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Detail information of GWHGAAZE011361
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_010263414.1
1.03838E-34
PREDICTED: TMV resistance protein N-like [Nelumbo nucifera]
Swissprot
tr|Q40392|TMVRN_NICGU
2E-14
TMV resistance protein N
trEMBL
tr|K4CQG0|K4CQG0_SOLLC
7E-27
Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc09g007710.2.1}
TAIR10
AT5G36930.2
2E-19
Disease resistance protein (TIR-NBS-LRR class) family
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000003
gene
58726036
58727915
-
GWHAAZE00000003
mRNA
58726036
58727915
-
GWHAAZE00000003
exon
58726036
58726671
-
GWHAAZE00000003
exon
58726808
58727379
-
GWHAAZE00000003
exon
58727753
58727915
-
GWHAAZE00000003
CDS
58727753
58727915
-
GWHAAZE00000003
CDS
58726808
58727379
-
GWHAAZE00000003
CDS
58726036
58726671
-
Transcript Sequence
>GWHTAAZE011373 ATGAACAATGTACATGTCACTGGAAGCGTTGAACATTTGTCAAACCAATTAAGGTGGCTCTGCTGGCATCACTATCCTTTGAAATGTTTACAGTCTATTTTCCATATGGAAAAGCTCATGGTGCTAGATATGCAGTACAGTAAACTCAATACAATATGGAAAGGTTGCTCCAATCTAGACAAGTTACCTGAAAATATGGGACTTCTCAAGAACCTTACAAGTTTATACATTGATGGGTGTAATAAAAGAGAGCCAGTAAACAACTCTTGGTTTTCATCCGTTGCTTCTTGGGTGCCACTGAAAAGAAGTCCCAGTTCAACGAGATTTCTGCCAAATTCTGTTTCTTATTTGCAGTGTTTAACAGTGTTGAGTGCAAGAGACTGCAATATATTAGATGGAGATATTCCTGTAGAAATTGGGAGCTTGTCCTCATTGAAAATATTGGATTTAGGTTCAAATAATTTCTGTTTCCTACCGGACAGCCTTAGTCTACTATCGAAGCTAGAAAGGCTTGTTGTAGATAACTGTAAGAGTCTTCAATCATGCCCAAAGCTGCCTCAAAATGTTACTTTTGTAAATATGAATCATTGCACATCAGTGGAAAGATTACCTGATTTATCAAAAGATGAAAAATCTGTACTCTTCCATGTTCAGAATTGTAGTAGCCTTGTTCGTGACGACATGGTGACCTTTAACACTGTGAAGAGACAAGTCATTCATAGGCATAGTAATCTGGTAGACACTGACTACCCTGGTCTTCCCGGTCCAATCAGAAACAAAAAGATATCTTCTGCATTATTTGATTGTCCAGAAACTACAGCAAAGAAAAAGACATGTTCTATTTTTTTTGATATTCCACCAACTACAGAAAATAAAGAATATGTTGAGTTGAAGTTTCTTGATGTTTATGAGGCGAAGACAGATGGGTCTGTAACAACTCGTATTTCTAAGGTACTTGATCCTCATAAGGCAAGTTGTTATCAACGGATATTTCGTTCTTCTCATTTCAGATCACAAAACAGTGGAAACTACTTTTTGGTTCAACTCGAGAATGAAATTGTAGGTGGAGAAAAAATAGAGGTATGCTTTGAAATAGCACCATCTGCATGTATTGTTGTGAAGATGTGCCAAATTCAGCTCTTCCACAGAACACATGAGGGAGTTTTTTCAATTGACAAAATCCATGGGCATCAAAGAGGCTTCGATCTAGTGGAGACGAGCGGCGGGTTAGCCGACAAGGACTACGACTCGAAAAGCTCTAGTATTATATGGGAGGATGAAGACCCGATGATCAACAACAAAAGGGACACCGAGTATATACATATGTTCCATGATAATATTAATGGTAAATTCATCATTGGAAAACTTTAA
Network for GWHGAAZE011361
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
--
--
--
--
--
Protein Sequence
>GWHPAAZE011367 MNNVHVTGSVEHLSNQLRWLCWHHYPLKCLQSIFHMEKLMVLDMQYSKLNTIWKGCSNLDKLPENMGLLKNLTSLYIDGCNKREPVNNSWFSSVASWVPLKRSPSSTRFLPNSVSYLQCLTVLSARDCNILDGDIPVEIGSLSSLKILDLGSNNFCFLPDSLSLLSKLERLVVDNCKSLQSCPKLPQNVTFVNMNHCTSVERLPDLSKDEKSVLFHVQNCSSLVRDDMVTFNTVKRQVIHRHSNLVDTDYPGLPGPIRNKKISSALFDCPETTAKKKTCSIFFDIPPTTENKEYVELKFLDVYEAKTDGSVTTRISKVLDPHKASCYQRIFRSSHFRSQNSGNYFLVQLENEIVGGEKIEVCFEIAPSACIVVKMCQIQLFHRTHEGVFSIDKIHGHQRGFDLVETSGGLADKDYDSKSSSIIWEDEDPMINNKRDTEYIHMFHDNINGKFIIGKL
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
GO:0005515
molecular_function
