Gene detail

Detail information of GWHGAAZE013048

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KCW86052.1	0	hypothetical protein EUGRSUZ_B02757 [Eucalyptus grandis]
Swissprot	tr\|O64422\|F16P1_ORYSJ	0	Fructose-1,6-bisphosphatase, chloroplastic (Precursor)
trEMBL	tr\|A0A059D642\|A0A059D642_EUCGR	0	Uncharacterized protein {ECO:0000313\|EMBL:KCW86052.1}
TAIR10	AT3G54050.2	4E-144	high cyclic electron flow 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	95892289	95898078	-
GWHAAZE00000003	mRNA	95892289	95898078	-
GWHAAZE00000003	exon	95892289	95892590	-
GWHAAZE00000003	exon	95893196	95893705	-
GWHAAZE00000003	exon	95894582	95894782	-
GWHAAZE00000003	exon	95897665	95898078	-
GWHAAZE00000003	CDS	95897665	95898078	-
GWHAAZE00000003	CDS	95894582	95894782	-
GWHAAZE00000003	CDS	95893196	95893705	-
GWHAAZE00000003	CDS	95892519	95892590	-
GWHAAZE00000003	three_prime_UTR	95892289	95892518	-

Transcript Sequence
>GWHTAAZE013062 ATGCTTCAGGCAATTCCAACTCCACCTTCAGAACTCCTCTTCACAACCACCTCCCCTTCCATCACCGCCCTCTCTCCACTCCACCGCCCCTCACGCGTCGCCACACCCTCCTTCCCTGGCAACTCAGCCCCCCAATTCCGCTGTCAAGCGGCGGGATCAACGGCGGTTCCAGAGGCGCAACTGAAGAAGAAGAGCATATATGACATTGAAAACTTAACTACGTGGCTACTGAAGCAAGAACAAGAAGGAAATATTGATACGGAATTGACGATTGTGCTATCGAGTATTTCCTTGGCTTGTAAGCAAATAGGTTCACTGTTACAGAGATCTAGTATTATTAACCTTACTGGAGCTCAAGGGACTATTAATATCCAAGGGGAGGATCAGAAGAAACTTGATGTTATCTCCAATGAGTTATTCTGCAACTGCCTAAGATCAAGTGGGCGGACTGGGATTATAGCATCGGAGGAGGAAGATGTACCGGTTGCAGTTGAAGAGACGTACTCTGGAAACTACATTGTCGTGTTTGATCCAATCGATGGATCAGCCAACATCGACACTGCCTTAACCACTGGATCAATCTTCGGGATATATGGCCCTGATGAGCAGTGCCTCCTTGACCAAGCAAAAGAGAAGTGTGTTGTTAGTGTTTGTCAGCCAGGCACCAACCTATTAGCCGCTGGCTACTGCCTCTACTCGAGCTCACTGGTCTTCACAATCTCCATAGGCAATGGAGTTTTCGGATTCACCCTGGACTCCACATACGGCGAATTCATCTTGACACACGAAGACATCAAAATACCCAAATCAGGCAAAAGAATTTACTCATTCAACGAAGGAAACTACGACCTTTGGGACGAGAAACTGAAGAATTATCTTGATCATTTAAGGCAACCAGGCCCTGAGGGGAAACCTTATTCTGGCCGATATATCGGCTGTCTCGTGGGTGAAATACATAGAATGCTACTCTGTGGTGGAATATACGGGAACCCGAAGAATAAGAACAGCAAAAATGGGAATTTGAGGCTGTTATATGAGTGTGCGCCGATGAGTTATTTGGTTGAACAAGCTGGTGGGAAGGCTATTGATGGTCATAAGAGGATTCTTGATATAAAGCCTGAGCAGGTTCACCAGCGTACACCTATATTCATTGGAAGCGCGGATGAAATTGAAAAACTGGAGAGTTTCTTGGCCTGATTGAATTTTTCGTATTTTTCCTTACTGTTGTCAAATAATCCTCTTTTCCAATTTCATTCTTTTAATATTTCAATAATGATCAAGTTTTTCTTTTCTTTCTAAATATGTGATTTAGTTCAAAAAATTGTCCAAACGTCATAGCTTAAACGCGTTTCAGCACAGGTTAGTAATGGTGTATGTAGCGCACATACTTCGCTTTAATCAAAAAGATGAGATTCTTTGTTTTTAGA

Network for GWHGAAZE013048

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00316.21	FBPase	78	263	1.20E-51
PF18913.1	FBPase_C	268	396	1.20E-46

