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Detail information of GWHGAAZE013265
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_009796861.1
5.65664E-35
PREDICTED: uncharacterized protein LOC104243376 [Nicotiana sylvestris]
trEMBL
tr|V7BJS3|V7BJS3_PHAVU
2E-31
Uncharacterized protein {ECO:0000313|EMBL:ESW17295.1}
TAIR10
AT3G52740.1
4E-21
Without detailed annotation
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000003
gene
99738918
99739304
-
GWHAAZE00000003
mRNA
99738918
99739304
-
GWHAAZE00000003
exon
99738918
99739304
-
GWHAAZE00000003
CDS
99738918
99739304
-
Transcript Sequence
>GWHTAAZE013279 ATGACAGAACAAAAACCCACCACCATGAACAACAACTCCACCAATTCCACCCACCAAACCGGGTCAACCCACCCACCACAACCCAACACGCCCGCTGATCCCCGAGCCGGGTCCGACAACCTGGCTCTGGATTCTCCGTTGAGAGGTGAGGTGGAGGAGAGCGGTCGGGAGAGGCTGAAGAGGCTCCGGGTCGAGGTGGCGGGTCGGGTATGGATCCCGGATATATGGGGGCAAGAGGAACTTTTAAAAGACTGGATAGATTGTAATGCTTTTGATGCTTCTTTAGTGAACAATAATATAATCTCAGCTAGGGCTGCTTTGGTTCAAGAAGTAAGAGCAACAACAACAAATTCAGGGGTAGTTTTAAGAATAGAAAATAGTTGTTGA
Network for GWHGAAZE013265
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
--
--
--
--
--
Protein Sequence
>GWHPAAZE013272 MTEQKPTTMNNNSTNSTHQTGSTHPPQPNTPADPRAGSDNLALDSPLRGEVEESGRERLKRLRVEVAGRVWIPDIWGQEELLKDWIDCNAFDASLVNNNIISARAALVQEVRATTTNSGVVLRIENSC
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
3.544
SRR3591706
second leaf
17.036
SRR3591707
mature leaf
82.792
SRR3591708
Shoot apex
4.989
SRR3591709
Stem
10.464
SRR3591710
White floral bud
2.254
SRR3591711
White flower
2.054
SRR3591712
Green floral bud
0.318
SRR3591713
Yellow flower
0.206
SRP173429
SRR8316895
Juvenile bud stage
3.120
SRR8316896
Juvenile bud stage
1.855
SRR8316897
Juvenile bud stage
0.904
SRR8316894
Third green stage
1.418
SRR8316900
Third green stage
4.480
SRR8316901
Third green stage
4.852
SRR8316898
Complete white stage
2.671
SRR8316899
Complete white stage
2.988
SRR8316903
Complete white stage
3.441
SRR8316902
Silver flowering stage
5.471
SRR8316904
Silver flowering stage
3.373
SRR8316905
Silver flowering stage
3.599
SRR8316906
Gold flowering stage
6.408
SRR8316907
Gold flowering stage
3.392
SRR8316908
Gold flowering stage
6.794
SRP132670
SRR6706286
Control
8.498
SRR6706287
Light intensity 50%
3.865
SRR6706288
Light intensity 20%
3.783
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
2.916
CNS0095593
Slightly white alabastrum(diploid) 2
1.133
CNS0095594
Slightly white alabastrum(diploid) 3
1.701
CNS0095595
Whole white alabastrum(diploid) 2
1.147
CNS0095596
Whole white alabastrum(diploid) 3
2.191
CNS0095597
Whole white alabastrum(diploid) 4
4.272
CNS0095598
Silvery flower (diploied) 1
4.331
CNS0095599
Silvery flower (diploied) 2
2.262
CNS0095600
Silvery flower (diploied) 3
4.955
CNS0095601
Golden flower (diploid) 1
3.910
CNS0095602
Golden flower (diploid) 2
3.463
CNS0095603
Golden flower (diploid) 3
4.001
CNS0095604
Slightly white alabastrum(tetraploid) 1
2.949
CNS0095605
Slightly white alabastrum(tetraploid) 2
3.608
CNS0095606
Slightly white alabastrum(tetraploid) 3
5.518
CNS0095607
Whole white alabastrum(tetraploid) 1
1.457
CNS0095608
Whole white alabastrum(tetraploid) 2
2.675
CNS0095609
Whole white alabastrum(tetraploid) 3
2.511
CNS0095610
Silvery flower (diploied) 1
16.716
CNS0095611
Silvery flower (diploied) 2
5.583
CNS0095612
Silvery flower (diploied) 3
1.184
CNS0095613
Golden flower (tetraploid) 1
5.588
CNS0095614
Golden flower (tetraploid) 2
18.164
CNS0095615
Golden flower (tetraploid) 3
0.719
CRA001975
CRR073297
Stem 1
0.386
CRR073298
Stem 2
0.856
CRR073299
Stem 3
0.562
CRR073300
Leaf 1
0.774
CRR073301
Leaf 2
1.299
CRR073302
Leaf 3
0.600
CRR073303
Juvenile bud 1
0.349
CRR073304
Juvenile bud 2
0.499
CRR073305
Juvenile bud 3
0.773
CRR073306
Third green 1
2.427
CRR073307
Third green 2
0.967
CRR073308
Third green 3
2.718
CRR073309
Second white 1
0.180
CRR073310
Second white 2
2.037
CRR073311
Second white 3
2.263
CRR073312
Silver flowering 1
0.682
CRR073313
Silver flowering 2
0.264
CRR073314
Silver flowering 3
2.429
CRR073315
Gold flowering 1
14.080
CRR073316
Gold flowering 2
18.853
CRR073317
Gold flowering 3
15.159
CRR073318
Tawny withering 1
6.029
CRR073319
Tawny withering 2
4.916
CRR073320
Tawny withering 3
3.655