Gene detail

Detail information of GWHGAAZE008216

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AID55346.1	0	EIN3-like protein EIL4 [Actinidia chinensis]
Swissprot	tr\|O23116\|EIL3_ARATH	2E-177	ETHYLENE INSENSITIVE 3-like 3 protein
trEMBL	tr\|A0A075EB47\|A0A075EB47_ACTCH	0	EIN3-like protein EIL4 {ECO:0000313\|EMBL:AID55346.1}
TAIR10	AT1G73730.1	4E-129	ETHYLENE-INSENSITIVE3-like 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	65436727	65438604	-
GWHAAZE00000002	mRNA	65436727	65438604	-
GWHAAZE00000002	exon	65436727	65438604	-
GWHAAZE00000002	CDS	65436727	65438604	-

Transcript Sequence
>GWHTAAZE008224 ATGGAGCAATTTGTGATCGATGGCGATTCATTGGGTGATAGTTCGGATATCGAGGTCGATGACCTAAAGTGCGAGAATTTAGCCGATGAGAAAGAGGTTAGTGATGAAGAGATTGAAGCTGAAGATTTGGAGAGGCGAATGTGGAAGGACCGAATCAAGCTCAAGAGAATCAAAGAGAAACAAAAGCTTGAAGCCCAACAAGCTGAGGAGAAGAAAAAGACCAAACAATCCACTGATCAAGCTAGACGCAAGAAAATGTCGAGAGCTCAAGATGGGATTCTCAAGTATATGTTAAAGCTTATGGAAGTTTGCAAAGCCCGTGGTTTTGTATACGGGATTATACCCGAGAAAGGTAAGCCCGTTAGCGGTGCATCGGATAACATAAGAGCTTGGTGGAAAGAAAAGGTTAAGTTCGATAAAAACGGACCGTTAGCCATAGCCAAATATGAAGCGGAGTGCTTAAGGATGAGTGAAGCTGTTGGTTGTCAAAATGGAAACTCGCAAAGCGTTTTACAAGACTTGCAAGATGCGACTTTAGGGTCACTTTTGTCTTCTTTGATGCAACACTGCGATCCACCGCAGAGGAAGTATCCGTTGGAGAAAGGTTTACCGCCACCGTGGTGGCCAACAGGCAGTGAAGAATGGTGGGTGAAATTAAAGTTACCCAAGGGTCAAAGTCCACCGTACAAGAAGCCGCATGATTTGAAAAAGATATGGAAAGTTGGAGTACTTACAGCTGTGATAAAGCATATGTCACCTGATATTGCAAAGATCCGACGTCTGGTGAGGCAATCAAAGTGCTTACAGGATAAAATGACTGCTAAAGAGAGCTCGATTTGGTTAGGGGTTTTGAGCAGAGAGGAATCCCTCATTCAGCAGCCTAGTAGTGATAGGGCGTCTGAATTAACCGAGACGCCTTCAGGTGGACGAGTGGAAAAGTGTAACTTACCAAACTGCAGTGACAGTGACTACGACGTTGATGGTGTTGATGATGGAGTGGGCTCCGTTTCATCAAAAGATGATCGAAGAAATCAAGAAATGGATGTGGACCCGTGTGATAATTCTCGCAATGTTGACCCTATACCGGTTAATAATACAGAGGAAACGGAGAAGCGGCCTAAGAAAAGAAAACGGGTGAGATCTAAACCGGCTGATCAACAAGCCGAGCCAACACCGAATGAGATTCAAGATGATGATCTGAGAACCAATTTACCCGATATAAATCAAACTGATGCACAATTGGGTGGATACCAGATGCATGAAAACCAACTTGAGATTGATACAAGAAGTACATCTATGATGAATCTGGAGAAAGATACTGAGGCTCAGTCGAATTTACCAGTACCAGAATATAACAATTTCTCCACCCTTGCTTCAACCGATGTAGTCTCACAGAACATGTTTGTGGGTGATCTGAATTTTGGGCACAGACCTCAAGATTCTGTTTTGCCTAATGGACCACAAGAACCCGGATTGCAATATCGACCACAAAATTATGGGTTAAATTATAGACCTCAGAATAGCGAATTACATCATGGACCGACTTATGGTCTCTATAATCGATCTATCCCATTTGGTCCCAATCACAATGAACTACAAGTTGGGCCGGTAGATCTTGTTGCCCCAGTGCCAGTGAGACTTAAGAATGAACAGCGTATTAATGGAGGAGTGGTTCACAATTATGTAAAAGATACATTTCCGAACGAGCAAGATAGAGCTATTGAGAATCATTTCGGGTCTCCAATCAATAGCCTTTCACTAGATTTTGGAGGATTTAATAGCCCGTTTAATCTTGGAATTGAAGGCACAAGTTCATTAGATACAAGTGAGATTGACTTTTTGCTTGATGAGGACCTTATACAATATTTCGGGGCATAA

