Home
Network
Network Search
Module Search
Search
Tools
Blast
Motif
GSEA
Heatmap Analysis
Jbrowse
Gene family
Cytochrome p450
TF Family
Protein Kinases
Ubiquitin
EAR family
Pathway
Download
Detail information of GWHGAAZE008921
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_004293121.1
5.00759E-90
PREDICTED: F-box protein At2g27310-like [Fragaria vesca subsp. vesca]
Swissprot
tr|Q9XIN8|FB119_ARATH
2E-62
F-box protein At2g27310
trEMBL
tr|B9SCY2|B9SCY2_RICCO
2E-89
Putative uncharacterized protein {ECO:0000313|EMBL:EEF38577.1}
TAIR10
AT2G27310.1
8E-46
F-box family protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000002
gene
96928396
96929238
+
GWHAAZE00000002
mRNA
96928396
96929238
+
GWHAAZE00000002
exon
96928396
96928885
+
GWHAAZE00000002
exon
96928919
96929238
+
GWHAAZE00000002
CDS
96928396
96928885
+
GWHAAZE00000002
CDS
96928919
96929238
+
Transcript Sequence
>GWHTAAZE008931 ATGGACATTTGCAACTCCACGTGGCCTTCCACCAACCAATCATTTGTTTCCGATATCATCTCCACCTTCTCGGCAGGTCATCGCTCCTTCTTCTCTGATTCCTTCTCCGGAATCGACCACCGGAAACCGGCTCAGCCGGTTAACCGGTCATCTACCGCCCCCCAATTAATCTCGGCAGTTGATATTCACTACGGTCAAAAAGTAATTTACTCAAAAGTGGAAGTCACGGAAACCGATACTGAGTGGTTCCGGTGCTCGCCTTTCAGAATTGACCTCCTTGAGCGGAAAGAGCCGGTAACTGCGCAAGTTAAATTCGAAAACGACGACGTCAAGTTCCAAGCAGACATCCAAAAAAACATGAGTTTAAGCTGGGTTTTAATCGACCCGACCCGGAAGAGAGCGGTTAACCTATCGAGCCGGTTGCCGGTTTCCGTTACACAGCACTGGCTGACAAGCGACGTGCAGGCGGAGTACGCCGTGGTGATGACCGAGTGCAGCGTGATGGTCACGTGCGGGGGCAAGGTGGGAGGGGACTTGCACGTGAGGGAAGTGGGGATGCAAGTGCAGGATATGGAGGGGAAGGGTTTGAGTGGGAGGGACAGTTTGGTAATTTTCGAGGGGGCATTGGAGAGTGGGAGGAGAAAGAAGGGGAATGAAGAGAGAGAAAGGTACGGGGAGTATTTGGAAATGAAGAGAGAGATTAGAGTGAGAAAGTTGAGGAGAGAGCAGATGTTGGATTCGCTGTGTATAGTAACTGGAGTTACCATTTTTATGGCTTTTGGGGTTTATTTTGTTCAGATAACAAATCTT
Network for GWHGAAZE008921
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
--
--
--
--
--
Protein Sequence
>GWHPAAZE008926 MDICNSTWPSTNQSFVSDIISTFSAGHRSFFSDSFSGIDHRKPAQPVNRSSTAPQLISAVDIHYGQKVIYSKVEVTETDTEWFRCSPFRIDLLERKEPVTAQVKFENDDVKFQADIQKNMSLSWVLIDPTRKRAVNLSSRLPVSVTQHWLTSDVQAEYAVVMTECSVMVTCGGKVGGDLHVREVGMQVQDMEGKGLSGRDSLVIFEGALESGRRKKGNEERERYGEYLEMKREIRVRKLRREQMLDSLCIVTGVTIFMAFGVYFVQITNL
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
1.470
SRR3591706
second leaf
0.972
SRR3591707
mature leaf
0.691
SRR3591708
Shoot apex
1.989
SRR3591709
Stem
17.804
SRR3591710
White floral bud
121.770
SRR3591711
White flower
111.819
SRR3591712
Green floral bud
1.400
SRR3591713
Yellow flower
123.698
SRP173429
SRR8316895
Juvenile bud stage
1.149
SRR8316896
Juvenile bud stage
0.704
SRR8316897
Juvenile bud stage
1.226
SRR8316894
Third green stage
0.591
SRR8316900
Third green stage
1.173
SRR8316901
Third green stage
0.989
SRR8316898
Complete white stage
30.617
SRR8316899
Complete white stage
3.867
SRR8316903
Complete white stage
45.504
SRR8316902
Silver flowering stage
28.667
SRR8316904
Silver flowering stage
39.700
SRR8316905
Silver flowering stage
26.727
SRR8316906
Gold flowering stage
72.432
SRR8316907
Gold flowering stage
102.753
SRR8316908
Gold flowering stage
121.653
SRP132670
SRR6706286
Control
2.914
SRR6706287
Light intensity 50%
3.469
SRR6706288
Light intensity 20%
1.602
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
1.996
CNS0095593
Slightly white alabastrum(diploid) 2
1.738
CNS0095594
Slightly white alabastrum(diploid) 3
2.571
CNS0095595
Whole white alabastrum(diploid) 2
2.046
CNS0095596
Whole white alabastrum(diploid) 3
2.066
CNS0095597
Whole white alabastrum(diploid) 4
4.684
CNS0095598
Silvery flower (diploied) 1
26.091
CNS0095599
Silvery flower (diploied) 2
15.607
CNS0095600
Silvery flower (diploied) 3
64.842
CNS0095601
Golden flower (diploid) 1
30.448
CNS0095602
Golden flower (diploid) 2
78.900
CNS0095603
Golden flower (diploid) 3
77.036
CNS0095604
Slightly white alabastrum(tetraploid) 1
1.291
CNS0095605
Slightly white alabastrum(tetraploid) 2
1.033
CNS0095606
Slightly white alabastrum(tetraploid) 3
1.229
CNS0095607
Whole white alabastrum(tetraploid) 1
2.545
CNS0095608
Whole white alabastrum(tetraploid) 2
2.187
CNS0095609
Whole white alabastrum(tetraploid) 3
0.766
CNS0095610
Silvery flower (diploied) 1
55.880
CNS0095611
Silvery flower (diploied) 2
68.065
CNS0095612
Silvery flower (diploied) 3
287.961
CNS0095613
Golden flower (tetraploid) 1
98.858
CNS0095614
Golden flower (tetraploid) 2
68.427
CNS0095615
Golden flower (tetraploid) 3
129.223
CRA001975
CRR073297
Stem 1
0.800
CRR073298
Stem 2
0.595
CRR073299
Stem 3
0.976
CRR073300
Leaf 1
0.659
CRR073301
Leaf 2
0.625
CRR073302
Leaf 3
1.067
CRR073303
Juvenile bud 1
1.243
CRR073304
Juvenile bud 2
1.678
CRR073305
Juvenile bud 3
0.569
CRR073306
Third green 1
206.960
CRR073307
Third green 2
133.145
CRR073308
Third green 3
145.760
CRR073309
Second white 1
141.553
CRR073310
Second white 2
182.591
CRR073311
Second white 3
135.320
CRR073312
Silver flowering 1
87.657
CRR073313
Silver flowering 2
86.440
CRR073314
Silver flowering 3
91.712
CRR073315
Gold flowering 1
0.889
CRR073316
Gold flowering 2
0.220
CRR073317
Gold flowering 3
0.818
CRR073318
Tawny withering 1
4.357
CRR073319
Tawny withering 2
9.583
CRR073320
Tawny withering 3
5.934