Detail information of GWHGAAZE012389


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrP19866.2G3PA_SPIOL0RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic; AltName: Full=NADP-dependent glyceraldehydephosphate dehydrogenase subunit A; Flags: Precursor [Spinacia oleracea]
Swissprottr|P19866|G3PA_SPIOL0Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Precursor)
trEMBLtr|A0A067L0E8|A0A067L0E8_JATCU0Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}
TAIR10AT1G12900.12E-158glyceraldehyde 3-phosphate dehydrogenase A subunit 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8473840684740015+
GWHAAZE00000003mRNA8473840684740015+
GWHAAZE00000003exon8473840684738707+
GWHAAZE00000003exon8473899284739236+
GWHAAZE00000003exon8473951384740015+
GWHAAZE00000003CDS8473840684738707+
GWHAAZE00000003CDS8473899284739236+
GWHAAZE00000003CDS8473951384740015+
Transcript Sequence

Network for GWHGAAZE012389

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00044.25Gp_dh_N161178.40E-32
PF02800.21Gp_dh_C1713277.50E-67
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05298GAPA Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Carbon fixation in photosynthetic organismsmap00710

Gene Ontology

GO term OntologyName
GO:0006006biological_processglucose metabolic process
GO:0055114biological_processoxidation-reduction process
GO:0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0050661molecular_functionNADP binding
GO:0051287molecular_functionNAD binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf820.455
SRR3591706second leaf4712.231
SRR3591707mature leaf4447.865
SRR3591708Shoot apex1583.766
SRR3591709Stem549.030
SRR3591710White floral bud56.355
SRR3591711White flower86.777
SRR3591712Green floral bud86.796
SRR3591713Yellow flower7.865
SRP173429 SRR8316895Juvenile bud stage 463.371
SRR8316896Juvenile bud stage 393.604
SRR8316897Juvenile bud stage 346.446
SRR8316894Third green stage 169.573
SRR8316900Third green stage 341.734
SRR8316901Third green stage 336.617
SRR8316898Complete white stage 39.331
SRR8316899Complete white stage 155.751
SRR8316903Complete white stage 76.109
SRR8316902Silver flowering stage12.309
SRR8316904Silver flowering stage17.346
SRR8316905Silver flowering stage5.217
SRR8316906Gold flowering stage 14.032
SRR8316907Gold flowering stage 14.601
SRR8316908Gold flowering stage 21.395
SRP132670SRR6706286Control399.966
SRR6706287Light intensity 50%278.052
SRR6706288Light intensity 20%263.940
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1248.108
CNS0095593Slightly white alabastrum(diploid) 2168.600
CNS0095594Slightly white alabastrum(diploid) 3177.848
CNS0095595Whole white alabastrum(diploid) 2136.220
CNS0095596Whole white alabastrum(diploid) 3128.271
CNS0095597Whole white alabastrum(diploid) 469.790
CNS0095598Silvery flower (diploied) 1370.010
CNS0095599Silvery flower (diploied) 2365.865
CNS0095600Silvery flower (diploied) 383.017
CNS0095601Golden flower (diploid) 1329.371
CNS0095602Golden flower (diploid) 2217.017
CNS0095603Golden flower (diploid) 3204.548
CNS0095604Slightly white alabastrum(tetraploid) 1277.235
CNS0095605Slightly white alabastrum(tetraploid) 2315.816
CNS0095606Slightly white alabastrum(tetraploid) 3465.083
CNS0095607Whole white alabastrum(tetraploid) 1105.637
CNS0095608Whole white alabastrum(tetraploid) 2103.269
CNS0095609Whole white alabastrum(tetraploid) 3240.276
CNS0095610Silvery flower (diploied) 172.265
CNS0095611Silvery flower (diploied) 2124.413
CNS0095612Silvery flower (diploied) 333.008
CNS0095613Golden flower (tetraploid) 119.918
CNS0095614Golden flower (tetraploid) 272.305
CNS0095615Golden flower (tetraploid) 319.221
CRA001975CRR073297Stem 1618.162
CRR073298Stem 2537.655
CRR073299Stem 3822.002
CRR073300Leaf 194.870
CRR073301Leaf 2147.632
CRR073302Leaf 3164.153
CRR073303Juvenile bud 1115.516
CRR073304Juvenile bud 2120.869
CRR073305Juvenile bud 3147.033
CRR073306Third green 133.042
CRR073307Third green 214.428
CRR073308Third green 325.760
CRR073309Second white 116.868
CRR073310Second white 26.657
CRR073311Second white 32.320
CRR073312Silver flowering 12.430
CRR073313Silver flowering 25.890
CRR073314Silver flowering 33.865
CRR073315Gold flowering 14062.923
CRR073316Gold flowering 23953.591
CRR073317Gold flowering 34937.947
CRR073318Tawny withering 1314.478
CRR073319Tawny withering 2262.404
CRR073320Tawny withering 3233.860