Detail information of GWHGAAZE013265


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009796861.15.65664E-35PREDICTED: uncharacterized protein LOC104243376 [Nicotiana sylvestris]
trEMBLtr|V7BJS3|V7BJS3_PHAVU2E-31Uncharacterized protein {ECO:0000313|EMBL:ESW17295.1}
TAIR10AT3G52740.14E-21Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9973891899739304-
GWHAAZE00000003mRNA9973891899739304-
GWHAAZE00000003exon9973891899739304-
GWHAAZE00000003CDS9973891899739304-
Transcript Sequence

Network for GWHGAAZE013265

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.544
SRR3591706second leaf17.036
SRR3591707mature leaf82.792
SRR3591708Shoot apex4.989
SRR3591709Stem10.464
SRR3591710White floral bud2.254
SRR3591711White flower2.054
SRR3591712Green floral bud0.318
SRR3591713Yellow flower0.206
SRP173429 SRR8316895Juvenile bud stage 3.120
SRR8316896Juvenile bud stage 1.855
SRR8316897Juvenile bud stage 0.904
SRR8316894Third green stage 1.418
SRR8316900Third green stage 4.480
SRR8316901Third green stage 4.852
SRR8316898Complete white stage 2.671
SRR8316899Complete white stage 2.988
SRR8316903Complete white stage 3.441
SRR8316902Silver flowering stage5.471
SRR8316904Silver flowering stage3.373
SRR8316905Silver flowering stage3.599
SRR8316906Gold flowering stage 6.408
SRR8316907Gold flowering stage 3.392
SRR8316908Gold flowering stage 6.794
SRP132670SRR6706286Control8.498
SRR6706287Light intensity 50%3.865
SRR6706288Light intensity 20%3.783
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.916
CNS0095593Slightly white alabastrum(diploid) 21.133
CNS0095594Slightly white alabastrum(diploid) 31.701
CNS0095595Whole white alabastrum(diploid) 21.147
CNS0095596Whole white alabastrum(diploid) 32.191
CNS0095597Whole white alabastrum(diploid) 44.272
CNS0095598Silvery flower (diploied) 14.331
CNS0095599Silvery flower (diploied) 22.262
CNS0095600Silvery flower (diploied) 34.955
CNS0095601Golden flower (diploid) 13.910
CNS0095602Golden flower (diploid) 23.463
CNS0095603Golden flower (diploid) 34.001
CNS0095604Slightly white alabastrum(tetraploid) 12.949
CNS0095605Slightly white alabastrum(tetraploid) 23.608
CNS0095606Slightly white alabastrum(tetraploid) 35.518
CNS0095607Whole white alabastrum(tetraploid) 11.457
CNS0095608Whole white alabastrum(tetraploid) 22.675
CNS0095609Whole white alabastrum(tetraploid) 32.511
CNS0095610Silvery flower (diploied) 116.716
CNS0095611Silvery flower (diploied) 25.583
CNS0095612Silvery flower (diploied) 31.184
CNS0095613Golden flower (tetraploid) 15.588
CNS0095614Golden flower (tetraploid) 218.164
CNS0095615Golden flower (tetraploid) 30.719
CRA001975CRR073297Stem 10.386
CRR073298Stem 20.856
CRR073299Stem 30.562
CRR073300Leaf 10.774
CRR073301Leaf 21.299
CRR073302Leaf 30.600
CRR073303Juvenile bud 10.349
CRR073304Juvenile bud 20.499
CRR073305Juvenile bud 30.773
CRR073306Third green 12.427
CRR073307Third green 20.967
CRR073308Third green 32.718
CRR073309Second white 10.180
CRR073310Second white 22.037
CRR073311Second white 32.263
CRR073312Silver flowering 10.682
CRR073313Silver flowering 20.264
CRR073314Silver flowering 32.429
CRR073315Gold flowering 114.080
CRR073316Gold flowering 218.853
CRR073317Gold flowering 315.159
CRR073318Tawny withering 16.029
CRR073319Tawny withering 24.916
CRR073320Tawny withering 33.655