Gene detail

Detail information of GWHGAAZE015397

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AFO84084.1	0	hexokinase [Actinidia deliciosa]
Swissprot	tr\|P93834\|HXK2_ARATH	0	Hexokinase-2
trEMBL	tr\|S4SKB5\|S4SKB5_ACTDE	0	Hexokinase {ECO:0000313\|EMBL:AFO84084.1}
TAIR10	AT2G19860.1	6E-158	hexokinase 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	37626180	37636890	+
GWHAAZE00000004	mRNA	37626180	37636890	+
GWHAAZE00000004	exon	37626180	37626370	+
GWHAAZE00000004	exon	37630723	37630858	+
GWHAAZE00000004	exon	37631252	37631434	+
GWHAAZE00000004	exon	37632927	37633001	+
GWHAAZE00000004	exon	37633463	37633618	+
GWHAAZE00000004	exon	37634401	37634499	+
GWHAAZE00000004	exon	37634597	37634727	+
GWHAAZE00000004	exon	37636800	37636890	+
GWHAAZE00000004	CDS	37626180	37626370	+
GWHAAZE00000004	CDS	37630723	37630858	+
GWHAAZE00000004	CDS	37631252	37631434	+
GWHAAZE00000004	CDS	37632927	37633001	+
GWHAAZE00000004	CDS	37633463	37633618	+
GWHAAZE00000004	CDS	37634401	37634499	+
GWHAAZE00000004	CDS	37634597	37634727	+
GWHAAZE00000004	CDS	37636800	37636890	+

Transcript Sequence
>GWHTAAZE015413 ATGCGGAGCTCGGGGAGGTGGGCGAAGGCGATGGCGATACTGAGGGAGGTGGAAGAAAAGTGTGGGACCCCCATAGGGAAGCTGCGGCAGGTTGCGGATGCTATGCTGGTGGAGATGCACGCCGGCCTCGCCTCCGAAGGCGGCAGTAAACTCAAGATGCTCATCAGCTATGTCGATAACCTCCCCACCGGAGATGAGAAAGGATTATTTTATGCATTGGACCTGGGTGGCACAAACTTCCGTGTTTTGCGTGTACAATTGGGTGGGAAAGAAAAACGTGTTGTTAAACAAGAATTTGATGAAGTTTCAATTCCTCCACATTTGATGGCATTATTTGATTTTATTGCGACGGCACTTGCAAAATTTGTTGCTACGGAAGGTGAAGATACTCATCTTTTGAGTGGTAGACAAAGAGAGCTGGGATTCACTTTTTCCTTTCCAGTTAGGCAATCATCAATTGCATCTGGGAGTCTTATTAACTGGACGAAAGGCTTCTCTATAGAAGATGCGATTGGACAAGATGTTGTGGGGGAGTTGACCAAAGCGATGGAAAGAGTTGGCGTTGATATGCGAGTGTCTGCTTTGGTCAATGATACCATTGGAACATTAGCAAGAGGTAGATACAATAACCCAGACGTAATTGCTGCTGTTATATTGGGTACTGGAACAAATGCAGCATATATAGAGCGGGCACATGCAATACCTAAGTGGCATGGTCTGCTCCCAAAATCAGGAGAGATGGTTATCAACATTGAATGGGGTAACTTCCGGACATCACATCTTCCACTCACTGAATATGATACAGCTTTGGATGTTGAGAGTTTGAACCCAGGCGAGCAGATTTTTGAGAAGATTATTTCTGGCATGTATTTGGGTGAAATTGTACGCAGAGTCCTATGCAGTATGGCGGAGGAAGCTTCCTTTTTCGGTGATATTGTTCCTCCAAAACTGAAAATCCCATTCATATTAAGGCGTGTGTGGGCTCGCCTGCGCCTTGAAAGAAAAAGGCCTCAGCTTATTATGAACAGCGTTTTGTATGATAGGCTTATGCTTTTTGGTTGA

Network for GWHGAAZE015397

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00349.22	Hexokinase_1	14	208	1.80E-60
PF03727.17	Hexokinase_2	215	323	2.00E-39

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00844	HK	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Glycolysis / Gluconeogenesis	map00010
		Fructose and mannose metabolism	map00051
		Galactose metabolism	map00052
		Starch and sucrose metabolism	map00500
		Amino sugar and nucleotide sugar metabolism	map00520
		Streptomycin biosynthesis	map00521
		Neomycin, kanamycin and gentamicin biosynthesis	map00524
		HIF-1 signaling pathway	map04066
		Insulin signaling pathway	map04910
		Carbohydrate digestion and absorption	map04973