Network for GWHGAAZE008216

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04873.14	EIN3	41	288	3.10E-124

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	EIL

KEGG pathway

KO	Enzyme	pathway	mapID
K14514	EIN3	MAPK signaling pathway - plant	map04016
K14514	EIN3	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name
GO:0005634	cellular_component	nucleus
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	13.565
	SRR3591706	second leaf	14.804
	SRR3591707	mature leaf	18.480
	SRR3591708	Shoot apex	15.880
	SRR3591709	Stem	18.529
	SRR3591710	White floral bud	25.223
	SRR3591711	White flower	40.208
	SRR3591712	Green floral bud	15.317
	SRR3591713	Yellow flower	26.708
SRP173429	SRR8316895	Juvenile bud stage	7.393
	SRR8316896	Juvenile bud stage	10.319
	SRR8316897	Juvenile bud stage	3.544
	SRR8316894	Third green stage	6.070
	SRR8316900	Third green stage	14.816
	SRR8316901	Third green stage	15.121
	SRR8316898	Complete white stage	10.473
	SRR8316899	Complete white stage	23.254
	SRR8316903	Complete white stage	16.120
	SRR8316902	Silver flowering stage	14.232
	SRR8316904	Silver flowering stage	20.923
	SRR8316905	Silver flowering stage	10.739
	SRR8316906	Gold flowering stage	26.600
	SRR8316907	Gold flowering stage	22.689
	SRR8316908	Gold flowering stage	27.311
SRP132670	SRR6706286	Control	13.422
	SRR6706287	Light intensity 50%	14.020
	SRR6706288	Light intensity 20%	13.011
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	10.239
	CNS0095593	Slightly white alabastrum(diploid) 2	7.389
	CNS0095594	Slightly white alabastrum(diploid) 3	7.099
	CNS0095595	Whole white alabastrum(diploid) 2	8.382
	CNS0095596	Whole white alabastrum(diploid) 3	7.160
	CNS0095597	Whole white alabastrum(diploid) 4	9.628
	CNS0095598	Silvery flower (diploied) 1	15.749
	CNS0095599	Silvery flower (diploied) 2	12.573
	CNS0095600	Silvery flower (diploied) 3	29.853
	CNS0095601	Golden flower (diploid) 1	12.604
	CNS0095602	Golden flower (diploid) 2	26.845
	CNS0095603	Golden flower (diploid) 3	25.320
	CNS0095604	Slightly white alabastrum(tetraploid) 1	11.066
	CNS0095605	Slightly white alabastrum(tetraploid) 2	8.782
	CNS0095606	Slightly white alabastrum(tetraploid) 3	16.733
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.199
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.906
	CNS0095609	Whole white alabastrum(tetraploid) 3	14.568
	CNS0095610	Silvery flower (diploied) 1	29.477
	CNS0095611	Silvery flower (diploied) 2	26.375
	CNS0095612	Silvery flower (diploied) 3	32.808
	CNS0095613	Golden flower (tetraploid) 1	15.520
	CNS0095614	Golden flower (tetraploid) 2	23.316
	CNS0095615	Golden flower (tetraploid) 3	28.035
CRA001975	CRR073297	Stem 1	17.714
	CRR073298	Stem 2	18.578
	CRR073299	Stem 3	15.015
	CRR073300	Leaf 1	15.694
	CRR073301	Leaf 2	14.339
	CRR073302	Leaf 3	13.914
	CRR073303	Juvenile bud 1	14.583
	CRR073304	Juvenile bud 2	16.788
	CRR073305	Juvenile bud 3	11.798
	CRR073306	Third green 1	20.386
	CRR073307	Third green 2	14.222
	CRR073308	Third green 3	21.147
	CRR073309	Second white 1	14.133
	CRR073310	Second white 2	25.865
	CRR073311	Second white 3	19.738
	CRR073312	Silver flowering 1	11.686
	CRR073313	Silver flowering 2	10.326
	CRR073314	Silver flowering 3	13.435
	CRR073315	Gold flowering 1	10.332
	CRR073316	Gold flowering 2	18.556
	CRR073317	Gold flowering 3	5.751
	CRR073318	Tawny withering 1	11.907
	CRR073319	Tawny withering 2	9.099
	CRR073320	Tawny withering 3	10.371