Detail information of GWHGAAZE008426


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011089721.10PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC [Sesamum indicum]
Swissprottr|Q9C5M0|DTC_ARATH0Mitochondrial dicarboxylate/tricarboxylate transporter DTC
trEMBLtr|A9PGY1|A9PGY1_POPTR0Uncharacterized protein {ECO:0000313|EMBL:EEE79834.1}
TAIR10AT5G19760.11E-149Mitochondrial substrate carrier family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene7479373474801833-
GWHAAZE00000002mRNA7479373474801833-
GWHAAZE00000002exon7480177674801833-
GWHAAZE00000002exon7480091974801049-
GWHAAZE00000002exon7479962374799706-
GWHAAZE00000002exon7479885774798918-
GWHAAZE00000002exon7479572974796090-
GWHAAZE00000002exon7479469774794911-
GWHAAZE00000002exon7479373474793790-
GWHAAZE00000002CDS7480177674801833-
GWHAAZE00000002CDS7480091974801049-
GWHAAZE00000002CDS7479962374799706-
GWHAAZE00000002CDS7479885774798918-
GWHAAZE00000002CDS7479572974796090-
GWHAAZE00000002CDS7479469774794911-
GWHAAZE00000002CDS7479373474793790-
Transcript Sequence

Network for GWHGAAZE008426

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0257GO:0004550 nucleoside diphosphate kinase activity GOslim:molecular_function
GO:0006183 GTP biosynthetic process GOslim:biological_process
GO:0006228 UTP biosynthetic process GOslim:biological_process
GO:0006165 nucleoside diphosphate phosphorylation GOslim:biological_process
GO:0006241 CTP biosynthetic process GOslim:biological_process


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00153.28Mito_carr381131.50E-14
PF00153.28Mito_carr1262213.90E-18
PF00153.28Mito_carr2343161.70E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf129.867
SRR3591706second leaf150.448
SRR3591707mature leaf97.124
SRR3591708Shoot apex122.459
SRR3591709Stem49.489
SRR3591710White floral bud115.777
SRR3591711White flower111.294
SRR3591712Green floral bud195.892
SRR3591713Yellow flower69.094
SRP173429 SRR8316895Juvenile bud stage 114.692
SRR8316896Juvenile bud stage 139.492
SRR8316897Juvenile bud stage 65.300
SRR8316894Third green stage 61.925
SRR8316900Third green stage 307.421
SRR8316901Third green stage 247.359
SRR8316898Complete white stage 85.597
SRR8316899Complete white stage 194.144
SRR8316903Complete white stage 81.408
SRR8316902Silver flowering stage63.594
SRR8316904Silver flowering stage67.546
SRR8316905Silver flowering stage30.684
SRR8316906Gold flowering stage 119.580
SRR8316907Gold flowering stage 122.371
SRR8316908Gold flowering stage 136.595
SRP132670SRR6706286Control212.746
SRR6706287Light intensity 50%227.307
SRR6706288Light intensity 20%266.783
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1134.135
CNS0095593Slightly white alabastrum(diploid) 2165.048
CNS0095594Slightly white alabastrum(diploid) 3134.964
CNS0095595Whole white alabastrum(diploid) 2190.460
CNS0095596Whole white alabastrum(diploid) 3223.274
CNS0095597Whole white alabastrum(diploid) 4181.295
CNS0095598Silvery flower (diploied) 157.666
CNS0095599Silvery flower (diploied) 268.691
CNS0095600Silvery flower (diploied) 381.819
CNS0095601Golden flower (diploid) 143.808
CNS0095602Golden flower (diploid) 261.630
CNS0095603Golden flower (diploid) 355.992
CNS0095604Slightly white alabastrum(tetraploid) 1209.108
CNS0095605Slightly white alabastrum(tetraploid) 2201.001
CNS0095606Slightly white alabastrum(tetraploid) 3250.459
CNS0095607Whole white alabastrum(tetraploid) 1161.585
CNS0095608Whole white alabastrum(tetraploid) 2154.789
CNS0095609Whole white alabastrum(tetraploid) 3256.928
CNS0095610Silvery flower (diploied) 195.357
CNS0095611Silvery flower (diploied) 285.249
CNS0095612Silvery flower (diploied) 392.629
CNS0095613Golden flower (tetraploid) 148.760
CNS0095614Golden flower (tetraploid) 271.970
CNS0095615Golden flower (tetraploid) 334.178
CRA001975CRR073297Stem 1178.490
CRR073298Stem 2181.094
CRR073299Stem 3200.977
CRR073300Leaf 1226.415
CRR073301Leaf 2227.223
CRR073302Leaf 3322.650
CRR073303Juvenile bud 1259.466
CRR073304Juvenile bud 2287.028
CRR073305Juvenile bud 3181.382
CRR073306Third green 1137.866
CRR073307Third green 2101.699
CRR073308Third green 3102.514
CRR073309Second white 1110.343
CRR073310Second white 284.642
CRR073311Second white 359.366
CRR073312Silver flowering 163.313
CRR073313Silver flowering 290.359
CRR073314Silver flowering 360.434
CRR073315Gold flowering 1168.116
CRR073316Gold flowering 2176.577
CRR073317Gold flowering 3163.844
CRR073318Tawny withering 1113.120
CRR073319Tawny withering 286.160
CRR073320Tawny withering 3107.449