Gene detail

Detail information of GWHGAAZE009123

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_011039800.1	PREDICTED: heat shock protein 90-2 [Populus euphratica]
Swissprot	tr\|Q07078\|HSP83_ORYSJ	Heat shock protein 81-3
trEMBL	tr\|A8WEL7\|A8WEL7_9ROSI	Heat shock protein 90 {ECO:0000313\|EMBL:ABW96308.1}
TAIR10	AT5G56000.1	HEAT SHOCK PROTEIN 81.4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	103020391	103022492	-
GWHAAZE00000002	mRNA	103020391	103022492	-
GWHAAZE00000002	exon	103020391	103020741	-
GWHAAZE00000002	exon	103020831	103022492	-
GWHAAZE00000002	CDS	103020831	103022492	-
GWHAAZE00000002	CDS	103020391	103020741	-

Transcript Sequence
>GWHTAAZE009133 ATGGCCACCGAAGCTGAGACTTTCGCCTTCCAGGCAGAAATAAACCAATTGCTGAGCCTCATCATCAACACCTTCTACAGCAACGAGGAGATCTTTCTCCGTGAACTCATCAGCAATGCTTCTGATGCACTGGACAAAATTCGATTTGAGAGCCTGACTGACAAGAGCAAGCTTGATGCCCAACCTGAGCTTTTCATCCTTATTATTCCTGATAAGACTAACAACACGCTCACCATCATTGACAGTGGGATTGGAATGACCAAGGCTGATCTGGTGAATAATCTTGGAACCATTGCAAGGTCTGGAACCAAGGAGTTCATGGAAGCTCTTGCTGCTGGTGCTGATGTGAGCATGATTGGGCAGTTTGGAGTTGGGTTCTACTCGGCTTACTTGGTTGCTGAGAAAGTCAATGTTACCACTAAGCACAATGATGATGAGCAGTATGTCTGGGAGTCTCAGGCAGGTGGTTCTTTCACAATCACGAGAGACACCTCTGGAGAGAACCTAGGTAGGGGTACCAAGATGACCCTCTACCTTAAAGAAGACCAATTGGAGTACCTGGAAGAGCGCCGGCTAAAGGATCTTATCAAGAAGCATTCAGAATTCATTAGCTACCCCATTTCCCTCTGGATCGAGAAGACTACTGAGAAGGAGATATCTGATGATGAGGATGATGAAGATAAGAAAGATGAGGAGGGGAAGGAAGAGGAGGTTGATGAAGAGAAGGAAAAGGAGGACAAGAAGAAAAAGAAGATCAAGGAAGTATCACACGAGTGGTCCTTGGTGAACAAGCAGAAACCCATATGGATGAGGAAGCCGGAGGAGATCACGAAGGAAGAGTATAGTGCATTTTACAAGAGTTTAACAAATGACTGGGAGGAGCACTTGGCTGTAAAACATTTCTCAGTTGAGGGACAGCTCGAGTTCAAGGTGGTCCTTTTTGTACCTAAGAGGGCGCCCTTTGACCTTTTTGACACAAAAAAGAAACAGAACACCACCAAGCTCTATGTGCGCCGTGTATTCATCCTGGATAACTGCGAAGAGTTGATGCCTGAATATCTGAGCTTCGTGAAAGGCATTGTGGACTCCGAGGATTTGCCTCTCAACATCTCCAGAGAAATGCTTCAGCAGAATAAGATCCTCAAGGTCATTCGCAAAAATTTGGTCAAGAAATGCATTGAACTTTTCTTTGAGATTGCTGAGAACAAGGAGGATTACGATAAGTTCTATGAGGCGTTTTCAAAGAACCTGAAGCTTGCCCTTCATGAGGATTCCCAGAACCAGACTAAGATTGCTGAGTTGCTTCGCTATCATTCCACCAAGTGTGGTGATGAAATGACTAGCCTTAAGGATTATGTCACAAGGATGAAAGAGGAACAGAATGATATCTATTATATCACTGGGGAGAGCAAGAAGGCTGTAGAGAACTCACCCTTCCTTGAGAAGCTGAGGAAGAGGGGTTATGAGTTGTTGTACATGGTTAATGCCATTGATGAATCTGCAGTGGGCCAGCTGAAGGAGTTTGAGGAAAAGAAGCTTGTTTCTGCAACCAAGGAAGGCCTGAAGCTTGACGAGAGCGAAGATGAGAAGAAAAAGCAAGAAGCCTTGAAGGAGAAGTTTGAGGGGCTGTGCAAGGTTATCAAAGATGTGCTGGGTGACAAGGATCATGAAGGCACAGGCACTGGGGATTCTAGCATGGCTGGTTACATGTCAAGCAAGAAGACAATGGAGATCAATCCCGAGAATGCCATCATGGACGAGCTCAGAAAGAGGGCCGATGCAAACAAGAACGACAAGTCTGTTAAGGATTTGGTCCTGCTGCTGTTTGAGACTGCATTGCTTACGTCTGGCTTCAGCCTGGAGGAGCCAAACACATTTGGGAACAAGATTCACAGAATGTTGAAGTTGGGTTTGAGCATTGATGATGATGGTGCTGAAGCTGATGCCGATATGCCTCCTTTGGAGGAAGCAGATGCTGATGCTGAGGGTAGCAAGATGGAGGAGGTTGACTAA

