Gene detail

Detail information of GWHGAAZE013899

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_010664095.1	PREDICTED: prolyl endopeptidase isoform X2 [Vitis vinifera]
trEMBL	tr\|A0A078JVT3\|A0A078JVT3_BRANA	BnaCnng64630D protein {ECO:0000313\|EMBL:CDY69652.1}
TAIR10	AT1G76140.2	Prolyl oligopeptidase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	2409983	2414576	+
GWHAAZE00000004	mRNA	2409983	2414576	+
GWHAAZE00000004	exon	2409983	2410201	+
GWHAAZE00000004	exon	2410295	2410537	+
GWHAAZE00000004	exon	2410644	2410714	+
GWHAAZE00000004	exon	2410984	2411146	+
GWHAAZE00000004	exon	2411295	2411888	+
GWHAAZE00000004	exon	2412164	2412544	+
GWHAAZE00000004	exon	2412648	2413006	+
GWHAAZE00000004	exon	2413114	2413249	+
GWHAAZE00000004	exon	2413846	2413959	+
GWHAAZE00000004	exon	2414046	2414576	+
GWHAAZE00000004	CDS	2409983	2410201	+
GWHAAZE00000004	CDS	2410295	2410537	+
GWHAAZE00000004	CDS	2410644	2410714	+
GWHAAZE00000004	CDS	2410984	2411146	+
GWHAAZE00000004	CDS	2411295	2411888	+
GWHAAZE00000004	CDS	2412164	2412544	+
GWHAAZE00000004	CDS	2412648	2413006	+
GWHAAZE00000004	CDS	2413114	2413249	+
GWHAAZE00000004	CDS	2413846	2413959	+
GWHAAZE00000004	CDS	2414046	2414111	+
GWHAAZE00000004	three_prime_UTR	2414112	2414576	+

