Detail information of GWHGAAZE008734


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011043840.10PREDICTED: molybdopterin biosynthesis protein CNX1 isoform X2 [Populus euphratica]
Swissprottr|Q39054|CNX1_ARATH2E-174Molybdopterin adenylyltransferase
trEMBLtr|U5G103|U5G103_POPTR0Uncharacterized protein {ECO:0000313|EMBL:ERP57148.1}
TAIR10AT5G20990.12E-143molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8950866589519919-
GWHAAZE00000002mRNA8950866589519919-
GWHAAZE00000002exon8951976789519919-
GWHAAZE00000002exon8951815189518264-
GWHAAZE00000002exon8951636789516468-
GWHAAZE00000002exon8951616889516251-
GWHAAZE00000002exon8951119689511423-
GWHAAZE00000002exon8951063389510740-
GWHAAZE00000002exon8951030589510408-
GWHAAZE00000002exon8950866589508872-
GWHAAZE00000002CDS8951976789519919-
GWHAAZE00000002CDS8951815189518264-
GWHAAZE00000002CDS8951636789516468-
GWHAAZE00000002CDS8951616889516251-
GWHAAZE00000002CDS8951119689511423-
GWHAAZE00000002CDS8951063389510740-
GWHAAZE00000002CDS8951030589510408-
GWHAAZE00000002CDS8950866589508872-
Transcript Sequence

Network for GWHGAAZE008734

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0047GO:0032324 molybdopterin cofactor biosynthetic process GOslim:biological_process
GO:0006777 Mo-molybdopterin cofactor biosynthetic process GOslim:biological_process
map00790 Folate biosynthesis
map04727 GABAergic synapse
GO:0008236 serine-type peptidase activity GOslim:molecular_function
map01100 Metabolic pathways


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03453.18MoeA_N2671.80E-14
PF00994.25MoCF_biosynth1312671.90E-22
PF03454.16MoeA_C2683408.70E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15376GPHN Metabolic pathways map01100
Folate biosynthesismap00790
GABAergic synapsemap04727

Gene Ontology

GO term OntologyName
GO:0032324biological_processmolybdopterin cofactor biosynthetic process
GO:0006777biological_processMo-molybdopterin cofactor biosynthetic process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.943
SRR3591706second leaf6.099
SRR3591707mature leaf4.188
SRR3591708Shoot apex5.692
SRR3591709Stem9.783
SRR3591710White floral bud6.778
SRR3591711White flower9.489
SRR3591712Green floral bud7.071
SRR3591713Yellow flower8.142
SRP173429 SRR8316895Juvenile bud stage 5.914
SRR8316896Juvenile bud stage 7.591
SRR8316897Juvenile bud stage 2.681
SRR8316894Third green stage 3.720
SRR8316900Third green stage 13.750
SRR8316901Third green stage 10.723
SRR8316898Complete white stage 5.283
SRR8316899Complete white stage 16.616
SRR8316903Complete white stage 8.468
SRR8316902Silver flowering stage3.645
SRR8316904Silver flowering stage3.057
SRR8316905Silver flowering stage1.502
SRR8316906Gold flowering stage 7.131
SRR8316907Gold flowering stage 8.885
SRR8316908Gold flowering stage 4.642
SRP132670SRR6706286Control14.118
SRR6706287Light intensity 50%11.068
SRR6706288Light intensity 20%11.104
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.202
CNS0095593Slightly white alabastrum(diploid) 25.507
CNS0095594Slightly white alabastrum(diploid) 31.943
CNS0095595Whole white alabastrum(diploid) 23.305
CNS0095596Whole white alabastrum(diploid) 32.220
CNS0095597Whole white alabastrum(diploid) 44.216
CNS0095598Silvery flower (diploied) 17.057
CNS0095599Silvery flower (diploied) 25.769
CNS0095600Silvery flower (diploied) 310.339
CNS0095601Golden flower (diploid) 15.599
CNS0095602Golden flower (diploid) 211.513
CNS0095603Golden flower (diploid) 39.117
CNS0095604Slightly white alabastrum(tetraploid) 16.310
CNS0095605Slightly white alabastrum(tetraploid) 24.057
CNS0095606Slightly white alabastrum(tetraploid) 313.161
CNS0095607Whole white alabastrum(tetraploid) 13.936
CNS0095608Whole white alabastrum(tetraploid) 22.912
CNS0095609Whole white alabastrum(tetraploid) 39.397
CNS0095610Silvery flower (diploied) 110.015
CNS0095611Silvery flower (diploied) 213.205
CNS0095612Silvery flower (diploied) 39.381
CNS0095613Golden flower (tetraploid) 13.458
CNS0095614Golden flower (tetraploid) 26.564
CNS0095615Golden flower (tetraploid) 35.362
CRA001975CRR073297Stem 112.594
CRR073298Stem 212.472
CRR073299Stem 313.867
CRR073300Leaf 16.902
CRR073301Leaf 213.131
CRR073302Leaf 310.838
CRR073303Juvenile bud 115.655
CRR073304Juvenile bud 210.193
CRR073305Juvenile bud 315.006
CRR073306Third green 14.294
CRR073307Third green 22.396
CRR073308Third green 33.700
CRR073309Second white 15.286
CRR073310Second white 26.322
CRR073311Second white 35.557
CRR073312Silver flowering 12.792
CRR073313Silver flowering 24.919
CRR073314Silver flowering 34.810
CRR073315Gold flowering 17.963
CRR073316Gold flowering 216.940
CRR073317Gold flowering 312.314
CRR073318Tawny withering 18.449
CRR073319Tawny withering 24.027
CRR073320Tawny withering 34.014