Detail information of GWHGAAZE006518


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009614255.10PREDICTED: heat shock 70 kDa protein 16 [Nicotiana tomentosiformis]
Swissprottr|Q9SAB1|HSP7Q_ARATH0Heat shock 70 kDa protein 16
trEMBLtr|K4B9R8|K4B9R8_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc02g080470.2.1}
TAIR10AT1G11660.10heat shock protein 70 (Hsp 70) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene2696658126972918-
GWHAAZE00000002mRNA2696658126972918-
GWHAAZE00000002exon2696658126966677-
GWHAAZE00000002exon2696727126967401-
GWHAAZE00000002exon2696751026967638-
GWHAAZE00000002exon2696772726967873-
GWHAAZE00000002exon2696906826969265-
GWHAAZE00000002exon2696987426970023-
GWHAAZE00000002exon2697022126970316-
GWHAAZE00000002exon2697067426970886-
GWHAAZE00000002exon2697174926972918-
GWHAAZE00000002CDS2697174926972918-
GWHAAZE00000002CDS2697067426970886-
GWHAAZE00000002CDS2697022126970316-
GWHAAZE00000002CDS2696987426970023-
GWHAAZE00000002CDS2696906826969265-
GWHAAZE00000002CDS2696772726967873-
GWHAAZE00000002CDS2696751026967638-
GWHAAZE00000002CDS2696727126967401-
GWHAAZE00000002CDS2696658126966677-
Transcript Sequence

Network for GWHGAAZE006518

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP7036676.60E-149
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09489HSPA4 Tight junction map04530
Antigen processing and presentationmap04612

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.523
SRR3591706second leaf10.338
SRR3591707mature leaf11.898
SRR3591708Shoot apex14.158
SRR3591709Stem18.149
SRR3591710White floral bud29.098
SRR3591711White flower27.995
SRR3591712Green floral bud25.100
SRR3591713Yellow flower23.869
SRP173429 SRR8316895Juvenile bud stage 9.073
SRR8316896Juvenile bud stage 13.407
SRR8316897Juvenile bud stage 7.163
SRR8316894Third green stage 7.421
SRR8316900Third green stage 20.663
SRR8316901Third green stage 17.498
SRR8316898Complete white stage 11.953
SRR8316899Complete white stage 19.194
SRR8316903Complete white stage 23.131
SRR8316902Silver flowering stage10.268
SRR8316904Silver flowering stage16.712
SRR8316905Silver flowering stage7.200
SRR8316906Gold flowering stage 21.100
SRR8316907Gold flowering stage 15.253
SRR8316908Gold flowering stage 19.887
SRP132670SRR6706286Control13.089
SRR6706287Light intensity 50%15.345
SRR6706288Light intensity 20%14.150
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.935
CNS0095593Slightly white alabastrum(diploid) 28.859
CNS0095594Slightly white alabastrum(diploid) 37.166
CNS0095595Whole white alabastrum(diploid) 210.466
CNS0095596Whole white alabastrum(diploid) 311.188
CNS0095597Whole white alabastrum(diploid) 411.663
CNS0095598Silvery flower (diploied) 113.318
CNS0095599Silvery flower (diploied) 29.112
CNS0095600Silvery flower (diploied) 329.449
CNS0095601Golden flower (diploid) 110.174
CNS0095602Golden flower (diploid) 221.844
CNS0095603Golden flower (diploid) 320.432
CNS0095604Slightly white alabastrum(tetraploid) 112.455
CNS0095605Slightly white alabastrum(tetraploid) 29.623
CNS0095606Slightly white alabastrum(tetraploid) 317.639
CNS0095607Whole white alabastrum(tetraploid) 115.443
CNS0095608Whole white alabastrum(tetraploid) 214.838
CNS0095609Whole white alabastrum(tetraploid) 321.648
CNS0095610Silvery flower (diploied) 119.959
CNS0095611Silvery flower (diploied) 219.921
CNS0095612Silvery flower (diploied) 326.961
CNS0095613Golden flower (tetraploid) 19.308
CNS0095614Golden flower (tetraploid) 217.046
CNS0095615Golden flower (tetraploid) 321.001
CRA001975CRR073297Stem 115.249
CRR073298Stem 213.028
CRR073299Stem 312.170
CRR073300Leaf 118.173
CRR073301Leaf 213.939
CRR073302Leaf 311.684
CRR073303Juvenile bud 113.386
CRR073304Juvenile bud 213.831
CRR073305Juvenile bud 316.407
CRR073306Third green 112.484
CRR073307Third green 29.718
CRR073308Third green 311.263
CRR073309Second white 18.378
CRR073310Second white 212.172
CRR073311Second white 313.117
CRR073312Silver flowering 112.023
CRR073313Silver flowering 210.628
CRR073314Silver flowering 312.738
CRR073315Gold flowering 19.186
CRR073316Gold flowering 215.941
CRR073317Gold flowering 38.173
CRR073318Tawny withering 19.638
CRR073319Tawny withering 27.967
CRR073320Tawny withering 310.626