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Detail information of GWHGAAZE008426
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_011089721.1
0
PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC [Sesamum indicum]
Swissprot
tr|Q9C5M0|DTC_ARATH
0
Mitochondrial dicarboxylate/tricarboxylate transporter DTC
trEMBL
tr|A9PGY1|A9PGY1_POPTR
0
Uncharacterized protein {ECO:0000313|EMBL:EEE79834.1}
TAIR10
AT5G19760.1
1E-149
Mitochondrial substrate carrier family protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000002
gene
74793734
74801833
-
GWHAAZE00000002
mRNA
74793734
74801833
-
GWHAAZE00000002
exon
74801776
74801833
-
GWHAAZE00000002
exon
74800919
74801049
-
GWHAAZE00000002
exon
74799623
74799706
-
GWHAAZE00000002
exon
74798857
74798918
-
GWHAAZE00000002
exon
74795729
74796090
-
GWHAAZE00000002
exon
74794697
74794911
-
GWHAAZE00000002
exon
74793734
74793790
-
GWHAAZE00000002
CDS
74801776
74801833
-
GWHAAZE00000002
CDS
74800919
74801049
-
GWHAAZE00000002
CDS
74799623
74799706
-
GWHAAZE00000002
CDS
74798857
74798918
-
GWHAAZE00000002
CDS
74795729
74796090
-
GWHAAZE00000002
CDS
74794697
74794911
-
GWHAAZE00000002
CDS
74793734
74793790
-
Transcript Sequence
>GWHTAAZE008434 ATGATCCGAGGAAGAAGAAAGAAAGAGGAGAAACGGAGGAGTGGAACTGGAGAGGATGATTCAGATTCAGAAATGGGAGAGGAGAAGCCAAAGTTTGTTGGTGTATGGCCGACCGTTAAGCCCTTTGTTAATGGCGGTGCCTCTGGTATGCTTGCCACTTGTGTCATTCAACCCATTGATATGATCAAGGTGAGAATTCAATTGGGTCAAGGATCGGCCGGTCAGGTCGCAAAGAACATGATCAAGAATGAGGGATTTGGGGCCTTGTACAATGGTTTATCTGCTGGGCTACTTAGACAAGCTACATATACAACTGCACGTCTTGGGTCATTCAGGATTTTGACAAACAAGGCAATTGAGGCAAATGACGGGAAGCCCCTCCCTCTATATCAGAAAGCTTTGTGTGGGCTAACTGCCGGAGCAATTGGAGCTTGTGTTGGTAGTCCGGCAGATCTTGCACTGATCCGAATGCAAGCTGATGCCACTTTACCCGTTGCCCAGCGCCGTAATTACACAAATGCGTTCCAAGCCCTTTATCGAATTACTGCTGATGAAGGAGTTTTGGCCCTTTGGAAGGGTGCGGGCCCTACTGTTGTGAGGGCAATGGCCCTCAACATGGGGATGCTTGCCTCTTATGATCAAAGTGTCGAGTTCTTCAAGGATTCGCTTGGTTTTGGCGAAGCTACTACTATTGTAGGGGCGAGTACGGTGTCGGGTTTTTTTGCTGCAGCTTGCAGTTTGCCCTTTGATTACGTGAAGACCCAAATTCAGAAGATGCAACCTGATGCTGAAGGGAGGTACCCTTACACTGGTTCTTTAGATTGTGCCATGAAAACCCTCAAGTCTGGTGGGCCCTTCAAATTCTACACCGGATTCCCAGTTTACTGTGTTAGGATTGCTCCTCATGTCATGATGACATGGATATTCCTAAACCAAATTCAGAAACTGGAGAAGAAAGTTGGATTGTAG
Network for GWHGAAZE008426
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
CFinderModule0257
GO:0004550 nucleoside diphosphate kinase activity GOslim:molecular_function
GO:0006183 GTP biosynthetic process GOslim:biological_process
GO:0006228 UTP biosynthetic process GOslim:biological_process
GO:0006165 nucleoside diphosphate phosphorylation GOslim:biological_process
GO:0006241 CTP biosynthetic process GOslim:biological_process
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF00153.28
Mito_carr
38
113
1.50E-14
PF00153.28
Mito_carr
126
221
3.90E-18
PF00153.28
Mito_carr
234
316
1.70E-12
Protein Sequence
>GWHPAAZE008430 MIRGRRKKEEKRRSGTGEDDSDSEMGEEKPKFVGVWPTVKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAGQVAKNMIKNEGFGALYNGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGACVGSPADLALIRMQADATLPVAQRRNYTNAFQALYRITADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDSLGFGEATTIVGASTVSGFFAAACSLPFDYVKTQIQKMQPDAEGRYPYTGSLDCAMKTLKSGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKLEKKVGL
