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Detail information of GWHGAAZE010730
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_010048058.1
4.55397E-29
PREDICTED: TMV resistance protein N-like isoform X1 [Eucalyptus grandis]
trEMBL
tr|A0A059C578|A0A059C578_EUCGR
2E-27
Uncharacterized protein {ECO:0000313|EMBL:KCW73497.1} (Fragment)
TAIR10
AT1G27170.1
2E-12
transmembrane receptors;ATP binding
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000003
gene
21405636
21406324
-
GWHAAZE00000003
mRNA
21405636
21406324
-
GWHAAZE00000003
exon
21405636
21405881
-
GWHAAZE00000003
exon
21405973
21406215
-
GWHAAZE00000003
exon
21406310
21406324
-
GWHAAZE00000003
CDS
21406310
21406324
-
GWHAAZE00000003
CDS
21405973
21406215
-
GWHAAZE00000003
CDS
21405636
21405881
-
Transcript Sequence
>GWHTAAZE010742 ATGATTTACATAATGGACTCGGAGATAGACTTGGATATTCAAAGCCAGTGTCTTGTAGGAGCAGACCTAAGGTTTCTTAGATTGGGGTGTGCAAACCTTGAGGGGGATTTTAAGCACCTTCTTCCAAGTTTAAGATGGCTTCAATGGAGTTGCAAGATAAATTTTACACCAACTAATTTTCTTCTAAAGAACCTCGTTATTCTTGATTTATCAGGGAGCCAAATCACAGACGAGTGGAAGGGTTGGAGCGAGATCAAGATGGCAAGAAAGTTGAAAGTTCTAAATCCATCGCGTTGCTATGGCTTAAGAAGAGTTGCACTTTTTCCTACATTTGGATGTTTAGAAAAATTGATTTTTTCTTATTGTACATCTTTGGAAAAAATTGAGCCATCAGGTGGGAATCTTATAAATTTGAGTTTTAGATCTCTCAAATTGCCAGTGCCTAAAAAACCTGGATTGTTCCATGTTTCCCGCTTTAGAGAGTTTGGATGTACAGTGGTGTGA
Network for GWHGAAZE010730
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
--
--
--
--
--
Protein Sequence
>GWHPAAZE010736 MIYIMDSEIDLDIQSQCLVGADLRFLRLGCANLEGDFKHLLPSLRWLQWSCKINFTPTNFLLKNLVILDLSGSQITDEWKGWSEIKMARKLKVLNPSRCYGLRRVALFPTFGCLEKLIFSYCTSLEKIEPSGGNLINLSFRSLKLPVPKKPGLFHVSRFREFGCTVV
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
12.965
SRR3591706
second leaf
5.653
SRR3591707
mature leaf
7.175
SRR3591708
Shoot apex
9.729
SRR3591709
Stem
14.022
SRR3591710
White floral bud
4.090
SRR3591711
White flower
4.237
SRR3591712
Green floral bud
4.782
SRR3591713
Yellow flower
3.680
SRP173429
SRR8316895
Juvenile bud stage
5.493
SRR8316896
Juvenile bud stage
10.303
SRR8316897
Juvenile bud stage
8.240
SRR8316894
Third green stage
3.350
SRR8316900
Third green stage
5.979
SRR8316901
Third green stage
9.806
SRR8316898
Complete white stage
5.102
SRR8316899
Complete white stage
11.316
SRR8316903
Complete white stage
7.135
SRR8316902
Silver flowering stage
5.868
SRR8316904
Silver flowering stage
8.190
SRR8316905
Silver flowering stage
3.233
SRR8316906
Gold flowering stage
9.067
SRR8316907
Gold flowering stage
12.722
SRR8316908
Gold flowering stage
14.517
SRP132670
SRR6706286
Control
0.989
SRR6706287
Light intensity 50%
2.733
SRR6706288
Light intensity 20%
1.992
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
13.209
CNS0095593
Slightly white alabastrum(diploid) 2
11.382
CNS0095594
Slightly white alabastrum(diploid) 3
10.079
CNS0095595
Whole white alabastrum(diploid) 2
6.854
CNS0095596
Whole white alabastrum(diploid) 3
8.615
CNS0095597
Whole white alabastrum(diploid) 4
8.600
CNS0095598
Silvery flower (diploied) 1
10.930
CNS0095599
Silvery flower (diploied) 2
10.693
CNS0095600
Silvery flower (diploied) 3
5.465
CNS0095601
Golden flower (diploid) 1
8.567
CNS0095602
Golden flower (diploid) 2
5.511
CNS0095603
Golden flower (diploid) 3
7.365
CNS0095604
Slightly white alabastrum(tetraploid) 1
6.258
CNS0095605
Slightly white alabastrum(tetraploid) 2
5.615
CNS0095606
Slightly white alabastrum(tetraploid) 3
5.542
CNS0095607
Whole white alabastrum(tetraploid) 1
4.340
CNS0095608
Whole white alabastrum(tetraploid) 2
2.887
CNS0095609
Whole white alabastrum(tetraploid) 3
4.462
CNS0095610
Silvery flower (diploied) 1
6.214
CNS0095611
Silvery flower (diploied) 2
4.146
CNS0095612
Silvery flower (diploied) 3
2.768
CNS0095613
Golden flower (tetraploid) 1
3.517
CNS0095614
Golden flower (tetraploid) 2
5.513
CNS0095615
Golden flower (tetraploid) 3
3.891
CRA001975
CRR073297
Stem 1
1.546
CRR073298
Stem 2
1.712
CRR073299
Stem 3
0.599
CRR073300
Leaf 1
2.061
CRR073301
Leaf 2
1.693
CRR073302
Leaf 3
1.000
CRR073303
Juvenile bud 1
0.467
CRR073304
Juvenile bud 2
0.035
CRR073305
Juvenile bud 3
0.519
CRR073306
Third green 1
0.000
CRR073307
Third green 2
0.000
CRR073308
Third green 3
0.077
CRR073309
Second white 1
0.452
CRR073310
Second white 2
0.859
CRR073311
Second white 3
0.000
CRR073312
Silver flowering 1
0.000
CRR073313
Silver flowering 2
0.294
CRR073314
Silver flowering 3
0.000
CRR073315
Gold flowering 1
0.000
CRR073316
Gold flowering 2
0.747
CRR073317
Gold flowering 3
0.000
CRR073318
Tawny withering 1
2.557
CRR073319
Tawny withering 2
2.897
CRR073320
Tawny withering 3
1.200