Gene detail

Detail information of GWHGAAZE013778

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_011074054.1	PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Sesamum indicum]
Swissprot	tr\|Q41140\|PFPA_RICCO	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha {ECO:0000255\|HAMAP-Rule:MF_03185}
trEMBL	tr\|K4DH49\|K4DH49_SOLLC	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc12g095760.1.1}
TAIR10	AT1G76550.1	Phosphofructokinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	338996	346507	+
GWHAAZE00000004	mRNA	338996	346507	+
GWHAAZE00000004	exon	338996	339085	+
GWHAAZE00000004	exon	340105	340277	+
GWHAAZE00000004	exon	340597	340709	+
GWHAAZE00000004	exon	341105	341179	+
GWHAAZE00000004	exon	341266	341379	+
GWHAAZE00000004	exon	341477	341544	+
GWHAAZE00000004	exon	342346	342399	+
GWHAAZE00000004	exon	342668	342748	+
GWHAAZE00000004	exon	342844	342937	+
GWHAAZE00000004	exon	343016	343089	+
GWHAAZE00000004	exon	343255	343365	+
GWHAAZE00000004	exon	343448	343492	+
GWHAAZE00000004	exon	343589	343645	+
GWHAAZE00000004	exon	344630	344734	+
GWHAAZE00000004	exon	344835	344951	+
GWHAAZE00000004	exon	345251	345354	+
GWHAAZE00000004	exon	345555	345720	+
GWHAAZE00000004	exon	346381	346507	+
GWHAAZE00000004	CDS	338996	339085	+
GWHAAZE00000004	CDS	340105	340277	+
GWHAAZE00000004	CDS	340597	340709	+
GWHAAZE00000004	CDS	341105	341179	+
GWHAAZE00000004	CDS	341266	341379	+
GWHAAZE00000004	CDS	341477	341544	+
GWHAAZE00000004	CDS	342346	342399	+
GWHAAZE00000004	CDS	342668	342748	+
GWHAAZE00000004	CDS	342844	342937	+
GWHAAZE00000004	CDS	343016	343089	+
GWHAAZE00000004	CDS	343255	343365	+
GWHAAZE00000004	CDS	343448	343492	+
GWHAAZE00000004	CDS	343589	343645	+
GWHAAZE00000004	CDS	344630	344734	+
GWHAAZE00000004	CDS	344835	344951	+
GWHAAZE00000004	CDS	345251	345354	+
GWHAAZE00000004	CDS	345555	345720	+
GWHAAZE00000004	CDS	346381	346500	+
GWHAAZE00000004	three_prime_UTR	346501	346507	+

Transcript Sequence
>GWHTAAZE013792 ATGGATTCAGACTTTGGGGTACCGAGAGAACTATCTGATCTGCAAAAGCTCCGATCTCTTTACAAGCCGGAGATTCCACCATGCCTTCAGGGAACTACCGTGAGAGTGGAATTTGGTGATGCAACAGCTGCTGCCGATCCATCTGGTGCTCACACCATAAGTCGATCCTTTCCTCACACTTATGGCCAGCCTTTAGCTCACTTCCTTAGAGCTACTGCAAAGGTCTCTGATGCTCAGATCATTAGTGAGCATCCATCAATTAGAGTTGGACTGGTTTTCTGCGGTAGACAGTCTCCTGGAGGACACAACGTCGTATGGGGTCTTTACAATGCTCTCAAAACTCACAACCCTAACAGTACATTGCTTGGATTCCTGGGTGGTTCTGAAGGTTTATTTGCACAAAAGACACTTGAGATCACAGATGACATTTTAGCAACCTACAAAAATCAAGGTGGTTATGATTTATTGGGACGAACAAAGGATCAAATTAGGACAATTGAGCAAGTCAATGCTGCTCAAACTGCGTGCACTGCTTTGAAGCTGGATAGTCTTGTGGTCATTGGAGGGGTAACGTCAAACACGGATGCTGCTCAGCTTGCTGAAACTTTTGCAGAAGCAAAATGCCCTACAAAGGTCAATTCCCAGCTCATTAGCAACGTTTGCACTGATGCTCTGTCGGCGGAGAAGTACTATTATTTCATCCGGCTCATGGGACGAAAGGCATCACATGTTGCCTTGGAATGCACTCTCCAGTCACATCCAAACATGGTTATCCTTGGTGAGGAGGTGGCTGCATCAAAACTTACACTTTTTGACCTGACAAAACAAATATGTGATGCAGTGCAAGCCCGGGCAGAACAAGACAAGAACCATGGTGTCATCCTACTACCAGAGGGGCTAATAGAAAGCATACCTGAAGTGCATGCTCTCTTGCAGGAAATTCATGGTTTGCTGAGACATGGCGTTTCTGTCGATAGCATTTCATCTAAGCTCTCACCGTGGGCATCTGCTTTGTTTGAATTTTTACCACCCTTCATTAGAAAACAGCTGCTCCTCTATCCAGAATCAGATGACTCTGCACAGTTATCCCAGATTGAGACGGAGAAATTGCTAGCTCATCTTGTGGAGGAAGAAATGAACAGGCGATTGAAAGAAGGAACATACAAGGGGAAGAAATTCAATGCTATCTGCCACTTCTTTGGCTACCAAGCTCGAGGATCATTGCCATCAAAGTTTGATTGTGACTATGCCTATGTTCTTGGGCACATCTGTTACCATATCCTTGCAGCTGGTCTAAATGGCTACATGGCAACTGTGACTAACCTCAAGAGTCCTGTAAACAAGTGGCGTTGCGGTGCTGCTCCAATAACGGCGATGATGACTGTAAAGCGTTATGGCCATGGCAATGGGGCCTCATCAATTGGAAAACCTGCTGTGCATCCTGCTACTGTAGATTTGAAAGGCAAATCATACGAGCTGTTGAGGCAAAATGCTACAAAATTTTTGATGGACGATGTCTACCGAAACCCAGGACCTCTGCAGTTTGATGGTCCAGGTGCTGATTCTAAGGTGGTAACGTTGTGCGTTGAGGACCAGGATTACATGGGTCGCATCAAGGAATTGCAGGAATATCTTGACAAGGTGCGAACCATTGTGAAACCGGGGTGTTCACAAGACGTTCTGAAGGCGGCTTTGAGTGCAATGGCTTCGCTTACAGCCATTCTCTCTTTGATGTCCTCACCTTCAAACACGGGGGTTTAGAAGTAGA

