Gene detail

Detail information of GWHGAAZE005571

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU41674.1	0	hypothetical protein MIMGU_mgv1a006695mg [Erythranthe guttata]
Swissprot	tr\|P51566\|AFC1_ARATH	0	Serine/threonine-protein kinase AFC1
trEMBL	tr\|A0A022RNN4\|A0A022RNN4_ERYGU	0	Uncharacterized protein {ECO:0000313\|EMBL:EYU41674.1}
TAIR10	AT3G53570.4	1E-180	FUS3-complementing gene 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	10140949	10145889	+
GWHAAZE00000002	mRNA	10140949	10145889	+
GWHAAZE00000002	exon	10140949	10141141	+
GWHAAZE00000002	exon	10141297	10141323	+
GWHAAZE00000002	exon	10141488	10141641	+
GWHAAZE00000002	exon	10141725	10141773	+
GWHAAZE00000002	exon	10141896	10142010	+
GWHAAZE00000002	exon	10142217	10142308	+
GWHAAZE00000002	exon	10143396	10143552	+
GWHAAZE00000002	exon	10143856	10143920	+
GWHAAZE00000002	exon	10143981	10144054	+
GWHAAZE00000002	exon	10145321	10145426	+
GWHAAZE00000002	exon	10145731	10145889	+
GWHAAZE00000002	CDS	10140949	10141141	+
GWHAAZE00000002	CDS	10141297	10141323	+
GWHAAZE00000002	CDS	10141488	10141641	+
GWHAAZE00000002	CDS	10141725	10141773	+
GWHAAZE00000002	CDS	10141896	10142010	+
GWHAAZE00000002	CDS	10142217	10142308	+
GWHAAZE00000002	CDS	10143396	10143552	+
GWHAAZE00000002	CDS	10143856	10143920	+
GWHAAZE00000002	CDS	10143981	10144054	+
GWHAAZE00000002	CDS	10145321	10145426	+
GWHAAZE00000002	CDS	10145731	10145889	+

Transcript Sequence
>GWHTAAZE005579 CACCCTATACTTGCCATTCAGGTCCTTCCGGCTATATATTGTGGACAGGAGTTTGCGAATGGGCCGGTCCCTAATTATGCTTATTCTTCTATATATTACAATGGAGTTCCCCGCACTGGATCTCCTCCTTGGAGACAGGATGATAAAGATGGCCATTATATTTTTGTCGTAGGAGAGAATTTAACTTCTCGATATAGAATTCTGAGTAAAATGGGTGAAGGGACTTTTGGGCAAGTTTTGGAATGTTTAGACAATGAAAAGAAAGAGATTGTGGCAATAAAAATTGTTCGTTCAGTACACAAATATCGCGAGGCTGCCATGATTGAAATTGATGTTCTCCAGAAACTTGCCAGGCATGATGTTGGCAGTACACGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTTTTTGAGAAGCTTGGTCCAAGCTTATACGATTTTCTCCGCAAAAACAGCTATCGTTCATTTCCCATTGATCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAATCTGTAGCATTTATGCATGATTTGCACCTAATTCATACCGATCTGAAACCAGAAAATATTCTTCTTGTTTCCCCCGAGTATATCAAAGTGCCAGATTACAAGTTTCTATCGCGCTCCACAAAAGAAGGTTCCTATTTCAAGAATTTGCCAAAAACAAGTGCCATTAAGCTTATTGATTTTGGGAGCACTACATTTGAACATCAGGATCACAGCTATGTGGTGTCAACTCGCCATTACCGTGCACCAGAAGTTATTCTGGGTCTTGGATGGAATTATCCTTGTGATATGTGGAGCATAGGTTGCATACTAGTCGAACTCTGCTCTATTAGTGGTCTTAGGGTCCTACTACGACCTTGCTGGAACATGATTTGTTCTATTTCCTATGGGATCTTACTTTTTCGCCGTGCTGATAAATATTTTAGAAGGGGCACACGTTTGGATTGGCCAGAGGGTGCAACGTCCAGAGAGAGTATGAGGGCAGTTTGGAAATTACCCCGTCTGCAGAACCTGATAATGCAGCATGTAGACCACTCCGCTGGGGATTTGATCGATCTATTGCAGGGGCTTTTACGATATGACCCAGGAGATCGGCTCAAAGCAAGGGAGGCTCTAAGACATCCCTTCTTCGCAAGGGACATGAGAAGGTGTGGCTTTCCTTTGTAA

