Detail information of GWHGAAZE013584


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010652978.10PREDICTED: chaperone protein dnaJ 16 [Vitis vinifera]
Swissprottr|Q8VXV4|DNJ16_ARATH0Chaperone protein dnaJ 16
trEMBLtr|D7TNL0|D7TNL0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI32083.3}
TAIR10AT1G24120.15E-165ARG1-like 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene104851388104860132+
GWHAAZE00000003mRNA104851388104860132+
GWHAAZE00000003exon104851388104851524+
GWHAAZE00000003exon104852455104852626+
GWHAAZE00000003exon104852688104852770+
GWHAAZE00000003exon104852909104853020+
GWHAAZE00000003exon104853129104853233+
GWHAAZE00000003exon104853535104853585+
GWHAAZE00000003exon104859129104859218+
GWHAAZE00000003exon104859319104859427+
GWHAAZE00000003exon104859540104859688+
GWHAAZE00000003exon104859772104859825+
GWHAAZE00000003exon104859905104860132+
GWHAAZE00000003CDS104851388104851524+
GWHAAZE00000003CDS104852455104852626+
GWHAAZE00000003CDS104852688104852770+
GWHAAZE00000003CDS104852909104853020+
GWHAAZE00000003CDS104853129104853233+
GWHAAZE00000003CDS104853535104853585+
GWHAAZE00000003CDS104859129104859218+
GWHAAZE00000003CDS104859319104859427+
GWHAAZE00000003CDS104859540104859688+
GWHAAZE00000003CDS104859772104859825+
GWHAAZE00000003CDS104859905104860132+
Transcript Sequence

Network for GWHGAAZE013584

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00226.32DnaJ20823.80E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.353
SRR3591706second leaf14.768
SRR3591707mature leaf9.630
SRR3591708Shoot apex27.549
SRR3591709Stem57.064
SRR3591710White floral bud18.660
SRR3591711White flower22.512
SRR3591712Green floral bud20.896
SRR3591713Yellow flower22.276
SRP173429 SRR8316895Juvenile bud stage 16.715
SRR8316896Juvenile bud stage 19.494
SRR8316897Juvenile bud stage 9.446
SRR8316894Third green stage 8.697
SRR8316900Third green stage 21.538
SRR8316901Third green stage 22.878
SRR8316898Complete white stage 12.128
SRR8316899Complete white stage 31.577
SRR8316903Complete white stage 16.843
SRR8316902Silver flowering stage10.807
SRR8316904Silver flowering stage13.710
SRR8316905Silver flowering stage5.820
SRR8316906Gold flowering stage 25.109
SRR8316907Gold flowering stage 17.140
SRR8316908Gold flowering stage 20.587
SRP132670SRR6706286Control22.011
SRR6706287Light intensity 50%21.351
SRR6706288Light intensity 20%22.893
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.283
CNS0095593Slightly white alabastrum(diploid) 217.784
CNS0095594Slightly white alabastrum(diploid) 314.066
CNS0095595Whole white alabastrum(diploid) 216.584
CNS0095596Whole white alabastrum(diploid) 314.857
CNS0095597Whole white alabastrum(diploid) 418.022
CNS0095598Silvery flower (diploied) 121.311
CNS0095599Silvery flower (diploied) 215.770
CNS0095600Silvery flower (diploied) 324.358
CNS0095601Golden flower (diploid) 118.531
CNS0095602Golden flower (diploid) 224.688
CNS0095603Golden flower (diploid) 324.306
CNS0095604Slightly white alabastrum(tetraploid) 119.974
CNS0095605Slightly white alabastrum(tetraploid) 216.863
CNS0095606Slightly white alabastrum(tetraploid) 327.074
CNS0095607Whole white alabastrum(tetraploid) 117.831
CNS0095608Whole white alabastrum(tetraploid) 214.478
CNS0095609Whole white alabastrum(tetraploid) 320.639
CNS0095610Silvery flower (diploied) 126.076
CNS0095611Silvery flower (diploied) 226.455
CNS0095612Silvery flower (diploied) 327.664
CNS0095613Golden flower (tetraploid) 115.940
CNS0095614Golden flower (tetraploid) 220.586
CNS0095615Golden flower (tetraploid) 327.229
CRA001975CRR073297Stem 119.952
CRR073298Stem 220.392
CRR073299Stem 324.582
CRR073300Leaf 125.243
CRR073301Leaf 222.719
CRR073302Leaf 322.498
CRR073303Juvenile bud 118.000
CRR073304Juvenile bud 215.155
CRR073305Juvenile bud 318.049
CRR073306Third green 113.385
CRR073307Third green 214.482
CRR073308Third green 313.188
CRR073309Second white 111.943
CRR073310Second white 213.930
CRR073311Second white 313.979
CRR073312Silver flowering 112.061
CRR073313Silver flowering 29.014
CRR073314Silver flowering 37.375
CRR073315Gold flowering 116.306
CRR073316Gold flowering 224.842
CRR073317Gold flowering 316.198
CRR073318Tawny withering 124.161
CRR073319Tawny withering 219.515
CRR073320Tawny withering 333.557