Gene detail

Detail information of GWHGAAZE016146

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU36723.1	0	hypothetical protein MIMGU_mgv1a005421mg [Erythranthe guttata]
Swissprot	tr\|Q84WW6\|ASHH1_ARATH	6E-154	Histone-lysine N-methyltransferase ASHH1
trEMBL	tr\|A0A022RAF5\|A0A022RAF5_ERYGU	0	Uncharacterized protein {ECO:0000313\|EMBL:EYU36723.1}
TAIR10	AT1G76710.2	2E-126	SET domain group 26

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	70258261	70265297	+
GWHAAZE00000004	mRNA	70258261	70265297	+
GWHAAZE00000004	exon	70258261	70258344	+
GWHAAZE00000004	exon	70259717	70259803	+
GWHAAZE00000004	exon	70261152	70261236	+
GWHAAZE00000004	exon	70261321	70261414	+
GWHAAZE00000004	exon	70261965	70262163	+
GWHAAZE00000004	exon	70262663	70262697	+
GWHAAZE00000004	exon	70264087	70264519	+
GWHAAZE00000004	exon	70265046	70265297	+
GWHAAZE00000004	CDS	70258261	70258344	+
GWHAAZE00000004	CDS	70259717	70259803	+
GWHAAZE00000004	CDS	70261152	70261236	+
GWHAAZE00000004	CDS	70261321	70261414	+
GWHAAZE00000004	CDS	70261965	70262163	+
GWHAAZE00000004	CDS	70262663	70262697	+
GWHAAZE00000004	CDS	70264087	70264519	+
GWHAAZE00000004	CDS	70265046	70265297	+

Transcript Sequence
>GWHTAAZE016166 ATGTGGGAGAGGTGCTTGAACTTGCTGACCAGCACGGAATGCACTCCAGGCTACTGCCCTTGTGGTGAAAAGTGCAAAAATCAGAGATTCCAGAAATGTGAATATGCTAAAACAAAGTTGTTCAAAACCGAGGGCCGTGGGTGGGGACTTTTGGCTGATGAGAATATTAAGGCTGGACAGTTCATTATTGAATATTGCGGAGAAGTAATAACATCAAACGAAGCGGACCGGAGGTCGCAAACTTATGAAGTTCAAGGCCTTAGGGATGCATATATAATCTCTCTTGATGCCAATTATTTTATTGATGCCACCAAAAAGGGTAGTCTTGCTCGATTTATCAACCATTCATGCCAACCAAATTGTGAGACAAGGAAATGGACAGTTTTAGGGGAAACAAGGGTCGGGATTTTTGCGAAGCAAGATATCTCCGTTGGCACTGAATTGGCATATGACTATAATTTTGAATGGTATGGTGGCGCTAATGTGCGCTGTCTGTGTGGGGCTTCCAACTGTTCTATATTTCTTGGTGGAAAGTCTCAAGGTTTCCAGGAGCATAACCATGTATGGGAGGACGATGATGACAGATATACTGTTACAGAAATTCCAATCTATGATTCTGCTGAGGATGATGGGCCTTGGTCAAAGCTCCTCGAAACTACAAGCTCCCCTAAACTTGAATTCTCGGCCATTGGTGATAATGATTTCTCTGTGATGGACAATGGTGGTGTGGGACCTGAATATCCAATGGGATCCACAAATAATCCTACTGTCGAGCCTGTGAATACTGTGAAAACTGTGAGTTTTGTTACCGAATCTTTTCCACAAACAAATGCAACAATGAGTAATAGTGCTCTTGGGGATTTTAACGTTGGCCTGGACCCCGCATCGAAGAAAAGATCGGGCCAACACATACCAATCAGACGGTCAAAAAAACCTGGTCGAAAGCAAGTAAATGGAAAGCATGCTGCTCGACTATTTGCATCAAAGGAAGCGCAAGAAGAAATCTTGAAATATGAGGAAATAAGAAGCGAAGCTGATGCCAAGCTGGACGCAGTTTATGATGAAATACGTCCAGCCATTGAAGAAAGGGAGAGGGACAACCAGGACAGCGTACCTACCGTCTTAGCAGAGAAGTGGATTGAAGCCACATGCCTTCAAATGAAAGCTAATTTTGACCTAAATTTCTCCATTGTCAAGAATGCTTTGTGCCCCAAACCCAAGAGCTCAACTGGTGAAGAAACAAATCCTTCACATGGACAAGGCAATTAG