protein binding
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
0.615
SRR3591706
second leaf
0.341
SRR3591707
mature leaf
0.107
SRR3591708
Shoot apex
0.844
SRR3591709
Stem
0.858
SRR3591710
White floral bud
0.148
SRR3591711
White flower
0.197
SRR3591712
Green floral bud
0.169
SRR3591713
Yellow flower
0.302
SRP173429
SRR8316895
Juvenile bud stage
0.119
SRR8316896
Juvenile bud stage
0.360
SRR8316897
Juvenile bud stage
0.077
SRR8316894
Third green stage
0.005
SRR8316900
Third green stage
0.051
SRR8316901
Third green stage
0.000
SRR8316898
Complete white stage
0.016
SRR8316899
Complete white stage
0.023
SRR8316903
Complete white stage
0.000
SRR8316902
Silver flowering stage
0.017
SRR8316904
Silver flowering stage
0.050
SRR8316905
Silver flowering stage
0.026
SRR8316906
Gold flowering stage
0.487
SRR8316907
Gold flowering stage
0.208
SRR8316908
Gold flowering stage
0.477
SRP132670
SRR6706286
Control
0.016
SRR6706287
Light intensity 50%
0.050
SRR6706288
Light intensity 20%
0.014
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
0.024
CNS0095593
Slightly white alabastrum(diploid) 2
0.131
CNS0095594
Slightly white alabastrum(diploid) 3
0.222
CNS0095595
Whole white alabastrum(diploid) 2
0.030
CNS0095596
Whole white alabastrum(diploid) 3
0.000
CNS0095597
Whole white alabastrum(diploid) 4
0.000
CNS0095598
Silvery flower (diploied) 1
0.116
CNS0095599
Silvery flower (diploied) 2
0.078
CNS0095600
Silvery flower (diploied) 3
0.071
CNS0095601
Golden flower (diploid) 1
0.000
CNS0095602
Golden flower (diploid) 2
0.050
CNS0095603
Golden flower (diploid) 3
0.148
CNS0095604
Slightly white alabastrum(tetraploid) 1
0.486
CNS0095605
Slightly white alabastrum(tetraploid) 2
0.398
CNS0095606
Slightly white alabastrum(tetraploid) 3
0.735
CNS0095607
Whole white alabastrum(tetraploid) 1
0.179
CNS0095608
Whole white alabastrum(tetraploid) 2
0.268
CNS0095609
Whole white alabastrum(tetraploid) 3
0.826
CNS0095610
Silvery flower (diploied) 1
2.054
CNS0095611
Silvery flower (diploied) 2
2.448
CNS0095612
Silvery flower (diploied) 3
2.590
CNS0095613
Golden flower (tetraploid) 1
2.245
CNS0095614
Golden flower (tetraploid) 2
2.844
CNS0095615
Golden flower (tetraploid) 3
3.106
CRA001975
CRR073297
Stem 1
0.000
CRR073298
Stem 2
0.000
CRR073299
Stem 3
0.000
CRR073300
Leaf 1
0.032
CRR073301
Leaf 2
0.032
CRR073302
Leaf 3
0.025
CRR073303
Juvenile bud 1
0.000
CRR073304
Juvenile bud 2
0.000
CRR073305
Juvenile bud 3
0.054
CRR073306
Third green 1
0.000
CRR073307
Third green 2
0.000
CRR073308
Third green 3
0.000
CRR073309
Second white 1
0.000
CRR073310
Second white 2
0.000
CRR073311
Second white 3
0.000
CRR073312
Silver flowering 1
0.000
CRR073313
Silver flowering 2
0.000
CRR073314
Silver flowering 3
0.009
CRR073315
Gold flowering 1
0.000
CRR073316
Gold flowering 2
0.000
CRR073317
Gold flowering 3
0.035
CRR073318
Tawny withering 1
0.000
CRR073319
Tawny withering 2
0.140
CRR073320
Tawny withering 3
0.046