Gene detail

Detail information of GWHGAAZE014135

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_008360985.1	0	PREDICTED: probable isoaspartyl peptidase/L-asparaginase 2 [Malus domestica]
Swissprot	tr\|Q8GXG1\|ASPGB_ARATH	0	Isoaspartyl peptidase/L-asparaginase 2 subunit beta (Precursor)
trEMBL	tr\|M1ADV5\|M1ADV5_SOLTU	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400020647}
TAIR10	AT3G16150.1	2E-154	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	6484409	6486857	+
GWHAAZE00000004	mRNA	6484409	6486857	+
GWHAAZE00000004	exon	6484409	6484585	+
GWHAAZE00000004	exon	6485662	6485895	+
GWHAAZE00000004	exon	6486054	6486140	+
GWHAAZE00000004	exon	6486360	6486857	+
GWHAAZE00000004	CDS	6484409	6484585	+
GWHAAZE00000004	CDS	6485662	6485895	+
GWHAAZE00000004	CDS	6486054	6486140	+
GWHAAZE00000004	CDS	6486360	6486857	+

Transcript Sequence
>GWHTAAZE014149 ATGGGAAGGTGGGCAATAGCGGTGCACGGTGGCGCTGGTGTTGACCCAAACCTCCCGCCTGAACGACAAGATCAGGCCAAAAAACTCCTCACTCGATGTCTTAATCTCGGTGTTTCGGCTCTTCGTTCCTCCTCTTCCTCTTCCTCTTCCTCTGCCATTGACGTCGTTGAACTCATCGTTCGGGAATTGGAAACTGATCCCACATTTAATTCTGGGCGTGGATCAGCACTAACAGAGAAAGGAACGGCAGAGATGGAAGCTAGCATAATGGACGGGTCGGGCAGGAGATGCGGAGCAGTTTCGGGGGTCACCACAGTGAAAAACCCAGTCTCGCTTGCCCGACTTGTCATGGATAAATCCCCTCATTCTTATCTAGCCTTCTCCGGTGCTGAGGAATTCGCCAAACAGCAGGGTGTGGAAATGGTGGACAATGAATACTTCATCACCGAGGACAATAGGGGTATGCTGAAATTGGCCAAGGAAGCCAACACCATCATGTTTGATTACAGGATACCAATCACGGGAATGGAATCATGTGGCGCAGGGGTGGAGAGCCCAATACAGATGAATGGTCTCCCAATCAGTGTCTATGCCCCAGAGACTGTCGGATGCGTAGTGGTAGACAGCGAGGGCCGGTGCGCAGCGGCCACCTCAACTGGTGGCCTCATGAATAAGATGACTGGCCGCATCGGTGATTCACCCCTCATAGGAGCAGGGACCTATGCGTGTGAGCTCTGTGGGGTCTCCTGTACCGGTGAGGGGGAAGCAATCATACGCTCCACCCTGGCACGTGAGGTGGCGGCTGTGATGGAGTATAAGGAATTGGGGCTACAAGAGGCAGTGGACTTTGTGATAAAAGAAAGGCTGGATCAAGGGAAGGCTGGGCTCATAGCTGTGTCCAGTAAGGGGGAAGTGGCTTATGGGTTTAATAGTGTAGGCATGTTTAGGGGATGTGCCACAGAAGATGGGTTCATGGAAGTTGGTATCTGGGAGTAG

Network for GWHGAAZE014135

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01112.19	Asparaginase_2	4	330	3.60E-100

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13051	ASRGL1, iaaA	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Alanine, aspartate and glutamate metabolism	map00250
		Cyanoamino acid metabolism	map00460

