Detail information of GWHGAAZE012120


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011090829.10PREDICTED: protein FAR1-RELATED SEQUENCE 7-like isoform X1 [Sesamum indicum]
Swissprottr|Q9M8J3|FRS7_ARATH0Protein FAR1-RELATED SEQUENCE 7
trEMBLtr|K4D3K8|K4D3K8_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc10g084220.1.1}
TAIR10AT3G06250.10FAR1-related sequence 7

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8052209680524399-
GWHAAZE00000003mRNA8052209680524399-
GWHAAZE00000003exon8052209680524399-
GWHAAZE00000003CDS8052209680524399-
Transcript Sequence

Network for GWHGAAZE012120

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03101.16FAR1521261.40E-19
PF03101.16FAR12002743.50E-19
PF10551.10MULE3764685.70E-25
PF04434.18SWIM6596871.90E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyFAR1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.458
SRR3591706second leaf11.460
SRR3591707mature leaf13.939
SRR3591708Shoot apex16.023
SRR3591709Stem14.222
SRR3591710White floral bud18.794
SRR3591711White flower23.370
SRR3591712Green floral bud19.263
SRR3591713Yellow flower17.904
SRP173429 SRR8316895Juvenile bud stage 9.393
SRR8316896Juvenile bud stage 12.216
SRR8316897Juvenile bud stage 6.682
SRR8316894Third green stage 5.581
SRR8316900Third green stage 14.209
SRR8316901Third green stage 13.389
SRR8316898Complete white stage 7.294
SRR8316899Complete white stage 19.157
SRR8316903Complete white stage 12.912
SRR8316902Silver flowering stage7.658
SRR8316904Silver flowering stage12.531
SRR8316905Silver flowering stage5.424
SRR8316906Gold flowering stage 17.367
SRR8316907Gold flowering stage 15.583
SRR8316908Gold flowering stage 18.458
SRP132670SRR6706286Control16.965
SRR6706287Light intensity 50%17.557
SRR6706288Light intensity 20%18.341
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.263
CNS0095593Slightly white alabastrum(diploid) 26.279
CNS0095594Slightly white alabastrum(diploid) 37.728
CNS0095595Whole white alabastrum(diploid) 27.066
CNS0095596Whole white alabastrum(diploid) 36.176
CNS0095597Whole white alabastrum(diploid) 45.904
CNS0095598Silvery flower (diploied) 111.397
CNS0095599Silvery flower (diploied) 29.217
CNS0095600Silvery flower (diploied) 320.349
CNS0095601Golden flower (diploid) 19.049
CNS0095602Golden flower (diploid) 221.566
CNS0095603Golden flower (diploid) 320.343
CNS0095604Slightly white alabastrum(tetraploid) 19.351
CNS0095605Slightly white alabastrum(tetraploid) 28.419
CNS0095606Slightly white alabastrum(tetraploid) 321.057
CNS0095607Whole white alabastrum(tetraploid) 16.548
CNS0095608Whole white alabastrum(tetraploid) 25.759
CNS0095609Whole white alabastrum(tetraploid) 315.734
CNS0095610Silvery flower (diploied) 119.100
CNS0095611Silvery flower (diploied) 218.896
CNS0095612Silvery flower (diploied) 318.315
CNS0095613Golden flower (tetraploid) 110.372
CNS0095614Golden flower (tetraploid) 216.273
CNS0095615Golden flower (tetraploid) 320.536
CRA001975CRR073297Stem 116.050
CRR073298Stem 216.253
CRR073299Stem 315.919
CRR073300Leaf 117.577
CRR073301Leaf 214.158
CRR073302Leaf 316.841
CRR073303Juvenile bud 114.296
CRR073304Juvenile bud 213.607
CRR073305Juvenile bud 319.984
CRR073306Third green 110.879
CRR073307Third green 27.619
CRR073308Third green 312.957
CRR073309Second white 18.535
CRR073310Second white 29.466
CRR073311Second white 39.457
CRR073312Silver flowering 19.750
CRR073313Silver flowering 28.350
CRR073314Silver flowering 38.556
CRR073315Gold flowering 19.945
CRR073316Gold flowering 216.940
CRR073317Gold flowering 314.160
CRR073318Tawny withering 19.435
CRR073319Tawny withering 29.615
CRR073320Tawny withering 310.914