Detail information of GWHGAAZE012238


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009622180.12.0812E-136PREDICTED: acylpyruvase FAHD1, mitochondrial-like [Nicotiana tomentosiformis]
trEMBLtr|A0A061ENZ6|A0A061ENZ6_THECC1E-134Fumarylacetoacetate (FAA) hydrolase family {ECO:0000313|EMBL:EOY06566.1}
TAIR10AT4G15940.15E-94Fumarylacetoacetate (FAA) hydrolase family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8229316082304903+
GWHAAZE00000003mRNA8229316082304903+
GWHAAZE00000003exon8229316082293273+
GWHAAZE00000003exon8229514982295314+
GWHAAZE00000003exon8230247082302522+
GWHAAZE00000003exon8230292282302984+
GWHAAZE00000003exon8230395182304001+
GWHAAZE00000003exon8230410482304221+
GWHAAZE00000003exon8230478882304903+
GWHAAZE00000003CDS8229316082293273+
GWHAAZE00000003CDS8229514982295314+
GWHAAZE00000003CDS8230247082302522+
GWHAAZE00000003CDS8230292282302984+
GWHAAZE00000003CDS8230395182304001+
GWHAAZE00000003CDS8230410482304221+
GWHAAZE00000003CDS8230478882304903+
Transcript Sequence

Network for GWHGAAZE012238

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01557.19FAA_hydrolase172142.20E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01557FAHD1 Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Tyrosine metabolismmap00350

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf32.843
SRR3591706second leaf7.758
SRR3591707mature leaf4.648
SRR3591708Shoot apex33.266
SRR3591709Stem49.855
SRR3591710White floral bud40.775
SRR3591711White flower180.478
SRR3591712Green floral bud28.882
SRR3591713Yellow flower277.889
SRP173429 SRR8316895Juvenile bud stage 26.731
SRR8316896Juvenile bud stage 32.139
SRR8316897Juvenile bud stage 13.580
SRR8316894Third green stage 13.262
SRR8316900Third green stage 38.502
SRR8316901Third green stage 38.144
SRR8316898Complete white stage 20.045
SRR8316899Complete white stage 54.728
SRR8316903Complete white stage 33.212
SRR8316902Silver flowering stage35.647
SRR8316904Silver flowering stage27.980
SRR8316905Silver flowering stage13.822
SRR8316906Gold flowering stage 99.258
SRR8316907Gold flowering stage 117.998
SRR8316908Gold flowering stage 109.362
SRP132670SRR6706286Control63.557
SRR6706287Light intensity 50%63.723
SRR6706288Light intensity 20%62.022
CNP0000432CNS0095592Slightly white alabastrum(diploid) 137.606
CNS0095593Slightly white alabastrum(diploid) 238.819
CNS0095594Slightly white alabastrum(diploid) 334.438
CNS0095595Whole white alabastrum(diploid) 228.792
CNS0095596Whole white alabastrum(diploid) 326.047
CNS0095597Whole white alabastrum(diploid) 427.909
CNS0095598Silvery flower (diploied) 156.463
CNS0095599Silvery flower (diploied) 243.115
CNS0095600Silvery flower (diploied) 3112.891
CNS0095601Golden flower (diploid) 190.448
CNS0095602Golden flower (diploid) 2159.857
CNS0095603Golden flower (diploid) 3159.542
CNS0095604Slightly white alabastrum(tetraploid) 138.352
CNS0095605Slightly white alabastrum(tetraploid) 234.190
CNS0095606Slightly white alabastrum(tetraploid) 350.583
CNS0095607Whole white alabastrum(tetraploid) 118.820
CNS0095608Whole white alabastrum(tetraploid) 219.923
CNS0095609Whole white alabastrum(tetraploid) 350.782
CNS0095610Silvery flower (diploied) 1162.351
CNS0095611Silvery flower (diploied) 2187.698
CNS0095612Silvery flower (diploied) 3224.867
CNS0095613Golden flower (tetraploid) 1201.249
CNS0095614Golden flower (tetraploid) 2181.009
CNS0095615Golden flower (tetraploid) 3360.959
CRA001975CRR073297Stem 149.627
CRR073298Stem 246.576
CRR073299Stem 353.658
CRR073300Leaf 157.504
CRR073301Leaf 259.315
CRR073302Leaf 353.313
CRR073303Juvenile bud 159.967
CRR073304Juvenile bud 265.994
CRR073305Juvenile bud 351.266
CRR073306Third green 143.418
CRR073307Third green 229.581
CRR073308Third green 339.023
CRR073309Second white 1144.995
CRR073310Second white 2168.117
CRR073311Second white 3162.353
CRR073312Silver flowering 1215.187
CRR073313Silver flowering 2218.898
CRR073314Silver flowering 3224.732
CRR073315Gold flowering 13.754
CRR073316Gold flowering 25.796
CRR073317Gold flowering 37.527
CRR073318Tawny withering 172.618
CRR073319Tawny withering 275.869
CRR073320Tawny withering 361.171