Detail information of GWHGAAZE005721


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011012418.17.7709E-139PREDICTED: uncharacterized protein LOC105116670 [Populus euphratica]
trEMBLtr|A0A068VQ04|A0A068VQ04_COFCA7E-139Coffea canephora DH200=94 genomic scaffold, scaffold_6850 {ECO:0000313|EMBL:CDP21813.1}
TAIR10AT3G10040.11E-81sequence-specific DNA binding transcription factors

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene1266303612664121+
GWHAAZE00000002mRNA1266303612664121+
GWHAAZE00000002exon1266303612663634+
GWHAAZE00000002exon1266374312664121+
GWHAAZE00000002CDS1266303612663634+
GWHAAZE00000002CDS1266374312664121+
Transcript Sequence

Network for GWHGAAZE005721

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.7Myb_DNA-bind_411301.40E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.412
SRR3591706second leaf2.000
SRR3591707mature leaf0.168
SRR3591708Shoot apex6.309
SRR3591709Stem42.131
SRR3591710White floral bud4.200
SRR3591711White flower5.894
SRR3591712Green floral bud8.268
SRR3591713Yellow flower1.672
SRP173429 SRR8316895Juvenile bud stage 15.233
SRR8316896Juvenile bud stage 25.737
SRR8316897Juvenile bud stage 22.329
SRR8316894Third green stage 6.048
SRR8316900Third green stage 11.770
SRR8316901Third green stage 11.311
SRR8316898Complete white stage 5.729
SRR8316899Complete white stage 7.468
SRR8316903Complete white stage 7.406
SRR8316902Silver flowering stage11.222
SRR8316904Silver flowering stage23.833
SRR8316905Silver flowering stage12.222
SRR8316906Gold flowering stage 14.290
SRR8316907Gold flowering stage 26.037
SRR8316908Gold flowering stage 32.828
SRP132670SRR6706286Control5.744
SRR6706287Light intensity 50%7.494
SRR6706288Light intensity 20%11.205
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.628
CNS0095593Slightly white alabastrum(diploid) 27.214
CNS0095594Slightly white alabastrum(diploid) 36.502
CNS0095595Whole white alabastrum(diploid) 27.964
CNS0095596Whole white alabastrum(diploid) 38.869
CNS0095597Whole white alabastrum(diploid) 47.345
CNS0095598Silvery flower (diploied) 16.566
CNS0095599Silvery flower (diploied) 23.868
CNS0095600Silvery flower (diploied) 31.422
CNS0095601Golden flower (diploid) 15.793
CNS0095602Golden flower (diploid) 24.129
CNS0095603Golden flower (diploid) 34.166
CNS0095604Slightly white alabastrum(tetraploid) 110.520
CNS0095605Slightly white alabastrum(tetraploid) 212.227
CNS0095606Slightly white alabastrum(tetraploid) 37.787
CNS0095607Whole white alabastrum(tetraploid) 15.512
CNS0095608Whole white alabastrum(tetraploid) 26.464
CNS0095609Whole white alabastrum(tetraploid) 310.778
CNS0095610Silvery flower (diploied) 13.686
CNS0095611Silvery flower (diploied) 22.146
CNS0095612Silvery flower (diploied) 38.592
CNS0095613Golden flower (tetraploid) 14.324
CNS0095614Golden flower (tetraploid) 24.248
CNS0095615Golden flower (tetraploid) 30.468
CRA001975CRR073297Stem 134.710
CRR073298Stem 239.050
CRR073299Stem 332.466
CRR073300Leaf 132.217
CRR073301Leaf 222.095
CRR073302Leaf 331.542
CRR073303Juvenile bud 136.782
CRR073304Juvenile bud 217.139
CRR073305Juvenile bud 321.291
CRR073306Third green 11.754
CRR073307Third green 23.970
CRR073308Third green 313.015
CRR073309Second white 12.279
CRR073310Second white 23.319
CRR073311Second white 30.594
CRR073312Silver flowering 11.338
CRR073313Silver flowering 23.211
CRR073314Silver flowering 32.527
CRR073315Gold flowering 10.830
CRR073316Gold flowering 21.040
CRR073317Gold flowering 30.375
CRR073318Tawny withering 1320.572
CRR073319Tawny withering 279.520
CRR073320Tawny withering 3514.977