Detail information of GWHGAAZE005638


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004143253.11.95435E-86PREDICTED: CASP-like protein 2-like [Cucumis sativus]
Swissprottr|P0DI70|CSPL2_GINBI3E-74CASP-like protein 5A1
trEMBLtr|A0A0A0KF35|A0A0A0KF35_CUCSA7E-87Uncharacterized protein {ECO:0000313|EMBL:KGN48158.1}
TAIR10AT2G28370.12E-59Uncharacterised protein family (UPF0497)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1120994911213512-
GWHAAZE00000002mRNA1120994911213512-
GWHAAZE00000002exon1121329811213512-
GWHAAZE00000002exon1121044211210574-
GWHAAZE00000002exon1120994911210176-
GWHAAZE00000002CDS1121329811213512-
GWHAAZE00000002CDS1121044211210574-
GWHAAZE00000002CDS1120994911210176-
Transcript Sequence

Network for GWHGAAZE005638

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0025GO:0015914 phospholipid transport GOslim:biological_process
GO:0140326 ATPase-coupled intramembrane lipid transporter activity GOslim:molecular_function


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04535.13DUF588361762.50E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.704
SRR3591706second leaf13.533
SRR3591707mature leaf17.551
SRR3591708Shoot apex14.815
SRR3591709Stem26.102
SRR3591710White floral bud18.983
SRR3591711White flower25.997
SRR3591712Green floral bud19.208
SRR3591713Yellow flower6.392
SRP173429 SRR8316895Juvenile bud stage 11.575
SRR8316896Juvenile bud stage 14.577
SRR8316897Juvenile bud stage 7.005
SRR8316894Third green stage 6.335
SRR8316900Third green stage 18.335
SRR8316901Third green stage 13.063
SRR8316898Complete white stage 1.973
SRR8316899Complete white stage 18.962
SRR8316903Complete white stage 6.334
SRR8316902Silver flowering stage1.243
SRR8316904Silver flowering stage3.866
SRR8316905Silver flowering stage1.142
SRR8316906Gold flowering stage 1.666
SRR8316907Gold flowering stage 5.259
SRR8316908Gold flowering stage 4.982
SRP132670SRR6706286Control20.972
SRR6706287Light intensity 50%15.767
SRR6706288Light intensity 20%17.065
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.788
CNS0095593Slightly white alabastrum(diploid) 217.886
CNS0095594Slightly white alabastrum(diploid) 317.918
CNS0095595Whole white alabastrum(diploid) 210.761
CNS0095596Whole white alabastrum(diploid) 312.945
CNS0095597Whole white alabastrum(diploid) 49.103
CNS0095598Silvery flower (diploied) 122.771
CNS0095599Silvery flower (diploied) 217.801
CNS0095600Silvery flower (diploied) 319.055
CNS0095601Golden flower (diploid) 115.059
CNS0095602Golden flower (diploid) 219.337
CNS0095603Golden flower (diploid) 320.601
CNS0095604Slightly white alabastrum(tetraploid) 113.156
CNS0095605Slightly white alabastrum(tetraploid) 211.614
CNS0095606Slightly white alabastrum(tetraploid) 318.182
CNS0095607Whole white alabastrum(tetraploid) 18.319
CNS0095608Whole white alabastrum(tetraploid) 28.961
CNS0095609Whole white alabastrum(tetraploid) 313.184
CNS0095610Silvery flower (diploied) 114.240
CNS0095611Silvery flower (diploied) 213.169
CNS0095612Silvery flower (diploied) 38.368
CNS0095613Golden flower (tetraploid) 15.289
CNS0095614Golden flower (tetraploid) 211.306
CNS0095615Golden flower (tetraploid) 33.134
CRA001975CRR073297Stem 123.805
CRR073298Stem 222.381
CRR073299Stem 325.339
CRR073300Leaf 120.608
CRR073301Leaf 227.117
CRR073302Leaf 317.483
CRR073303Juvenile bud 124.133
CRR073304Juvenile bud 212.528
CRR073305Juvenile bud 331.507
CRR073306Third green 12.637
CRR073307Third green 23.571
CRR073308Third green 34.794
CRR073309Second white 16.092
CRR073310Second white 21.279
CRR073311Second white 32.242
CRR073312Silver flowering 11.340
CRR073313Silver flowering 23.863
CRR073314Silver flowering 31.831
CRR073315Gold flowering 112.058
CRR073316Gold flowering 215.251
CRR073317Gold flowering 313.074
CRR073318Tawny withering 132.830
CRR073319Tawny withering 226.708
CRR073320Tawny withering 329.922