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Detail information of GWHGAAZE015736
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002285829.1
0
PREDICTED: MYST-like histone acetyltransferase 2 [Vitis vinifera]
Swissprot
tr|Q9FLF7|MYST1_ARATH
0
Probable MYST-like histone acetyltransferase 1
trEMBL
tr|F6H0N1|F6H0N1_VITVI
0
Histone acetyltransferase {ECO:0000256|RuleBase:RU361211}
TAIR10
AT5G64610.1
0
histone acetyltransferase of the MYST family 1
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000004
gene
55040754
55055551
-
GWHAAZE00000004
mRNA
55040754
55055551
-
GWHAAZE00000004
exon
55055260
55055551
-
GWHAAZE00000004
exon
55052728
55052816
-
GWHAAZE00000004
exon
55052568
55052627
-
GWHAAZE00000004
exon
55051575
55051784
-
GWHAAZE00000004
exon
55048374
55048442
-
GWHAAZE00000004
exon
55046970
55047131
-
GWHAAZE00000004
exon
55045994
55046087
-
GWHAAZE00000004
exon
55044550
55044692
-
GWHAAZE00000004
exon
55040754
55040957
-
GWHAAZE00000004
CDS
55055260
55055551
-
GWHAAZE00000004
CDS
55052728
55052816
-
GWHAAZE00000004
CDS
55052568
55052627
-
GWHAAZE00000004
CDS
55051575
55051784
-
GWHAAZE00000004
CDS
55048374
55048442
-
GWHAAZE00000004
CDS
55046970
55047131
-
GWHAAZE00000004
CDS
55045994
55046087
-
GWHAAZE00000004
CDS
55044550
55044692
-
GWHAAZE00000004
CDS
55040754
55040957
-
Transcript Sequence
>GWHTAAZE015752 ATGGGTTCCATAGACGCACCACAGACCAGTAAAGAAAACGTCTCCACCCCAACCACCCCCGACGGCCAGCTCCCCGCCGGCGGAGGTAAAGATTCCGGTGGGAATCAACCGGAAAATGATACCTACAGGAAGAGGAGATCATCAGGAGGAGGTATTTTATCCCTGGAGGTTGGAACTAGGGTTCTCTGCCGTTGGAGGGACGGAAAATATCACCCCGTCAAGGTCATCGAACGGCGTCGTGTCCACTCCGGCGGTCTTAACGACTACGAGTACTACGTTCACTACACCGAATTTAATAGGAGGCTTGATGAATGGGTTAAACTTGACCAACTTGATCTTAGTTCTGTGGAGACTGTTGTAGATGAAAAAGTGGAGGATAAGGTGACAAGCTTGAAAATGACGCGCCACCAGAAACGTAAGATTGATGAGACACATGTGGAGGGCCACGAGGAGCTTGATGCTGCCAGTTTGCGTGAACATGAAGAATTCACGAAAGTTAAGAATATAGCAACTATTGAACTTGGAAGATATGAGATTGAGACATGGTACTTTTCCCCCTTTCCACCAGAATACAATGACTCTCTGCAGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAATGTGATCTCAAGCATCCCCCTGGTGATGAGATATATCGAAGTGGCACTTTGTCAATGTTTGAGGTTGATGGCAAAAAGAATAAGGTTTATGGACAAAATCTTTGTTATCTGGCGAAGTTGTTTCTCGATCACAAGACACTGTACTATGATGTTGACTTGTTCCTATTTTATGTGTTGTGTGAATGTGATGATCGTGGATGCCACATGGTTGGCTATTTTTCCAAGGAAAAACATTCTGAAGAGTCCTATAATTTAGCTTGCATCCTCACTCTTCCTCCCTATCAGAGAAAAGGATATGGGAAATTCCTAATTGCATTTTCTTATGAACTCTCCAAGAAAGAAAGTAAAGTCGGCACCCCTGAGAGACCCCTTTCTGATTTAGGACTCTTGAGTTACAGAGGATACTGGACCCGTGTTCTTTTAGATATTCTGAAAAAGCACAAGGGCAACATCTCAATCAAGGAACTGAGCGATATGACTGCCATTAAGGCAGACGATATCCTGGCCACACTGCAGACATTGGAATTGATACAGTACCGCAAGGGTCAGCACGTGATTTGCGCAGACCCCAAGGTCTTGGATCGTCACTTGAAAGCTGCTGGCCGTGGTGGCCTTGATGTTGATGTCAGCAAATTGATATGGACTCCTTACAAAGAACAAGGTTGA
Network for GWHGAAZE015736
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF11717.9
Tudor-knot
55
113
3.70E-20
PF17772.2
zf-MYST
166
220
1.90E-24
PF01853.19
MOZ_SAS
225
402
6.30E-86
Protein Sequence
>GWHPAAZE015744 MGSIDAPQTSKENVSTPTTPDGQLPAGGGKDSGGNQPENDTYRKRRSSGGGILSLEVGTRVLCRWRDGKYHPVKVIERRRVHSGGLNDYEYYVHYTEFNRRLDEWVKLDQLDLSSVETVVDEKVEDKVTSLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDSLQLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKESKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKADDILATLQTLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQG
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
GO:0006355
biological_process
regulation of transcription, DNA-templated
GO:0016573
biological_process
histone acetylation
GO:0004402
molecular_function
histone acetyltransferase activity
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
27.748
SRR3591706
second leaf
24.472
SRR3591707
mature leaf
35.093
SRR3591708
Shoot apex
29.210
SRR3591709
Stem
36.190
SRR3591710
White floral bud
37.118
SRR3591711
White flower
38.960
SRR3591712
Green floral bud
25.953
SRR3591713
Yellow flower
44.608
SRP173429
SRR8316895
Juvenile bud stage
18.009
SRR8316896
Juvenile bud stage
23.009
SRR8316897
Juvenile bud stage
14.415
SRR8316894
Third green stage
9.013
SRR8316900
Third green stage
24.088
SRR8316901
Third green stage
23.890
SRR8316898
Complete white stage
12.027
SRR8316899
Complete white stage
40.191
SRR8316903
Complete white stage
21.742
SRR8316902
Silver flowering stage
17.300
SRR8316904
Silver flowering stage
21.378
SRR8316905
Silver flowering stage
10.186
SRR8316906
Gold flowering stage
34.679
SRR8316907
Gold flowering stage
30.295
SRR8316908
Gold flowering stage
39.615
SRP132670
SRR6706286
Control
23.030
SRR6706287
Light intensity 50%
22.699
SRR6706288
Light intensity 20%
23.793
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
13.478
CNS0095593
Slightly white alabastrum(diploid) 2
12.900
CNS0095594
Slightly white alabastrum(diploid) 3
12.701
CNS0095595
Whole white alabastrum(diploid) 2
13.190
CNS0095596
Whole white alabastrum(diploid) 3
10.615
CNS0095597
Whole white alabastrum(diploid) 4
12.882
CNS0095598
Silvery flower (diploied) 1
21.572
CNS0095599
Silvery flower (diploied) 2
21.186
CNS0095600
Silvery flower (diploied) 3
31.833
CNS0095601
Golden flower (diploid) 1
25.305
CNS0095602
Golden flower (diploid) 2
37.596
CNS0095603
Golden flower (diploid) 3
36.329
CNS0095604
Slightly white alabastrum(tetraploid) 1
26.506
CNS0095605
Slightly white alabastrum(tetraploid) 2
20.060
CNS0095606
Slightly white alabastrum(tetraploid) 3
46.473
CNS0095607
Whole white alabastrum(tetraploid) 1
20.425
CNS0095608
Whole white alabastrum(tetraploid) 2
16.830
CNS0095609
Whole white alabastrum(tetraploid) 3
31.445
CNS0095610
Silvery flower (diploied) 1
57.309
CNS0095611
Silvery flower (diploied) 2
59.272
CNS0095612
Silvery flower (diploied) 3
46.294
CNS0095613
Golden flower (tetraploid) 1
38.428
CNS0095614
Golden flower (tetraploid) 2
50.199
CNS0095615
Golden flower (tetraploid) 3
66.948
CRA001975
CRR073297
Stem 1
26.241
CRR073298
Stem 2
23.383
CRR073299
Stem 3
20.277
CRR073300
Leaf 1
22.891
CRR073301
Leaf 2
21.183
CRR073302
Leaf 3
20.808
CRR073303
Juvenile bud 1
18.272
CRR073304
Juvenile bud 2
17.250
CRR073305
Juvenile bud 3
19.276
CRR073306
Third green 1
14.003
CRR073307
Third green 2
13.350
CRR073308
Third green 3
16.006
CRR073309
Second white 1
16.502
CRR073310
Second white 2
24.653
CRR073311
Second white 3
17.576
CRR073312
Silver flowering 1
19.122
CRR073313
Silver flowering 2
17.098
CRR073314
Silver flowering 3
16.396
CRR073315
Gold flowering 1
32.232
CRR073316
Gold flowering 2
36.253
CRR073317
Gold flowering 3
31.405
CRR073318
Tawny withering 1
22.502
CRR073319
Tawny withering 2
20.335
CRR073320
Tawny withering 3
22.301