Detail information of GWHGAAZE015320


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG30732.13.10008E-66Transcription initiation factor TFIID subunit taf73 [Gossypium arboreum]
trEMBLtr|A0A061GLW7|A0A061GLW7_THECC9E-66Mitochondrial ATP synthase subunit G protein {ECO:0000313|EMBL:EOY30526.1}
TAIR10AT4G29480.12E-42Mitochondrial ATP synthase subunit G protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene3139227431395692-
GWHAAZE00000004mRNA3139227431395692-
GWHAAZE00000004exon3139227431392460-
GWHAAZE00000004exon3139534631395692-
GWHAAZE00000004CDS3139534631395692-
GWHAAZE00000004CDS3139227431392460-
Transcript Sequence

Network for GWHGAAZE015320

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0187GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) GOslim:cellular_component
GO:0015986 ATP synthesis coupled proton transport GOslim:biological_process
GO:0015078 proton transmembrane transporter activity GOslim:molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity GOslim:molecular_function
map00190 Oxidative phosphorylation
map04714 Thermogenesis


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04718.16ATP-synt_G181752.40E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02140ATPeFG, ATP5L, ATP20 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0015986biological_processATP synthesis coupled proton transport
GO:0000276cellular_componentmitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0015078molecular_functionproton transmembrane transporter activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf96.450
SRR3591706second leaf51.730
SRR3591707mature leaf31.229
SRR3591708Shoot apex88.972
SRR3591709Stem65.400
SRR3591710White floral bud62.741
SRR3591711White flower76.765
SRR3591712Green floral bud113.775
SRR3591713Yellow flower62.425
SRP173429 SRR8316895Juvenile bud stage 56.234
SRR8316896Juvenile bud stage 81.595
SRR8316897Juvenile bud stage 39.912
SRR8316894Third green stage 36.395
SRR8316900Third green stage 125.026
SRR8316901Third green stage 127.287
SRR8316898Complete white stage 37.828
SRR8316899Complete white stage 90.963
SRR8316903Complete white stage 48.069
SRR8316902Silver flowering stage48.070
SRR8316904Silver flowering stage40.995
SRR8316905Silver flowering stage21.975
SRR8316906Gold flowering stage 70.345
SRR8316907Gold flowering stage 98.904
SRR8316908Gold flowering stage 80.217
SRP132670SRR6706286Control130.493
SRR6706287Light intensity 50%133.316
SRR6706288Light intensity 20%127.959
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1108.053
CNS0095593Slightly white alabastrum(diploid) 2120.443
CNS0095594Slightly white alabastrum(diploid) 3115.494
CNS0095595Whole white alabastrum(diploid) 2114.176
CNS0095596Whole white alabastrum(diploid) 3134.382
CNS0095597Whole white alabastrum(diploid) 4100.114
CNS0095598Silvery flower (diploied) 152.733
CNS0095599Silvery flower (diploied) 256.652
CNS0095600Silvery flower (diploied) 368.680
CNS0095601Golden flower (diploid) 145.130
CNS0095602Golden flower (diploid) 250.211
CNS0095603Golden flower (diploid) 353.175
CNS0095604Slightly white alabastrum(tetraploid) 1124.295
CNS0095605Slightly white alabastrum(tetraploid) 2113.474
CNS0095606Slightly white alabastrum(tetraploid) 361.421
CNS0095607Whole white alabastrum(tetraploid) 1102.669
CNS0095608Whole white alabastrum(tetraploid) 281.765
CNS0095609Whole white alabastrum(tetraploid) 385.267
CNS0095610Silvery flower (diploied) 156.440
CNS0095611Silvery flower (diploied) 246.899
CNS0095612Silvery flower (diploied) 344.693
CNS0095613Golden flower (tetraploid) 135.511
CNS0095614Golden flower (tetraploid) 244.120
CNS0095615Golden flower (tetraploid) 321.119
CRA001975CRR073297Stem 155.430
CRR073298Stem 252.673
CRR073299Stem 364.548
CRR073300Leaf 160.266
CRR073301Leaf 266.087
CRR073302Leaf 375.909
CRR073303Juvenile bud 161.764
CRR073304Juvenile bud 258.116
CRR073305Juvenile bud 365.181
CRR073306Third green 147.964
CRR073307Third green 244.570
CRR073308Third green 336.166
CRR073309Second white 143.428
CRR073310Second white 232.847
CRR073311Second white 322.134
CRR073312Silver flowering 125.248
CRR073313Silver flowering 232.334
CRR073314Silver flowering 323.118
CRR073315Gold flowering 121.992
CRR073316Gold flowering 219.187
CRR073317Gold flowering 327.112
CRR073318Tawny withering 145.493
CRR073319Tawny withering 245.942
CRR073320Tawny withering 342.493