Gene detail

Detail information of GWHGAAZE013661

Functional Annotation

Database	Orthologs	E value	Annotation
Swissprot	tr\|Q9SA34\|IMDH2_ARATH	0.000003	Inosine-5'-monophosphate dehydrogenase 2 {ECO:0000255\|HAMAP-Rule:MF_03156}
TAIR10	AT1G16350.1	0.000008	Aldolase-type TIM barrel family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	106077557	106080823	+
GWHAAZE00000003	mRNA	106077557	106080823	+
GWHAAZE00000003	exon	106077557	106077619	+
GWHAAZE00000003	exon	106077912	106077971	+
GWHAAZE00000003	exon	106078386	106078456	+
GWHAAZE00000003	exon	106078523	106078607	+
GWHAAZE00000003	exon	106078977	106079016	+
GWHAAZE00000003	exon	106080091	106080240	+
GWHAAZE00000003	exon	106080618	106080823	+
GWHAAZE00000003	CDS	106077557	106077619	+
GWHAAZE00000003	CDS	106077912	106077971	+
GWHAAZE00000003	CDS	106078386	106078456	+
GWHAAZE00000003	CDS	106078523	106078607	+
GWHAAZE00000003	CDS	106078977	106079016	+
GWHAAZE00000003	CDS	106080091	106080240	+
GWHAAZE00000003	CDS	106080618	106080823	+

Transcript Sequence
>GWHTAAZE013675 ATGTCCTTGTTGCAGTTCCTTGCCTTTTCTAGTAATCTGGAAGCTGCAGATGAGGGCAGACAGTGCAGCGAAGCAACTTGGTGTTTGCCCAAGCAAACTCCATCGACTGCCATGCTTGTCAATGGAATCCTCATAAAAAGAACTGTAGGAATGTCACTGGAGTTGGGAGATCTCAATTTTTCTGTGGCTCATCTTTTTGGGCACATCGTCAAAGCTTTGGTTCTGGGGGCATCAACGGTGATGAAGGGAAGTTTCTTAGCTGGCAGCAGTGAATTTCAGACAAAAGGGAAGGAGCCATTGCTTGTTGCAGTGGTAACTGGGAAGAAGGGGGTGGGCCTTCAGGTGAAAAATAGAGGCATGGGTAGGGGTGTAAAATCTAGACTAACAGTCCACAGTCGTGTATCAATGGCGGACACCACCGCACAAGTTAGCAGATCGAGAGACCTCGACAAGCTACTCCTCCGGCCAGACGGAGGACCGACCGAAATTGATATGGCCCGAGACCGACTGGTTTGTCCCGTTCGGTCTAGTAGTCGGATTGTATTTTGTTGGGACCGACAGTGTCGGTTTGGTCTGTCATCAAGGCCAACGGGTCGGTTCACTGACCGGGGAACACCCCTAGGCATGGGATCCCTAGAAGCACGACAAAGGGGGAGTGATGCTCGTCGATATTAG

Network for GWHGAAZE013661

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00088	IMPDH, guaB	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Purine metabolism	map00230
		Drug metabolism - other enzymes	map00983

Gene Ontology

GO term	Ontology	Name
GO:0003824	molecular_function	catalytic activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	4.313
	SRR3591706	second leaf	3.879
	SRR3591707	mature leaf	5.253
	SRR3591708	Shoot apex	8.390
	SRR3591709	Stem	5.363
	SRR3591710	White floral bud	4.709
	SRR3591711	White flower	3.878
	SRR3591712	Green floral bud	7.690
	SRR3591713	Yellow flower	3.588
SRP173429	SRR8316895	Juvenile bud stage	2.899
	SRR8316896	Juvenile bud stage	4.646
	SRR8316897	Juvenile bud stage	2.232
	SRR8316894	Third green stage	1.967
	SRR8316900	Third green stage	5.722
	SRR8316901	Third green stage	5.061
	SRR8316898	Complete white stage	2.147
	SRR8316899	Complete white stage	5.817
	SRR8316903	Complete white stage	3.036
	SRR8316902	Silver flowering stage	2.401
	SRR8316904	Silver flowering stage	3.547
	SRR8316905	Silver flowering stage	1.511
	SRR8316906	Gold flowering stage	5.493
	SRR8316907	Gold flowering stage	4.907
	SRR8316908	Gold flowering stage	5.563
SRP132670	SRR6706286	Control	7.899
	SRR6706287	Light intensity 50%	7.769
	SRR6706288	Light intensity 20%	6.845
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.842
	CNS0095593	Slightly white alabastrum(diploid) 2	7.340
	CNS0095594	Slightly white alabastrum(diploid) 3	4.743
	CNS0095595	Whole white alabastrum(diploid) 2	4.567
	CNS0095596	Whole white alabastrum(diploid) 3	6.273
	CNS0095597	Whole white alabastrum(diploid) 4	8.580
	CNS0095598	Silvery flower (diploied) 1	6.841
	CNS0095599	Silvery flower (diploied) 2	4.333
	CNS0095600	Silvery flower (diploied) 3	2.847
	CNS0095601	Golden flower (diploid) 1	6.045
	CNS0095602	Golden flower (diploid) 2	2.365
	CNS0095603	Golden flower (diploid) 3	2.517
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.840
	CNS0095605	Slightly white alabastrum(tetraploid) 2	6.706
	CNS0095606	Slightly white alabastrum(tetraploid) 3	6.340
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.227
	CNS0095608	Whole white alabastrum(tetraploid) 2	4.062
	CNS0095609	Whole white alabastrum(tetraploid) 3	6.411
	CNS0095610	Silvery flower (diploied) 1	4.021
	CNS0095611	Silvery flower (diploied) 2	2.718
	CNS0095612	Silvery flower (diploied) 3	4.894
	CNS0095613	Golden flower (tetraploid) 1	5.481
	CNS0095614	Golden flower (tetraploid) 2	4.104
	CNS0095615	Golden flower (tetraploid) 3	2.698
CRA001975	CRR073297	Stem 1	6.958
	CRR073298	Stem 2	5.683
	CRR073299	Stem 3	3.160
	CRR073300	Leaf 1	6.124
	CRR073301	Leaf 2	8.040
	CRR073302	Leaf 3	3.208
	CRR073303	Juvenile bud 1	2.571
	CRR073304	Juvenile bud 2	0.931
	CRR073305	Juvenile bud 3	2.730
	CRR073306	Third green 1	0.589
	CRR073307	Third green 2	0.283
	CRR073308	Third green 3	0.620
	CRR073309	Second white 1	0.034
	CRR073310	Second white 2	0.750
	CRR073311	Second white 3	0.848
	CRR073312	Silver flowering 1	0.589
	CRR073313	Silver flowering 2	0.449
	CRR073314	Silver flowering 3	0.834
	CRR073315	Gold flowering 1	2.337
	CRR073316	Gold flowering 2	1.682
	CRR073317	Gold flowering 3	0.275
	CRR073318	Tawny withering 1	1.946
	CRR073319	Tawny withering 2	4.868
	CRR073320	Tawny withering 3	4.011