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	107.452
	SRR3591706	second leaf	46.821
	SRR3591707	mature leaf	27.128
	SRR3591708	Shoot apex	114.488
	SRR3591709	Stem	268.129
	SRR3591710	White floral bud	98.972
	SRR3591711	White flower	600.462
	SRR3591712	Green floral bud	109.316
	SRR3591713	Yellow flower	887.874
SRP173429	SRR8316895	Juvenile bud stage	27.713
	SRR8316896	Juvenile bud stage	71.426
	SRR8316897	Juvenile bud stage	20.081
	SRR8316894	Third green stage	26.712
	SRR8316900	Third green stage	87.596
	SRR8316901	Third green stage	113.082
	SRR8316898	Complete white stage	16.542
	SRR8316899	Complete white stage	105.025
	SRR8316903	Complete white stage	23.628
	SRR8316902	Silver flowering stage	359.279
	SRR8316904	Silver flowering stage	291.557
	SRR8316905	Silver flowering stage	227.545
	SRR8316906	Gold flowering stage	1338.909
	SRR8316907	Gold flowering stage	1375.033
	SRR8316908	Gold flowering stage	902.157
SRP132670	SRR6706286	Control	185.702
	SRR6706287	Light intensity 50%	184.422
	SRR6706288	Light intensity 20%	168.289
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	57.617
	CNS0095593	Slightly white alabastrum(diploid) 2	75.365
	CNS0095594	Slightly white alabastrum(diploid) 3	90.645
	CNS0095595	Whole white alabastrum(diploid) 2	82.180
	CNS0095596	Whole white alabastrum(diploid) 3	68.646
	CNS0095597	Whole white alabastrum(diploid) 4	96.471
	CNS0095598	Silvery flower (diploied) 1	82.523
	CNS0095599	Silvery flower (diploied) 2	69.340
	CNS0095600	Silvery flower (diploied) 3	270.641
	CNS0095601	Golden flower (diploid) 1	362.278
	CNS0095602	Golden flower (diploid) 2	752.491
	CNS0095603	Golden flower (diploid) 3	750.430
	CNS0095604	Slightly white alabastrum(tetraploid) 1	101.828
	CNS0095605	Slightly white alabastrum(tetraploid) 2	94.670
	CNS0095606	Slightly white alabastrum(tetraploid) 3	82.864
	CNS0095607	Whole white alabastrum(tetraploid) 1	143.353
	CNS0095608	Whole white alabastrum(tetraploid) 2	149.514
	CNS0095609	Whole white alabastrum(tetraploid) 3	150.875
	CNS0095610	Silvery flower (diploied) 1	131.603
	CNS0095611	Silvery flower (diploied) 2	158.834
	CNS0095612	Silvery flower (diploied) 3	288.860
	CNS0095613	Golden flower (tetraploid) 1	223.943
	CNS0095614	Golden flower (tetraploid) 2	408.653
	CNS0095615	Golden flower (tetraploid) 3	1310.782
CRA001975	CRR073297	Stem 1	30.598
	CRR073298	Stem 2	48.069
	CRR073299	Stem 3	41.144
	CRR073300	Leaf 1	98.037
	CRR073301	Leaf 2	81.930
	CRR073302	Leaf 3	78.127
	CRR073303	Juvenile bud 1	61.781
	CRR073304	Juvenile bud 2	62.590
	CRR073305	Juvenile bud 3	83.095
	CRR073306	Third green 1	1861.062
	CRR073307	Third green 2	1334.757
	CRR073308	Third green 3	1156.464
	CRR073309	Second white 1	2201.182
	CRR073310	Second white 2	2128.884
	CRR073311	Second white 3	2063.877
	CRR073312	Silver flowering 1	2303.548
	CRR073313	Silver flowering 2	2574.020
	CRR073314	Silver flowering 3	1723.673
	CRR073315	Gold flowering 1	11.836
	CRR073316	Gold flowering 2	8.193
	CRR073317	Gold flowering 3	13.426
	CRR073318	Tawny withering 1	18.449
	CRR073319	Tawny withering 2	20.605
	CRR073320	Tawny withering 3	15.688