Green floral bud
10.880
SRR3591713
Yellow flower
0.680
SRP173429
SRR8316895
Juvenile bud stage
3.207
SRR8316896
Juvenile bud stage
1.577
SRR8316897
Juvenile bud stage
1.846
SRR8316894
Third green stage
2.119
SRR8316900
Third green stage
5.291
SRR8316901
Third green stage
4.714
SRR8316898
Complete white stage
1.747
SRR8316899
Complete white stage
5.149
SRR8316903
Complete white stage
2.306
SRR8316902
Silver flowering stage
0.000
SRR8316904
Silver flowering stage
0.321
SRR8316905
Silver flowering stage
0.088
SRR8316906
Gold flowering stage
0.000
SRR8316907
Gold flowering stage
0.000
SRR8316908
Gold flowering stage
0.082
SRP132670
SRR6706286
Control
3.369
SRR6706287
Light intensity 50%
4.073
SRR6706288
Light intensity 20%
4.287
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
2.988
CNS0095593
Slightly white alabastrum(diploid) 2
7.063
CNS0095594
Slightly white alabastrum(diploid) 3
3.275
CNS0095595
Whole white alabastrum(diploid) 2
3.533
CNS0095596
Whole white alabastrum(diploid) 3
6.489
CNS0095597
Whole white alabastrum(diploid) 4
3.847
CNS0095598
Silvery flower (diploied) 1
2.530
CNS0095599
Silvery flower (diploied) 2
1.034
CNS0095600
Silvery flower (diploied) 3
0.654
CNS0095601
Golden flower (diploid) 1
3.946
CNS0095602
Golden flower (diploid) 2
0.726
CNS0095603
Golden flower (diploid) 3
1.105
CNS0095604
Slightly white alabastrum(tetraploid) 1
9.631
CNS0095605
Slightly white alabastrum(tetraploid) 2
6.248
CNS0095606
Slightly white alabastrum(tetraploid) 3
12.723
CNS0095607
Whole white alabastrum(tetraploid) 1
5.551
CNS0095608
Whole white alabastrum(tetraploid) 2
3.477
CNS0095609
Whole white alabastrum(tetraploid) 3
5.133
CNS0095610
Silvery flower (diploied) 1
0.312
CNS0095611
Silvery flower (diploied) 2
0.492
CNS0095612
Silvery flower (diploied) 3
1.229
CNS0095613
Golden flower (tetraploid) 1
0.000
CNS0095614
Golden flower (tetraploid) 2
0.111
CNS0095615
Golden flower (tetraploid) 3
0.189
CRA001975
CRR073297
Stem 1
2.445
CRR073298
Stem 2
3.242
CRR073299
Stem 3
3.828
CRR073300
Leaf 1
5.808
CRR073301
Leaf 2
5.127
CRR073302
Leaf 3
6.989
CRR073303
Juvenile bud 1
6.137
CRR073304
Juvenile bud 2
5.221
CRR073305
Juvenile bud 3
5.926
CRR073306
Third green 1
0.295
CRR073307
Third green 2
1.609
CRR073308
Third green 3
0.584
CRR073309
Second white 1
0.000
CRR073310
Second white 2
0.000
CRR073311
Second white 3
0.077
CRR073312
Silver flowering 1
0.000
CRR073313
Silver flowering 2
0.000
CRR073314
Silver flowering 3
0.000
CRR073315
Gold flowering 1
0.298
CRR073316
Gold flowering 2
0.000
CRR073317
Gold flowering 3
0.301
CRR073318
Tawny withering 1
0.081
CRR073319
Tawny withering 2
0.000
CRR073320
Tawny withering 3
0.000