Transcript Sequence
>GWHTAAZE013913 CTTGAGGATCCTGATTCAGTAGAGGTGAAAGATTTTGTGCAGAAGCAAGTGGAGTTAACCGAATCGGTGCTTAAAAAGTGCGATACGAGAGAAAAGCTTCGGGAGAAGCTTACAAAGCTCTATGATTATCCTCGTTATGATGCTCCCTTCAGGCAAGCAGACAAGTTGTTTTACTTCCATAACACCGGTCTTCAACCCCAGAAAGTTCTCTACATGCAGCATAGTTATAGTTTGAGTTTGGATTTGGATGGAGAAGAACCTCCTCCTCCTCCTCCTCCTCCGGAGGTTTTGCTTGATCCCAATGGACTCAGCGAGGACGGAACGGTGTCGTTGAACACATTTGCCGTAAGTGAAGATGCCAAATACCTGGGTTATGGCATTAGTTCCAGTGGAAGCGATTGGGTCACTATCAAAGTAATGAGGATAGAGGACAAGAGGGTCGAGCCTGATACTCTCTCATGGGTCAAATTTTCAGCTATTAATTGGACCCATGATGGCAAAGGTTTTTTCTACAGCCGGTACCCGGCTCCCAAGGAGGGGGGGAAGTTGGATGCAGGGACAGAGACCAATGTTAATCTGTATAATCAACTGTATTATCATTTCTTGGGTACCGATCAGTCCGAAGATATTTTATGTTGGAAAGATCCCGAGAATCCGAAATATTCATTCGGAGCCTCTGTAACAGAAGATGGGAAGTATGTTCTTCTATACACCCACGAGACTTGTGATCCTTCCAACAAAGTTTATTATTGTGACATCTCTTCCTTACCTAATGGAATTGAAGGTTATAGGGGGAAGGAGGAGCTCCTCCCTTTCGTTAAGCTTATTGACAGGTTTGATGGAGGTTATCACGCTATTGCAAATGATGACACTGTTTTTACCTTTTTAACTAACAAGGATGCTCCGAAATACAAGTTAGTCAGAGTAGATCTTAAGGAACCAAGTACTTGGACAGAAGTTCTCCCAGAATCTGAAAAAGATGTTCTTGAATCCGCTGTTGCTGTTAATGGCAGTCAATTTATTGCAAGTTATTTGAGTGATGTTAAGCATGTTCTCCAGTTAAGGGACCTGAAAACAGGTGCCCTACTGCACCCTTTGCCCATTGATATAGGCAGTGTATATGATATTTGTGCCCGAAGAGAAGACAACATGTTTTTCATTGGGTTTACAAGCTTCCTTACTCCTGGTATTATATATCAATGCAACCTAGAAAGTGGGGTTCCGGAAATGAAAATTTTTCGTGAAATTGTTGTTCCTGGATTTGATCGGTCCGAGTTTCAAATTAATCAGGTTTTTGTGCCTAGTAAGGATGGTATCAAAATACCAATGTTCATAGTGGCTAGAAAAGATATTCTTCTTGATGGATCACACCCATGCCTGTTATACGGATACGGTGGATTTAACATTAGTATTACTCCATCATTTAGTGTCAGTCGTATCGTGCTTGCTAGGCATTTAGGCACTATCTTCTGCACAGCAAATATTCGTGGTGGCGGTGAGTATGGAGAAGAATGGCATAAAGATGGTGCGCTTGGGAAAAAGCAGAATTGTTTTGATGACTTCATTTCTGCGGCTGAGTATCTTGTATCTGCTGGCTATACCGAGCCCAAGAAGTTGTGTATTGAAGGGGGAAGCAACGGTGGGCTTCTTATAGGGGCCTGCATCAATCAGAGACCTGATCTTTTTGGCTGTGCTCTTGCTCATGTCGGTGTTATGGACATGCTTAGATTTCACAAGTTCACAATAGGCAAGTCTGGATTGCTTGATTTGATGAAGTTATGGTGTGAGCCCAGAGTTTGTTAAAAAAAAATAAAAAAAAATTCATTTTGGGTTTTTAATACTCCGTACCTTTTTTTGCCTTCTATTTCTGTTTTCCCTAGGCCATGCATGGACTTCAGATTTTGGCTGCTCAGAAAAGGAGGAAGAGTTCAATTGGCTAATCAAGTGAGTACTTTCATCTTCATTAGGCTGTGTGGGCGCATCTGCGTTGTCCATAGGGGATTGATGTCTATGGGGGCTTGCATCAATCCGTACTCACCATTACACAATGTAAGGAGACCATGGGAAAATTCTTCAGATCCAGCTTCCCAGTACCCACCAACATTGCTACTGACAGCTGATCATGATGATCGGGTTGTGCCCTTGCACTCGTTAAAATTGTTGGCGACCATGCAATATGTTCTATGCACAAGCGTGGAGAAAAGCCCCCAGACCAACCCAATTATCGCCAGAATTGATTGCAAAGCTGGGCATGGAGGTGGACGTCCTCTGCAGAAAGTGATTGATGAATGTGCCGATGCGTTTTCCTTTATGGCCAAGATGTTGGGTGCATCCTGGATTGAATAGATAATGTTAACTCCATAATAAGGTCCCATAGCAAAGGCTGGACGATTACAATACTCTCAATGTGCCTGAATGTGGAGCGGAAATTGCATGCATGTGGACTGACTCTACGCAAAGCAAGCACTGCAATTCTCATGCACATATAGTTTCATGTTGTGCTCATAGCGATTCTGGTCATATTTTACCAAATAAATATTTTAGGTATTTGAACTGGTCGAGTAAATTTAGCTGTTATGGTTTTTACTTTATTTGTTTTAAGTCCGTAAATTAGGAACTTGGCTGTTTGTTTTTTACTTTTATGATATGATAATAAATACGCTTTTGCTTCTTCCCATGTATAACCCCAAATTTGCAATTTTGAGGACTGATGCATGCGATCTAATGTTTGCGTCCTTAGGTTCAGAGGGCGAATGTGGGAAAGTAATATTTATAAATGAATGTTGCATACAAATGATTTTTGATTTAACA

Network for GWHGAAZE013899

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02897.16	Peptidase_S9_N	1	409	9.80E-121
PF00326.22	Peptidase_S9	473	581	4.30E-39
PF00326.22	Peptidase_S9	675	775	2.40E-13

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01322	PREP	Renin-angiotensin system	map04614