Network for GWHGAAZE009123

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02518.27	HATPase_c	29	182	2.30E-14
PF00183.19	HSP90	185	554	1.80E-166
PF00183.19	HSP90	562	660	2.00E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K04079	HSP90A, htpG	Protein processing in endoplasmic reticulum	map04141
		PI3K-Akt signaling pathway	map04151
		Necroptosis	map04217
		NOD-like receptor signaling pathway	map04621
		Antigen processing and presentation	map04612
		Th17 cell differentiation	map04659
		IL-17 signaling pathway	map04657
		Estrogen signaling pathway	map04915
		Progesterone-mediated oocyte maturation	map04914
		Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006457	biological_process	protein folding
GO:0005524	molecular_function	ATP binding
GO:0051082	molecular_function	unfolded protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	13.017
	SRR3591706	second leaf	5.758
	SRR3591707	mature leaf	9.960
	SRR3591708	Shoot apex	14.269
	SRR3591709	Stem	10.936
	SRR3591710	White floral bud	11.906
	SRR3591711	White flower	12.232
	SRR3591712	Green floral bud	14.579
	SRR3591713	Yellow flower	6.962
SRP173429	SRR8316895	Juvenile bud stage	3.103
	SRR8316896	Juvenile bud stage	4.296
	SRR8316897	Juvenile bud stage	1.478
	SRR8316894	Third green stage	1.374
	SRR8316900	Third green stage	2.933
	SRR8316901	Third green stage	4.777
	SRR8316898	Complete white stage	1.446
	SRR8316899	Complete white stage	5.763
	SRR8316903	Complete white stage	1.862
	SRR8316902	Silver flowering stage	1.944
	SRR8316904	Silver flowering stage	3.221
	SRR8316905	Silver flowering stage	1.144
	SRR8316906	Gold flowering stage	1.855
	SRR8316907	Gold flowering stage	1.490
	SRR8316908	Gold flowering stage	1.981
SRP132670	SRR6706286	Control	0.894
	SRR6706287	Light intensity 50%	1.057
	SRR6706288	Light intensity 20%	1.102
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.107
	CNS0095593	Slightly white alabastrum(diploid) 2	1.907
	CNS0095594	Slightly white alabastrum(diploid) 3	2.385
	CNS0095595	Whole white alabastrum(diploid) 2	1.706
	CNS0095596	Whole white alabastrum(diploid) 3	1.721
	CNS0095597	Whole white alabastrum(diploid) 4	1.616
	CNS0095598	Silvery flower (diploied) 1	1.510
	CNS0095599	Silvery flower (diploied) 2	1.601
	CNS0095600	Silvery flower (diploied) 3	4.338
	CNS0095601	Golden flower (diploid) 1	1.458
	CNS0095602	Golden flower (diploid) 2	3.839
	CNS0095603	Golden flower (diploid) 3	3.833
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.901
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.339
	CNS0095606	Slightly white alabastrum(tetraploid) 3	7.360
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.773
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.871
	CNS0095609	Whole white alabastrum(tetraploid) 3	4.070
	CNS0095610	Silvery flower (diploied) 1	4.038
	CNS0095611	Silvery flower (diploied) 2	3.411
	CNS0095612	Silvery flower (diploied) 3	2.215
	CNS0095613	Golden flower (tetraploid) 1	2.898
	CNS0095614	Golden flower (tetraploid) 2	4.042
	CNS0095615	Golden flower (tetraploid) 3	2.471
CRA001975	CRR073297	Stem 1	4.645
	CRR073298	Stem 2	4.617
	CRR073299	Stem 3	4.957
	CRR073300	Leaf 1	4.322
	CRR073301	Leaf 2	4.072
	CRR073302	Leaf 3	4.771
	CRR073303	Juvenile bud 1	4.286
	CRR073304	Juvenile bud 2	2.811
	CRR073305	Juvenile bud 3	4.876
	CRR073306	Third green 1	3.169
	CRR073307	Third green 2	2.228
	CRR073308	Third green 3	2.185
	CRR073309	Second white 1	5.936
	CRR073310	Second white 2	4.185
	CRR073311	Second white 3	4.015
	CRR073312	Silver flowering 1	2.544
	CRR073313	Silver flowering 2	2.851
	CRR073314	Silver flowering 3	2.071
	CRR073315	Gold flowering 1	2.180
	CRR073316	Gold flowering 2	3.118
	CRR073317	Gold flowering 3	3.371
	CRR073318	Tawny withering 1	4.364
	CRR073319	Tawny withering 2	2.836
	CRR073320	Tawny withering 3	3.797