Network for GWHGAAZE013778

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00365.21	PFK	88	205	1.20E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00895	pfp, PFP	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Glycolysis / Gluconeogenesis	map00010
		Pentose phosphate pathway	map00030
		Fructose and mannose metabolism	map00051

Gene Ontology

GO term	Ontology	Name
GO:0006096	biological_process	glycolytic process
GO:0005524	molecular_function	ATP binding
GO:0047334	molecular_function	diphosphate-fructose-6-phosphate 1-phosphotransferase activity
GO:0003872	molecular_function	6-phosphofructokinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	294.400
	SRR3591706	second leaf	118.732
	SRR3591707	mature leaf	43.347
	SRR3591708	Shoot apex	198.853
	SRR3591709	Stem	178.824
	SRR3591710	White floral bud	170.930
	SRR3591711	White flower	161.756
	SRR3591712	Green floral bud	231.457
	SRR3591713	Yellow flower	146.617
SRP173429	SRR8316895	Juvenile bud stage	107.210
	SRR8316896	Juvenile bud stage	149.110
	SRR8316897	Juvenile bud stage	79.843
	SRR8316894	Third green stage	71.099
	SRR8316900	Third green stage	221.604
	SRR8316901	Third green stage	178.811
	SRR8316898	Complete white stage	52.355
	SRR8316899	Complete white stage	165.220
	SRR8316903	Complete white stage	77.902
	SRR8316902	Silver flowering stage	39.616
	SRR8316904	Silver flowering stage	53.766
	SRR8316905	Silver flowering stage	27.069
	SRR8316906	Gold flowering stage	74.211
	SRR8316907	Gold flowering stage	73.974
	SRR8316908	Gold flowering stage	85.931
SRP132670	SRR6706286	Control	215.785
	SRR6706287	Light intensity 50%	245.609
	SRR6706288	Light intensity 20%	269.585
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	159.846
	CNS0095593	Slightly white alabastrum(diploid) 2	167.686
	CNS0095594	Slightly white alabastrum(diploid) 3	145.062
	CNS0095595	Whole white alabastrum(diploid) 2	143.344
	CNS0095596	Whole white alabastrum(diploid) 3	162.647
	CNS0095597	Whole white alabastrum(diploid) 4	135.029
	CNS0095598	Silvery flower (diploied) 1	93.023
	CNS0095599	Silvery flower (diploied) 2	108.426
	CNS0095600	Silvery flower (diploied) 3	102.911
	CNS0095601	Golden flower (diploid) 1	82.597
	CNS0095602	Golden flower (diploid) 2	99.523
	CNS0095603	Golden flower (diploid) 3	99.363
	CNS0095604	Slightly white alabastrum(tetraploid) 1	195.217
	CNS0095605	Slightly white alabastrum(tetraploid) 2	164.759
	CNS0095606	Slightly white alabastrum(tetraploid) 3	288.811
	CNS0095607	Whole white alabastrum(tetraploid) 1	117.785
	CNS0095608	Whole white alabastrum(tetraploid) 2	111.363
	CNS0095609	Whole white alabastrum(tetraploid) 3	242.594
	CNS0095610	Silvery flower (diploied) 1	123.247
	CNS0095611	Silvery flower (diploied) 2	115.767
	CNS0095612	Silvery flower (diploied) 3	100.200
	CNS0095613	Golden flower (tetraploid) 1	59.222
	CNS0095614	Golden flower (tetraploid) 2	115.078
	CNS0095615	Golden flower (tetraploid) 3	46.087
CRA001975	CRR073297	Stem 1	231.083
	CRR073298	Stem 2	220.249
	CRR073299	Stem 3	251.899
	CRR073300	Leaf 1	263.538
	CRR073301	Leaf 2	255.064
	CRR073302	Leaf 3	299.692
	CRR073303	Juvenile bud 1	280.040
	CRR073304	Juvenile bud 2	251.935
	CRR073305	Juvenile bud 3	287.769
	CRR073306	Third green 1	89.098
	CRR073307	Third green 2	76.676
	CRR073308	Third green 3	85.761
	CRR073309	Second white 1	72.869
	CRR073310	Second white 2	48.593
	CRR073311	Second white 3	41.212
	CRR073312	Silver flowering 1	41.920
	CRR073313	Silver flowering 2	46.501
	CRR073314	Silver flowering 3	38.877
	CRR073315	Gold flowering 1	62.577
	CRR073316	Gold flowering 2	72.126
	CRR073317	Gold flowering 3	74.878
	CRR073318	Tawny withering 1	212.040
	CRR073319	Tawny withering 2	153.570
	CRR073320	Tawny withering 3	218.138