Detail information of GWHGAAZE013965


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007017600.11.2267E-158Jasmonic acid carboxyl methyltransferase [Theobroma cacao]
Swissprottr|Q9SBK6|JMT_BRARP1E-124Jasmonate O-methyltransferase
trEMBLtr|A0A061FBW2|A0A061FBW2_THECC5E-159Jasmonic acid carboxyl methyltransferase {ECO:0000313|EMBL:EOY14825.1}
TAIR10AT1G19640.11E-97jasmonic acid carboxyl methyltransferase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene36227303625768+
GWHAAZE00000004mRNA36227303625768+
GWHAAZE00000004exon36227303623146+
GWHAAZE00000004exon36245213624793+
GWHAAZE00000004exon36253853625768+
GWHAAZE00000004CDS36227303623146+
GWHAAZE00000004CDS36245213624793+
GWHAAZE00000004CDS36253853625768+
Transcript Sequence

Network for GWHGAAZE013965

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03492.16Methyltransf_7183551.30E-122
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K08241E2.1.1.141 Biosynthesis of secondary metabolites map01110
alpha-Linolenic acid metabolismmap00592

Gene Ontology

GO term OntologyName
GO:0008168molecular_functionmethyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.123
SRR3591706second leaf199.283
SRR3591707mature leaf201.190
SRR3591708Shoot apex72.372
SRR3591709Stem12.887
SRR3591710White floral bud203.144
SRR3591711White flower472.483
SRR3591712Green floral bud29.122
SRR3591713Yellow flower618.790
SRP173429 SRR8316895Juvenile bud stage 34.965
SRR8316896Juvenile bud stage 19.257
SRR8316897Juvenile bud stage 24.923
SRR8316894Third green stage 7.267
SRR8316900Third green stage 23.556
SRR8316901Third green stage 40.411
SRR8316898Complete white stage 62.371
SRR8316899Complete white stage 64.345
SRR8316903Complete white stage 111.038
SRR8316902Silver flowering stage209.117
SRR8316904Silver flowering stage286.572
SRR8316905Silver flowering stage157.770
SRR8316906Gold flowering stage 552.284
SRR8316907Gold flowering stage 555.586
SRR8316908Gold flowering stage 677.239
SRP132670SRR6706286Control73.328
SRR6706287Light intensity 50%71.180
SRR6706288Light intensity 20%71.065
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.581
CNS0095593Slightly white alabastrum(diploid) 222.437
CNS0095594Slightly white alabastrum(diploid) 328.673
CNS0095595Whole white alabastrum(diploid) 221.268
CNS0095596Whole white alabastrum(diploid) 315.699
CNS0095597Whole white alabastrum(diploid) 419.362
CNS0095598Silvery flower (diploied) 164.675
CNS0095599Silvery flower (diploied) 2115.187
CNS0095600Silvery flower (diploied) 3192.376
CNS0095601Golden flower (diploid) 1124.347
CNS0095602Golden flower (diploid) 2202.722
CNS0095603Golden flower (diploid) 3202.351
CNS0095604Slightly white alabastrum(tetraploid) 133.366
CNS0095605Slightly white alabastrum(tetraploid) 236.160
CNS0095606Slightly white alabastrum(tetraploid) 341.955
CNS0095607Whole white alabastrum(tetraploid) 128.813
CNS0095608Whole white alabastrum(tetraploid) 221.488
CNS0095609Whole white alabastrum(tetraploid) 336.760
CNS0095610Silvery flower (diploied) 1340.637
CNS0095611Silvery flower (diploied) 2248.881
CNS0095612Silvery flower (diploied) 3221.540
CNS0095613Golden flower (tetraploid) 1510.291
CNS0095614Golden flower (tetraploid) 2457.166
CNS0095615Golden flower (tetraploid) 3574.235
CRA001975CRR073297Stem 17.607
CRR073298Stem 27.052
CRR073299Stem 38.348
CRR073300Leaf 110.501
CRR073301Leaf 28.074
CRR073302Leaf 314.545
CRR073303Juvenile bud 113.093
CRR073304Juvenile bud 231.402
CRR073305Juvenile bud 311.114
CRR073306Third green 1734.035
CRR073307Third green 2665.731
CRR073308Third green 3584.893
CRR073309Second white 1535.349
CRR073310Second white 2724.406
CRR073311Second white 3622.150
CRR073312Silver flowering 1523.844
CRR073313Silver flowering 2470.207
CRR073314Silver flowering 3522.996
CRR073315Gold flowering 13.253
CRR073316Gold flowering 27.798
CRR073317Gold flowering 32.170
CRR073318Tawny withering 15.321
CRR073319Tawny withering 225.020
CRR073320Tawny withering 31.228