Detail information of GWHGAAZE006475


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010646199.10PREDICTED: fumarylacetoacetase isoform X2 [Vitis vinifera]
Swissprottr|O65373|BAG5_ARATH7E-63BAG family molecular chaperone regulator 5, mitochondrial (Precursor)
trEMBLtr|A0A061GH22|A0A061GH22_THECC0Fumarylacetoacetase {ECO:0000313|EMBL:EOY28876.1}
TAIR10AT1G12050.10fumarylacetoacetase, putative

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2619181126198565-
GWHAAZE00000002mRNA2619181126198565-
GWHAAZE00000002exon2619836226198565-
GWHAAZE00000002exon2619656126196639-
GWHAAZE00000002exon2619637926196437-
GWHAAZE00000002exon2619614626196270-
GWHAAZE00000002exon2619595126196025-
GWHAAZE00000002exon2619531126195386-
GWHAAZE00000002exon2619496026195059-
GWHAAZE00000002exon2619481226194871-
GWHAAZE00000002exon2619458826194658-
GWHAAZE00000002exon2619442126194483-
GWHAAZE00000002exon2619388426193948-
GWHAAZE00000002exon2619360926193705-
GWHAAZE00000002exon2619337126193496-
GWHAAZE00000002exon2619315926193195-
GWHAAZE00000002exon2619181126192445-
GWHAAZE00000002CDS2619836226198565-
GWHAAZE00000002CDS2619656126196639-
GWHAAZE00000002CDS2619637926196437-
GWHAAZE00000002CDS2619614626196270-
GWHAAZE00000002CDS2619595126196025-
GWHAAZE00000002CDS2619531126195386-
GWHAAZE00000002CDS2619496026195059-
GWHAAZE00000002CDS2619481226194871-
GWHAAZE00000002CDS2619458826194658-
GWHAAZE00000002CDS2619442126194483-
GWHAAZE00000002CDS2619388426193948-
GWHAAZE00000002CDS2619360926193705-
GWHAAZE00000002CDS2619337126193496-
GWHAAZE00000002CDS2619315926193195-
GWHAAZE00000002CDS2619181126192445-
Transcript Sequence

Network for GWHGAAZE006475

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09298.12FAA_hydrolase_N181222.00E-35
PF01557.19FAA_hydrolase1284118.10E-56
PF02179.17BAG4955677.60E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01555FAH, fahA Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Tyrosine metabolismmap00350
Styrene degradationmap00643

Gene Ontology

GO term OntologyName
GO:0009072biological_processaromatic amino acid family metabolic process
GO:0004334molecular_functionfumarylacetoacetase activity
GO:0003824molecular_functioncatalytic activity
GO:0051087molecular_functionchaperone binding
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf70.408
SRR3591706second leaf35.194
SRR3591707mature leaf38.111
SRR3591708Shoot apex46.163
SRR3591709Stem127.759
SRR3591710White floral bud51.367
SRR3591711White flower66.662
SRR3591712Green floral bud46.896
SRR3591713Yellow flower69.066
SRP173429 SRR8316895Juvenile bud stage 31.694
SRR8316896Juvenile bud stage 46.261
SRR8316897Juvenile bud stage 31.587
SRR8316894Third green stage 17.120
SRR8316900Third green stage 54.045
SRR8316901Third green stage 47.970
SRR8316898Complete white stage 25.886
SRR8316899Complete white stage 65.156
SRR8316903Complete white stage 38.806
SRR8316902Silver flowering stage26.551
SRR8316904Silver flowering stage34.228
SRR8316905Silver flowering stage18.083
SRR8316906Gold flowering stage 61.713
SRR8316907Gold flowering stage 54.015
SRR8316908Gold flowering stage 80.530
SRP132670SRR6706286Control60.568
SRR6706287Light intensity 50%60.324
SRR6706288Light intensity 20%60.581
CNP0000432CNS0095592Slightly white alabastrum(diploid) 131.439
CNS0095593Slightly white alabastrum(diploid) 230.646
CNS0095594Slightly white alabastrum(diploid) 329.846
CNS0095595Whole white alabastrum(diploid) 230.121
CNS0095596Whole white alabastrum(diploid) 322.372
CNS0095597Whole white alabastrum(diploid) 428.616
CNS0095598Silvery flower (diploied) 158.387
CNS0095599Silvery flower (diploied) 256.765
CNS0095600Silvery flower (diploied) 394.341
CNS0095601Golden flower (diploid) 169.178
CNS0095602Golden flower (diploid) 289.068
CNS0095603Golden flower (diploid) 383.235
CNS0095604Slightly white alabastrum(tetraploid) 128.476
CNS0095605Slightly white alabastrum(tetraploid) 223.240
CNS0095606Slightly white alabastrum(tetraploid) 349.808
CNS0095607Whole white alabastrum(tetraploid) 117.098
CNS0095608Whole white alabastrum(tetraploid) 211.941
CNS0095609Whole white alabastrum(tetraploid) 336.918
CNS0095610Silvery flower (diploied) 179.900
CNS0095611Silvery flower (diploied) 298.018
CNS0095612Silvery flower (diploied) 366.435
CNS0095613Golden flower (tetraploid) 150.594
CNS0095614Golden flower (tetraploid) 273.035
CNS0095615Golden flower (tetraploid) 359.544
CRA001975CRR073297Stem 144.395
CRR073298Stem 243.937
CRR073299Stem 357.533
CRR073300Leaf 157.411
CRR073301Leaf 257.290
CRR073302Leaf 363.130
CRR073303Juvenile bud 165.632
CRR073304Juvenile bud 257.206
CRR073305Juvenile bud 382.702
CRR073306Third green 127.664
CRR073307Third green 224.608
CRR073308Third green 330.009
CRR073309Second white 155.661
CRR073310Second white 231.620
CRR073311Second white 322.573
CRR073312Silver flowering 121.933
CRR073313Silver flowering 230.417
CRR073314Silver flowering 328.129
CRR073315Gold flowering 153.291
CRR073316Gold flowering 263.612
CRR073317Gold flowering 351.533
CRR073318Tawny withering 179.317
CRR073319Tawny withering 269.754
CRR073320Tawny withering 358.179