Detail information of GWHGAAZE013468


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009587058.14.19159E-69PREDICTED: 14-3-3-like protein [Nicotiana tomentosiformis]
Swissprottr|Q9C5W6|14312_ARATH5E-5814-3-3-like protein GF14 iota
trEMBLtr|M1CR89|M1CR89_SOLTU5E-73Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400072940}
TAIR10AT1G26480.11E-47general regulatory factor 12

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene103046905103048371-
GWHAAZE00000003mRNA103046905103048371-
GWHAAZE00000003exon103048174103048371-
GWHAAZE00000003exon103047151103047260-
GWHAAZE00000003exon103046905103047064-
GWHAAZE00000003CDS103048174103048371-
GWHAAZE00000003CDS103047151103047260-
GWHAAZE00000003CDS103046905103047064-
Transcript Sequence

Network for GWHGAAZE013468

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00244.212014/3/31674.10E-22
PF00244.212014/3/3661457.60E-40
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06630YWHAE MAPK signaling pathway - yeast map04011
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.419
SRR3591706second leaf2.455
SRR3591707mature leaf1.505
SRR3591708Shoot apex5.033
SRR3591709Stem0.802
SRR3591710White floral bud124.043
SRR3591711White flower2.790
SRR3591712Green floral bud241.385
SRR3591713Yellow flower1.265
SRP173429 SRR8316895Juvenile bud stage 37.621
SRR8316896Juvenile bud stage 158.858
SRR8316897Juvenile bud stage 90.497
SRR8316894Third green stage 66.227
SRR8316900Third green stage 230.012
SRR8316901Third green stage 240.204
SRR8316898Complete white stage 0.112
SRR8316899Complete white stage 3.707
SRR8316903Complete white stage 2.016
SRR8316902Silver flowering stage1.866
SRR8316904Silver flowering stage4.006
SRR8316905Silver flowering stage0.846
SRR8316906Gold flowering stage 0.481
SRR8316907Gold flowering stage 0.610
SRR8316908Gold flowering stage 0.224
SRP132670SRR6706286Control121.007
SRR6706287Light intensity 50%117.586
SRR6706288Light intensity 20%99.295
CNP0000432CNS0095592Slightly white alabastrum(diploid) 194.462
CNS0095593Slightly white alabastrum(diploid) 262.176
CNS0095594Slightly white alabastrum(diploid) 3114.868
CNS0095595Whole white alabastrum(diploid) 2103.326
CNS0095596Whole white alabastrum(diploid) 3140.224
CNS0095597Whole white alabastrum(diploid) 4139.700
CNS0095598Silvery flower (diploied) 12.247
CNS0095599Silvery flower (diploied) 28.675
CNS0095600Silvery flower (diploied) 34.579
CNS0095601Golden flower (diploid) 12.046
CNS0095602Golden flower (diploid) 23.028
CNS0095603Golden flower (diploid) 32.218
CNS0095604Slightly white alabastrum(tetraploid) 1169.312
CNS0095605Slightly white alabastrum(tetraploid) 2146.267
CNS0095606Slightly white alabastrum(tetraploid) 31.019
CNS0095607Whole white alabastrum(tetraploid) 1223.459
CNS0095608Whole white alabastrum(tetraploid) 2271.780
CNS0095609Whole white alabastrum(tetraploid) 3162.341
CNS0095610Silvery flower (diploied) 10.373
CNS0095611Silvery flower (diploied) 27.770
CNS0095612Silvery flower (diploied) 326.852
CNS0095613Golden flower (tetraploid) 11.146
CNS0095614Golden flower (tetraploid) 20.258
CNS0095615Golden flower (tetraploid) 311.881
CRA001975CRR073297Stem 168.120
CRR073298Stem 275.337
CRR073299Stem 341.715
CRR073300Leaf 1103.129
CRR073301Leaf 2108.109
CRR073302Leaf 387.604
CRR073303Juvenile bud 1108.307
CRR073304Juvenile bud 2130.434
CRR073305Juvenile bud 39.405
CRR073306Third green 170.763
CRR073307Third green 2103.102
CRR073308Third green 367.849
CRR073309Second white 16.234
CRR073310Second white 29.616
CRR073311Second white 314.392
CRR073312Silver flowering 165.913
CRR073313Silver flowering 259.355
CRR073314Silver flowering 324.975
CRR073315Gold flowering 175.164
CRR073316Gold flowering 214.657
CRR073317Gold flowering 344.189
CRR073318Tawny withering 158.423
CRR073319Tawny withering 239.800
CRR073320Tawny withering 354.263