Gene detail

Detail information of GWHGAAZE011344

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011086855.1	1.1945E-146	PREDICTED: EKC/KEOPS complex subunit bud32 [Sesamum indicum]
trEMBL	tr\|B9GSK7\|B9GSK7_POPTR	2E-146	Uncharacterized protein {ECO:0000313\|EMBL:EEE80098.1}
TAIR10	AT5G26110.1	5E-109	Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	58150780	58152619	-
GWHAAZE00000003	mRNA	58150780	58152619	-
GWHAAZE00000003	exon	58150780	58150817	-
GWHAAZE00000003	exon	58150911	58150983	-
GWHAAZE00000003	exon	58151237	58151350	-
GWHAAZE00000003	exon	58151734	58152012	-
GWHAAZE00000003	exon	58152103	58152216	-
GWHAAZE00000003	exon	58152557	58152619	-
GWHAAZE00000003	CDS	58152557	58152619	-
GWHAAZE00000003	CDS	58152103	58152216	-
GWHAAZE00000003	CDS	58151734	58152012	-
GWHAAZE00000003	CDS	58151237	58151350	-
GWHAAZE00000003	CDS	58150911	58150983	-
GWHAAZE00000003	CDS	58150780	58150817	-

Transcript Sequence
>GWHTAAZE011356 ATGGAGATAACAGCGGAGGGAAAAGAAGGCTCCTTAATTCTGCTGAAGCAAGGCGCCGAAGCTAGGGTTTTTGAATCACATTTTGTGGGTAGAAGGTCTATTGTGAAGGAGCGCTTTTCAAAAAAGTACAGGCATCCAACTTTGGACGCAAAGCTCACTTTGAAACGCTTGAATGCGGAGGCCAGGTGCATGGCTAAGGCTACGCGACTTGGAGTTTCTACTCCAGCGCTTTATGCTGTAGATCCACTGCTTCATACCCTAACACTCGAGTACGTGGAGGGCCCGTCTGTTAAAGATGTATTCCTTGACTTTGGATCACAGGGTGTTGTTGAAGAAAGGATGAACGATATTGCAGTGCAAATTGGTAGTGCAATTGGAAAACTTCATGATGGCGGCCTTGTTCATGGTGATTTGACCACATCAAACATGTTAATCCGTAATGGCACTAATCAACTTGTACTCATTGATTTTGGCCTGAGCTTCACATCAGCCCTCCCAGAAGATAAAGCAGTTGATCTGTATGTACTTGAACGAGCATTGCTGTCGATGCATTCTTCCTGTGGAAATGTGATGGATCAGATACTTGCTGCGTATAGGAAATCCTCAAAGCAATGGTCATCCACATTGAATAAGCTAGCTCAAGTGAGACAAAGAGGTAGAAAGCGAACCATGATTGGATGA

Network for GWHGAAZE011344

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	55	161	1.70E-10

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	STE_STE11

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0004674	molecular_function	protein serine/threonine kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	11.838
	SRR3591706	second leaf	5.202
	SRR3591707	mature leaf	7.765
	SRR3591708	Shoot apex	9.943
	SRR3591709	Stem	9.310
	SRR3591710	White floral bud	31.610
	SRR3591711	White flower	41.778
	SRR3591712	Green floral bud	42.023
	SRR3591713	Yellow flower	37.544
SRP173429	SRR8316895	Juvenile bud stage	25.440
	SRR8316896	Juvenile bud stage	33.869
	SRR8316897	Juvenile bud stage	20.164
	SRR8316894	Third green stage	13.041
	SRR8316900	Third green stage	44.492
	SRR8316901	Third green stage	36.547
	SRR8316898	Complete white stage	8.172
	SRR8316899	Complete white stage	51.947
	SRR8316903	Complete white stage	14.884
	SRR8316902	Silver flowering stage	8.748
	SRR8316904	Silver flowering stage	10.124
	SRR8316905	Silver flowering stage	4.055
	SRR8316906	Gold flowering stage	17.099
	SRR8316907	Gold flowering stage	23.161
	SRR8316908	Gold flowering stage	24.994
SRP132670	SRR6706286	Control	23.179
	SRR6706287	Light intensity 50%	23.619
	SRR6706288	Light intensity 20%	24.411
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	31.920
	CNS0095593	Slightly white alabastrum(diploid) 2	35.511
	CNS0095594	Slightly white alabastrum(diploid) 3	27.347
	CNS0095595	Whole white alabastrum(diploid) 2	26.257
	CNS0095596	Whole white alabastrum(diploid) 3	20.968
	CNS0095597	Whole white alabastrum(diploid) 4	17.957
	CNS0095598	Silvery flower (diploied) 1	37.307
	CNS0095599	Silvery flower (diploied) 2	32.450
	CNS0095600	Silvery flower (diploied) 3	30.137
	CNS0095601	Golden flower (diploid) 1	29.210
	CNS0095602	Golden flower (diploid) 2	37.624
	CNS0095603	Golden flower (diploid) 3	34.123
	CNS0095604	Slightly white alabastrum(tetraploid) 1	12.708
	CNS0095605	Slightly white alabastrum(tetraploid) 2	12.815
	CNS0095606	Slightly white alabastrum(tetraploid) 3	11.986
	CNS0095607	Whole white alabastrum(tetraploid) 1	13.839
	CNS0095608	Whole white alabastrum(tetraploid) 2	12.924
	CNS0095609	Whole white alabastrum(tetraploid) 3	9.951
	CNS0095610	Silvery flower (diploied) 1	10.124
	CNS0095611	Silvery flower (diploied) 2	9.164
	CNS0095612	Silvery flower (diploied) 3	5.771
	CNS0095613	Golden flower (tetraploid) 1	7.565
	CNS0095614	Golden flower (tetraploid) 2	7.594
	CNS0095615	Golden flower (tetraploid) 3	6.785
CRA001975	CRR073297	Stem 1	43.349
	CRR073298	Stem 2	40.824
	CRR073299	Stem 3	55.788
	CRR073300	Leaf 1	40.413
	CRR073301	Leaf 2	39.386
	CRR073302	Leaf 3	47.702
	CRR073303	Juvenile bud 1	47.465
	CRR073304	Juvenile bud 2	39.381
	CRR073305	Juvenile bud 3	47.375
	CRR073306	Third green 1	2.896
	CRR073307	Third green 2	5.655
	CRR073308	Third green 3	7.478
	CRR073309	Second white 1	11.917
	CRR073310	Second white 2	6.710
	CRR073311	Second white 3	8.602
	CRR073312	Silver flowering 1	5.873
	CRR073313	Silver flowering 2	5.450
	CRR073314	Silver flowering 3	5.960
	CRR073315	Gold flowering 1	50.796
	CRR073316	Gold flowering 2	57.146
	CRR073317	Gold flowering 3	52.778
	CRR073318	Tawny withering 1	37.452
	CRR073319	Tawny withering 2	33.887
	CRR073320	Tawny withering 3	49.259