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K03841	FBP, fbp	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Glycolysis / Gluconeogenesis	map00010
		Pentose phosphate pathway	map00030
		Fructose and mannose metabolism	map00051
		Carbon fixation in photosynthetic organisms	map00710
		Methane metabolism	map00680
		AMPK signaling pathway	map04152
		Insulin signaling pathway	map04910
		Glucagon signaling pathway	map04922

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0016791	molecular_function	phosphatase activity
GO:0042132	molecular_function	fructose 1,6-bisphosphate 1-phosphatase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	24.657
	SRR3591706	second leaf	34.155
	SRR3591707	mature leaf	24.807
	SRR3591708	Shoot apex	24.214
	SRR3591709	Stem	13.203
	SRR3591710	White floral bud	15.207
	SRR3591711	White flower	11.044
	SRR3591712	Green floral bud	14.329
	SRR3591713	Yellow flower	7.668
SRP173429	SRR8316895	Juvenile bud stage	16.121
	SRR8316896	Juvenile bud stage	15.850
	SRR8316897	Juvenile bud stage	13.803
	SRR8316894	Third green stage	6.770
	SRR8316900	Third green stage	25.698
	SRR8316901	Third green stage	21.734
	SRR8316898	Complete white stage	8.034
	SRR8316899	Complete white stage	28.412
	SRR8316903	Complete white stage	12.647
	SRR8316902	Silver flowering stage	6.499
	SRR8316904	Silver flowering stage	8.552
	SRR8316905	Silver flowering stage	4.812
	SRR8316906	Gold flowering stage	11.795
	SRR8316907	Gold flowering stage	12.135
	SRR8316908	Gold flowering stage	12.219
SRP132670	SRR6706286	Control	23.951
	SRR6706287	Light intensity 50%	23.711
	SRR6706288	Light intensity 20%	27.296
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	12.666
	CNS0095593	Slightly white alabastrum(diploid) 2	18.697
	CNS0095594	Slightly white alabastrum(diploid) 3	11.391
	CNS0095595	Whole white alabastrum(diploid) 2	15.171
	CNS0095596	Whole white alabastrum(diploid) 3	12.999
	CNS0095597	Whole white alabastrum(diploid) 4	12.658
	CNS0095598	Silvery flower (diploied) 1	13.643
	CNS0095599	Silvery flower (diploied) 2	16.495
	CNS0095600	Silvery flower (diploied) 3	15.577
	CNS0095601	Golden flower (diploid) 1	17.519
	CNS0095602	Golden flower (diploid) 2	16.388
	CNS0095603	Golden flower (diploid) 3	15.673
	CNS0095604	Slightly white alabastrum(tetraploid) 1	13.172
	CNS0095605	Slightly white alabastrum(tetraploid) 2	11.636
	CNS0095606	Slightly white alabastrum(tetraploid) 3	19.198
	CNS0095607	Whole white alabastrum(tetraploid) 1	8.091
	CNS0095608	Whole white alabastrum(tetraploid) 2	11.105
	CNS0095609	Whole white alabastrum(tetraploid) 3	19.897
	CNS0095610	Silvery flower (diploied) 1	16.567
	CNS0095611	Silvery flower (diploied) 2	19.879
	CNS0095612	Silvery flower (diploied) 3	12.312
	CNS0095613	Golden flower (tetraploid) 1	12.880
	CNS0095614	Golden flower (tetraploid) 2	13.178
	CNS0095615	Golden flower (tetraploid) 3	13.377
CRA001975	CRR073297	Stem 1	19.294
	CRR073298	Stem 2	15.189
	CRR073299	Stem 3	15.289
	CRR073300	Leaf 1	11.508
	CRR073301	Leaf 2	14.200
	CRR073302	Leaf 3	13.041
	CRR073303	Juvenile bud 1	15.145
	CRR073304	Juvenile bud 2	9.327
	CRR073305	Juvenile bud 3	10.393
	CRR073306	Third green 1	6.475
	CRR073307	Third green 2	4.997
	CRR073308	Third green 3	7.358
	CRR073309	Second white 1	7.186
	CRR073310	Second white 2	4.395
	CRR073311	Second white 3	4.636
	CRR073312	Silver flowering 1	6.106
	CRR073313	Silver flowering 2	8.825
	CRR073314	Silver flowering 3	7.775
	CRR073315	Gold flowering 1	38.207
	CRR073316	Gold flowering 2	50.957
	CRR073317	Gold flowering 3	23.169
	CRR073318	Tawny withering 1	10.725
	CRR073319	Tawny withering 2	8.700
	CRR073320	Tawny withering 3	9.021