Network for GWHGAAZE016146

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0244	Transcription factor SET family Transcription factor SET GO:0048037 cofactor binding GOslim:molecular_function GO:0018024 histone-lysine N-methyltransferase activity GOslim:molecular_function
CFinderModule0267	Transcription factor SET family Transcription factor SET Transcription factor C3H family Transcription factor C3H Transcription factor C2H2 family Transcription factor C2H2 GO:0018024 histone-lysine N-methyltransferase activity GOslim:molecular_function GO:0005634 nucleus GOslim:cellular_component

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF17907.2	AWS	3	33	6.50E-12
PF00856.29	SET	47	153	1.20E-23

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	SET

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005634	cellular_component	nucleus
GO:0005515	molecular_function	protein binding
GO:0018024	molecular_function	histone-lysine N-methyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	13.373
	SRR3591706	second leaf	18.583
	SRR3591707	mature leaf	16.354
	SRR3591708	Shoot apex	21.028
	SRR3591709	Stem	19.030
	SRR3591710	White floral bud	18.139
	SRR3591711	White flower	19.168
	SRR3591712	Green floral bud	17.155
	SRR3591713	Yellow flower	17.399
SRP173429	SRR8316895	Juvenile bud stage	18.665
	SRR8316896	Juvenile bud stage	29.062
	SRR8316897	Juvenile bud stage	12.702
	SRR8316894	Third green stage	10.571
	SRR8316900	Third green stage	27.054
	SRR8316901	Third green stage	25.063
	SRR8316898	Complete white stage	9.884
	SRR8316899	Complete white stage	34.916
	SRR8316903	Complete white stage	19.130
	SRR8316902	Silver flowering stage	11.456
	SRR8316904	Silver flowering stage	14.118
	SRR8316905	Silver flowering stage	6.310
	SRR8316906	Gold flowering stage	28.863
	SRR8316907	Gold flowering stage	26.632
	SRR8316908	Gold flowering stage	25.660
SRP132670	SRR6706286	Control	23.002
	SRR6706287	Light intensity 50%	24.262
	SRR6706288	Light intensity 20%	25.602
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	25.042
	CNS0095593	Slightly white alabastrum(diploid) 2	23.664
	CNS0095594	Slightly white alabastrum(diploid) 3	28.546
	CNS0095595	Whole white alabastrum(diploid) 2	23.943
	CNS0095596	Whole white alabastrum(diploid) 3	23.881
	CNS0095597	Whole white alabastrum(diploid) 4	16.263
	CNS0095598	Silvery flower (diploied) 1	27.719
	CNS0095599	Silvery flower (diploied) 2	19.513
	CNS0095600	Silvery flower (diploied) 3	19.429
	CNS0095601	Golden flower (diploid) 1	25.120
	CNS0095602	Golden flower (diploid) 2	18.537
	CNS0095603	Golden flower (diploid) 3	17.910
	CNS0095604	Slightly white alabastrum(tetraploid) 1	29.022
	CNS0095605	Slightly white alabastrum(tetraploid) 2	26.778
	CNS0095606	Slightly white alabastrum(tetraploid) 3	32.841
	CNS0095607	Whole white alabastrum(tetraploid) 1	18.441
	CNS0095608	Whole white alabastrum(tetraploid) 2	15.518
	CNS0095609	Whole white alabastrum(tetraploid) 3	24.145
	CNS0095610	Silvery flower (diploied) 1	26.761
	CNS0095611	Silvery flower (diploied) 2	22.403
	CNS0095612	Silvery flower (diploied) 3	30.591
	CNS0095613	Golden flower (tetraploid) 1	21.502
	CNS0095614	Golden flower (tetraploid) 2	23.665
	CNS0095615	Golden flower (tetraploid) 3	17.451
CRA001975	CRR073297	Stem 1	23.087
	CRR073298	Stem 2	20.813
	CRR073299	Stem 3	15.183
	CRR073300	Leaf 1	26.315
	CRR073301	Leaf 2	23.217
	CRR073302	Leaf 3	13.664
	CRR073303	Juvenile bud 1	13.496
	CRR073304	Juvenile bud 2	10.235
	CRR073305	Juvenile bud 3	15.321
	CRR073306	Third green 1	9.957
	CRR073307	Third green 2	5.089
	CRR073308	Third green 3	8.784
	CRR073309	Second white 1	6.659
	CRR073310	Second white 2	11.581
	CRR073311	Second white 3	10.648
	CRR073312	Silver flowering 1	5.793
	CRR073313	Silver flowering 2	2.810
	CRR073314	Silver flowering 3	9.305
	CRR073315	Gold flowering 1	9.358
	CRR073316	Gold flowering 2	13.607
	CRR073317	Gold flowering 3	4.318
	CRR073318	Tawny withering 1	14.789
	CRR073319	Tawny withering 2	17.327
	CRR073320	Tawny withering 3	15.689