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
129.867
SRR3591706
second leaf
150.448
SRR3591707
mature leaf
97.124
SRR3591708
Shoot apex
122.459
SRR3591709
Stem
49.489
SRR3591710
White floral bud
115.777
SRR3591711
White flower
111.294
SRR3591712
Green floral bud
195.892
SRR3591713
Yellow flower
69.094
SRP173429
SRR8316895
Juvenile bud stage
114.692
SRR8316896
Juvenile bud stage
139.492
SRR8316897
Juvenile bud stage
65.300
SRR8316894
Third green stage
61.925
SRR8316900
Third green stage
307.421
SRR8316901
Third green stage
247.359
SRR8316898
Complete white stage
85.597
SRR8316899
Complete white stage
194.144
SRR8316903
Complete white stage
81.408
SRR8316902
Silver flowering stage
63.594
SRR8316904
Silver flowering stage
67.546
SRR8316905
Silver flowering stage
30.684
SRR8316906
Gold flowering stage
119.580
SRR8316907
Gold flowering stage
122.371
SRR8316908
Gold flowering stage
136.595
SRP132670
SRR6706286
Control
212.746
SRR6706287
Light intensity 50%
227.307
SRR6706288
Light intensity 20%
266.783
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
134.135
CNS0095593
Slightly white alabastrum(diploid) 2
165.048
CNS0095594
Slightly white alabastrum(diploid) 3
134.964
CNS0095595
Whole white alabastrum(diploid) 2
190.460
CNS0095596
Whole white alabastrum(diploid) 3
223.274
CNS0095597
Whole white alabastrum(diploid) 4
181.295
CNS0095598
Silvery flower (diploied) 1
57.666
CNS0095599
Silvery flower (diploied) 2
68.691
CNS0095600
Silvery flower (diploied) 3
81.819
CNS0095601
Golden flower (diploid) 1
43.808
CNS0095602
Golden flower (diploid) 2
61.630
CNS0095603
Golden flower (diploid) 3
55.992
CNS0095604
Slightly white alabastrum(tetraploid) 1
209.108
CNS0095605
Slightly white alabastrum(tetraploid) 2
201.001
CNS0095606
Slightly white alabastrum(tetraploid) 3
250.459
CNS0095607
Whole white alabastrum(tetraploid) 1
161.585
CNS0095608
Whole white alabastrum(tetraploid) 2
154.789
CNS0095609
Whole white alabastrum(tetraploid) 3
256.928
CNS0095610
Silvery flower (diploied) 1
95.357
CNS0095611
Silvery flower (diploied) 2
85.249
CNS0095612
Silvery flower (diploied) 3
92.629
CNS0095613
Golden flower (tetraploid) 1
48.760
CNS0095614
Golden flower (tetraploid) 2
71.970
CNS0095615
Golden flower (tetraploid) 3
34.178
CRA001975
CRR073297
Stem 1
178.490
CRR073298
Stem 2
181.094
CRR073299
Stem 3
200.977
CRR073300
Leaf 1
226.415
CRR073301
Leaf 2
227.223
CRR073302
Leaf 3
322.650
CRR073303
Juvenile bud 1
259.466
CRR073304
Juvenile bud 2
287.028
CRR073305
Juvenile bud 3
181.382
CRR073306
Third green 1
137.866
CRR073307
Third green 2
101.699
CRR073308
Third green 3
102.514
CRR073309
Second white 1
110.343
CRR073310
Second white 2
84.642
CRR073311
Second white 3
59.366
CRR073312
Silver flowering 1
63.313
CRR073313
Silver flowering 2
90.359
CRR073314
Silver flowering 3
60.434
CRR073315
Gold flowering 1
168.116
CRR073316
Gold flowering 2
176.577
CRR073317
Gold flowering 3
163.844
CRR073318
Tawny withering 1
113.120
CRR073319
Tawny withering 2
86.160
CRR073320
Tawny withering 3
107.449