Gene detail

Detail information of GWHGAAZE016596

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002278300.1	0	PREDICTED: cytochrome P450 71A1 [Vitis vinifera]
Swissprot	tr\|O65782\|C83B1_ARATH	6E-143	Cytochrome P450 83B1
trEMBL	tr\|F6H064\|F6H064_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB46012.1}
TAIR10	AT4G31500.1	1E-107	cytochrome P450, family 83, subfamily B, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	79337877	79339459	-
GWHAAZE00000004	mRNA	79337877	79339459	-
GWHAAZE00000004	exon	79337877	79338482	-
GWHAAZE00000004	exon	79338576	79339164	-
GWHAAZE00000004	exon	79339263	79339459	-
GWHAAZE00000004	CDS	79339263	79339459	-
GWHAAZE00000004	CDS	79338576	79339164	-
GWHAAZE00000004	CDS	79337877	79338482	-

Transcript Sequence
>GWHTAAZE016616 ATGGAGATAACACTTCTTCTCCTTCTAGCTCTCCCTATATTCTTCCTTTTTCTTATATCTCGTGCAACGAGAAATAGGGGAAGACTCCTTCCGCAGGGTCCTCGAGGACTTCCCTTCATTGGAAACTTGCACCAACTCGACAATTCGTTCCTTCAACATCAGTTATGGAAACTCTCTGAAGAATACGGTCCCCTTATGCCAGCTATGCTTGGCCAGCAAAAATTGTCTTACAATGGCTTAGATCTGGCCTTGTCACCGTATAATGATTATTGGAGGGAGATGAAAAAGATTGTCATGCTTCATTTGTTTAGTTCTAAAAGAGTGCAATCATTTCGCCCTATTCGAGAAGATGAAGTTGACCGAATGATCAAGAAAGTATCTGAACTCGCAGCTTCATTTAAACTCGCCAATTTGAGTGAAATAATTATTTCTCTCACGGTCATAATAATATGTAGAGTTGCTTTCAGTAAGCGGTTTGACGAAGGTTATGAAGGGAGTAGATTTCATAGGCTTGTTACGGAATGCCAAGCCGTGATGGTTTGCTTTTATTTTTCGGATCATTTACCAATGTTGGGGTGGCTTGATAGGCTTAGGGGACTTCGTTCTCGATTAGAAAAGATCTTCAAGGAAATGGATTTATTCTACCAAGAACTTATTGAAGAGCACGTTGATCCAGAGAGACAAAATTATGCGCGGGAGGATATTATTGACATCTTTCTACAATTGAAAAAGGACCAATCATCTTCAATTGATCTCACTTTTGGTCACATCAAAGCTATGCTCTTGGATATATTGACCGGGGGTTCAGAGACAAGCGCATCAACTGTGATATTTGCCATGACGGAGCTAATGAAAAACCCTACAGTAATGGAGAAAGCACAAGAAGAAGTAAGAAAATTGATCGGAAAGAAGGGTAGAGTAGACGAAGATGATTTGCAAAATCTTCCTTATCTTGGGATTGTCGTGAAAGAGACCTTGAGATTGCACCCTCCAGTTCCCCTTCTATTACCACGAGAAGCAATGCAAAGCTGTGTTTTAGATGGTTTTGAAATCCAACCAAAGACGGTGGTTTACGTTAACACTTATGCGATTGGGAGAGATCCAGATTGTTGGAAAGACCCTTTAAAGTTCTTCCCAGAGAGATTTTTGGGTACTACTATTGACTATAAAGGCCATGATTTCGAACTAATTCCCTTCGGGGCAGGGCGAAGAAGTTGTCCTGGGATAGTCATGGGATCTACAATGGTGGAACTTATACTTTCTAATCTCCTTTACTCTTTTGACTGGGAATTGCCTGTGGGGATGCAAAAGGAAGACCTGGATACTATTCCTATGCCCGGTATGATAGTGCATAAGAAAACCCCTCTTTGCCTTGTACCTAAGAAGACATAA

Network for GWHGAAZE016596

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	73	447	1.00E-84

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.110
	SRR3591707	mature leaf	0.566
	SRR3591708	Shoot apex	0.179
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	1.981
	SRR3591711	White flower	0.367
	SRR3591712	Green floral bud	3.380
	SRR3591713	Yellow flower	2.623
SRP173429	SRR8316895	Juvenile bud stage	0.432
	SRR8316896	Juvenile bud stage	1.161
	SRR8316897	Juvenile bud stage	1.528
	SRR8316894	Third green stage	0.414
	SRR8316900	Third green stage	1.352
	SRR8316901	Third green stage	1.990
	SRR8316898	Complete white stage	0.192
	SRR8316899	Complete white stage	0.769
	SRR8316903	Complete white stage	0.060
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.079
	SRR8316905	Silver flowering stage	0.031
	SRR8316906	Gold flowering stage	0.194
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.663
	SRR6706287	Light intensity 50%	0.366
	SRR6706288	Light intensity 20%	0.495
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.465
	CNS0095593	Slightly white alabastrum(diploid) 2	0.441
	CNS0095594	Slightly white alabastrum(diploid) 3	4.414
	CNS0095595	Whole white alabastrum(diploid) 2	1.491
	CNS0095596	Whole white alabastrum(diploid) 3	2.370
	CNS0095597	Whole white alabastrum(diploid) 4	3.656
	CNS0095598	Silvery flower (diploied) 1	0.499
	CNS0095599	Silvery flower (diploied) 2	0.090
	CNS0095600	Silvery flower (diploied) 3	0.075
	CNS0095601	Golden flower (diploid) 1	0.302
	CNS0095602	Golden flower (diploid) 2	1.867
	CNS0095603	Golden flower (diploid) 3	1.773
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.360
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.187
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.038
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.797
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.356
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.112
	CNS0095610	Silvery flower (diploied) 1	0.106
	CNS0095611	Silvery flower (diploied) 2	0.144
	CNS0095612	Silvery flower (diploied) 3	0.183
	CNS0095613	Golden flower (tetraploid) 1	6.538
	CNS0095614	Golden flower (tetraploid) 2	0.513
	CNS0095615	Golden flower (tetraploid) 3	21.804
CRA001975	CRR073297	Stem 1	0.101
	CRR073298	Stem 2	0.190
	CRR073299	Stem 3	0.030
	CRR073300	Leaf 1	0.066
	CRR073301	Leaf 2	0.060
	CRR073302	Leaf 3	0.161
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.224
	CRR073313	Silver flowering 2	0.181
	CRR073314	Silver flowering 3	0.222
	CRR073315	Gold flowering 1	1.588
	CRR073316	Gold flowering 2	0.337
	CRR073317	Gold flowering 3	1.079
	CRR073318	Tawny withering 1	0.569
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.162