Gene Ontology

GO term	Ontology	Name
GO:0006508	biological_process	proteolysis
GO:0004252	molecular_function	serine-type endopeptidase activity
GO:0070008	molecular_function	serine-type exopeptidase activity
GO:0008236	molecular_function	serine-type peptidase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	48.419
	SRR3591706	second leaf	40.114
	SRR3591707	mature leaf	123.759
	SRR3591708	Shoot apex	46.734
	SRR3591709	Stem	26.850
	SRR3591710	White floral bud	36.996
	SRR3591711	White flower	57.892
	SRR3591712	Green floral bud	50.279
	SRR3591713	Yellow flower	78.185
SRP173429	SRR8316895	Juvenile bud stage	53.998
	SRR8316896	Juvenile bud stage	78.954
	SRR8316897	Juvenile bud stage	33.513
	SRR8316894	Third green stage	23.697
	SRR8316900	Third green stage	77.255
	SRR8316901	Third green stage	63.779
	SRR8316898	Complete white stage	19.735
	SRR8316899	Complete white stage	69.026
	SRR8316903	Complete white stage	32.304
	SRR8316902	Silver flowering stage	18.931
	SRR8316904	Silver flowering stage	29.901
	SRR8316905	Silver flowering stage	14.647
	SRR8316906	Gold flowering stage	62.913
	SRR8316907	Gold flowering stage	56.376
	SRR8316908	Gold flowering stage	66.621
SRP132670	SRR6706286	Control	332.914
	SRR6706287	Light intensity 50%	155.851
	SRR6706288	Light intensity 20%	104.653
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	53.444
	CNS0095593	Slightly white alabastrum(diploid) 2	40.578
	CNS0095594	Slightly white alabastrum(diploid) 3	49.293
	CNS0095595	Whole white alabastrum(diploid) 2	41.311
	CNS0095596	Whole white alabastrum(diploid) 3	48.920
	CNS0095597	Whole white alabastrum(diploid) 4	42.473
	CNS0095598	Silvery flower (diploied) 1	41.573
	CNS0095599	Silvery flower (diploied) 2	40.974
	CNS0095600	Silvery flower (diploied) 3	70.390
	CNS0095601	Golden flower (diploid) 1	38.816
	CNS0095602	Golden flower (diploid) 2	87.115
	CNS0095603	Golden flower (diploid) 3	86.148
	CNS0095604	Slightly white alabastrum(tetraploid) 1	49.179
	CNS0095605	Slightly white alabastrum(tetraploid) 2	40.198
	CNS0095606	Slightly white alabastrum(tetraploid) 3	68.188
	CNS0095607	Whole white alabastrum(tetraploid) 1	39.971
	CNS0095608	Whole white alabastrum(tetraploid) 2	37.150
	CNS0095609	Whole white alabastrum(tetraploid) 3	61.619
	CNS0095610	Silvery flower (diploied) 1	95.320
	CNS0095611	Silvery flower (diploied) 2	104.701
	CNS0095612	Silvery flower (diploied) 3	82.024
	CNS0095613	Golden flower (tetraploid) 1	88.251
	CNS0095614	Golden flower (tetraploid) 2	110.443
	CNS0095615	Golden flower (tetraploid) 3	106.307
CRA001975	CRR073297	Stem 1	65.602
	CRR073298	Stem 2	76.875
	CRR073299	Stem 3	63.861
	CRR073300	Leaf 1	67.800
	CRR073301	Leaf 2	80.239
	CRR073302	Leaf 3	55.925
	CRR073303	Juvenile bud 1	59.171
	CRR073304	Juvenile bud 2	49.738
	CRR073305	Juvenile bud 3	72.135
	CRR073306	Third green 1	20.115
	CRR073307	Third green 2	18.648
	CRR073308	Third green 3	25.344
	CRR073309	Second white 1	34.007
	CRR073310	Second white 2	30.094
	CRR073311	Second white 3	35.307
	CRR073312	Silver flowering 1	35.874
	CRR073313	Silver flowering 2	38.040
	CRR073314	Silver flowering 3	33.614
	CRR073315	Gold flowering 1	611.391
	CRR073316	Gold flowering 2	917.632
	CRR073317	Gold flowering 3	803.949
	CRR073318	Tawny withering 1	52.540
	CRR073319	Tawny withering 2	52.508
	CRR073320	Tawny withering 3	35.653