Network for GWHGAAZE005571

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	65	385	7.80E-45

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_CLK

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	75.901
	SRR3591706	second leaf	63.468
	SRR3591707	mature leaf	51.442
	SRR3591708	Shoot apex	62.397
	SRR3591709	Stem	74.513
	SRR3591710	White floral bud	92.472
	SRR3591711	White flower	60.323
	SRR3591712	Green floral bud	92.103
	SRR3591713	Yellow flower	56.992
SRP173429	SRR8316895	Juvenile bud stage	41.535
	SRR8316896	Juvenile bud stage	46.872
	SRR8316897	Juvenile bud stage	24.869
	SRR8316894	Third green stage	29.593
	SRR8316900	Third green stage	93.409
	SRR8316901	Third green stage	81.556
	SRR8316898	Complete white stage	39.764
	SRR8316899	Complete white stage	126.187
	SRR8316903	Complete white stage	55.267
	SRR8316902	Silver flowering stage	31.818
	SRR8316904	Silver flowering stage	45.916
	SRR8316905	Silver flowering stage	19.886
	SRR8316906	Gold flowering stage	63.151
	SRR8316907	Gold flowering stage	59.680
	SRR8316908	Gold flowering stage	62.292
SRP132670	SRR6706286	Control	69.151
	SRR6706287	Light intensity 50%	72.536
	SRR6706288	Light intensity 20%	78.002
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	55.012
	CNS0095593	Slightly white alabastrum(diploid) 2	57.886
	CNS0095594	Slightly white alabastrum(diploid) 3	49.279
	CNS0095595	Whole white alabastrum(diploid) 2	70.794
	CNS0095596	Whole white alabastrum(diploid) 3	70.021
	CNS0095597	Whole white alabastrum(diploid) 4	76.660
	CNS0095598	Silvery flower (diploied) 1	57.309
	CNS0095599	Silvery flower (diploied) 2	42.257
	CNS0095600	Silvery flower (diploied) 3	59.126
	CNS0095601	Golden flower (diploid) 1	38.162
	CNS0095602	Golden flower (diploid) 2	45.471
	CNS0095603	Golden flower (diploid) 3	42.734
	CNS0095604	Slightly white alabastrum(tetraploid) 1	67.857
	CNS0095605	Slightly white alabastrum(tetraploid) 2	56.705
	CNS0095606	Slightly white alabastrum(tetraploid) 3	97.755
	CNS0095607	Whole white alabastrum(tetraploid) 1	66.262
	CNS0095608	Whole white alabastrum(tetraploid) 2	71.288
	CNS0095609	Whole white alabastrum(tetraploid) 3	82.249
	CNS0095610	Silvery flower (diploied) 1	53.711
	CNS0095611	Silvery flower (diploied) 2	50.590
	CNS0095612	Silvery flower (diploied) 3	87.115
	CNS0095613	Golden flower (tetraploid) 1	47.331
	CNS0095614	Golden flower (tetraploid) 2	53.854
	CNS0095615	Golden flower (tetraploid) 3	39.986
CRA001975	CRR073297	Stem 1	34.286
	CRR073298	Stem 2	30.409
	CRR073299	Stem 3	18.330
	CRR073300	Leaf 1	40.738
	CRR073301	Leaf 2	44.430
	CRR073302	Leaf 3	20.697
	CRR073303	Juvenile bud 1	30.839
	CRR073304	Juvenile bud 2	20.828
	CRR073305	Juvenile bud 3	33.712
	CRR073306	Third green 1	19.598
	CRR073307	Third green 2	15.943
	CRR073308	Third green 3	19.766
	CRR073309	Second white 1	14.950
	CRR073310	Second white 2	18.019
	CRR073311	Second white 3	14.385
	CRR073312	Silver flowering 1	14.798
	CRR073313	Silver flowering 2	12.015
	CRR073314	Silver flowering 3	10.492
	CRR073315	Gold flowering 1	10.697
	CRR073316	Gold flowering 2	18.312
	CRR073317	Gold flowering 3	7.809
	CRR073318	Tawny withering 1	17.812
	CRR073319	Tawny withering 2	18.310
	CRR073320	Tawny withering 3	16.110