Gene Ontology

GO term	Ontology	Name
GO:0001678	biological_process	cellular glucose homeostasis
GO:0005975	biological_process	carbohydrate metabolic process
GO:0004396	molecular_function	hexokinase activity
GO:0005524	molecular_function	ATP binding
GO:0005536	molecular_function	glucose binding
GO:0016773	molecular_function	phosphotransferase activity, alcohol group as acceptor

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	10.889
	SRR3591706	second leaf	1.906
	SRR3591707	mature leaf	1.391
	SRR3591708	Shoot apex	6.395
	SRR3591709	Stem	6.074
	SRR3591710	White floral bud	75.103
	SRR3591711	White flower	17.387
	SRR3591712	Green floral bud	22.450
	SRR3591713	Yellow flower	8.974
SRP173429	SRR8316895	Juvenile bud stage	10.015
	SRR8316896	Juvenile bud stage	11.612
	SRR8316897	Juvenile bud stage	4.251
	SRR8316894	Third green stage	6.378
	SRR8316900	Third green stage	33.730
	SRR8316901	Third green stage	23.022
	SRR8316898	Complete white stage	54.022
	SRR8316899	Complete white stage	56.071
	SRR8316903	Complete white stage	81.102
	SRR8316902	Silver flowering stage	15.116
	SRR8316904	Silver flowering stage	19.127
	SRR8316905	Silver flowering stage	9.969
	SRR8316906	Gold flowering stage	20.664
	SRR8316907	Gold flowering stage	19.598
	SRR8316908	Gold flowering stage	26.986
SRP132670	SRR6706286	Control	23.144
	SRR6706287	Light intensity 50%	30.199
	SRR6706288	Light intensity 20%	25.540
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.424
	CNS0095593	Slightly white alabastrum(diploid) 2	11.439
	CNS0095594	Slightly white alabastrum(diploid) 3	7.868
	CNS0095595	Whole white alabastrum(diploid) 2	9.918
	CNS0095596	Whole white alabastrum(diploid) 3	10.220
	CNS0095597	Whole white alabastrum(diploid) 4	10.137
	CNS0095598	Silvery flower (diploied) 1	5.736
	CNS0095599	Silvery flower (diploied) 2	5.134
	CNS0095600	Silvery flower (diploied) 3	33.397
	CNS0095601	Golden flower (diploid) 1	4.540
	CNS0095602	Golden flower (diploid) 2	15.173
	CNS0095603	Golden flower (diploid) 3	14.541
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.060
	CNS0095605	Slightly white alabastrum(tetraploid) 2	6.321
	CNS0095606	Slightly white alabastrum(tetraploid) 3	20.547
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.309
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.034
	CNS0095609	Whole white alabastrum(tetraploid) 3	16.939
	CNS0095610	Silvery flower (diploied) 1	30.116
	CNS0095611	Silvery flower (diploied) 2	19.134
	CNS0095612	Silvery flower (diploied) 3	33.135
	CNS0095613	Golden flower (tetraploid) 1	8.512
	CNS0095614	Golden flower (tetraploid) 2	15.598
	CNS0095615	Golden flower (tetraploid) 3	11.459
CRA001975	CRR073297	Stem 1	12.386
	CRR073298	Stem 2	9.959
	CRR073299	Stem 3	11.056
	CRR073300	Leaf 1	21.384
	CRR073301	Leaf 2	15.005
	CRR073302	Leaf 3	14.861
	CRR073303	Juvenile bud 1	29.857
	CRR073304	Juvenile bud 2	34.066
	CRR073305	Juvenile bud 3	67.586
	CRR073306	Third green 1	49.207
	CRR073307	Third green 2	61.648
	CRR073308	Third green 3	51.311
	CRR073309	Second white 1	22.754
	CRR073310	Second white 2	14.925
	CRR073311	Second white 3	14.299
	CRR073312	Silver flowering 1	13.839
	CRR073313	Silver flowering 2	21.414
	CRR073314	Silver flowering 3	16.335
	CRR073315	Gold flowering 1	3.487
	CRR073316	Gold flowering 2	2.579
	CRR073317	Gold flowering 3	3.541
	CRR073318	Tawny withering 1	2.516
	CRR073319	Tawny withering 2	2.170
	CRR073320	Tawny withering 3	4.316