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Detail information of GWHGAAZE016797
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002520589.1
2.11163E-63
Protein C9orf41, putative [Ricinus communis]
trEMBL
tr|B9S3M0|B9S3M0_RICCO
8E-64
Protein C9orf41, putative {ECO:0000313|EMBL:EEF41822.1}
TAIR10
AT2G32170.1
1E-52
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000004
gene
83075382
83077532
-
GWHAAZE00000004
mRNA
83075382
83077532
-
GWHAAZE00000004
exon
83075382
83075406
-
GWHAAZE00000004
exon
83076036
83076149
-
GWHAAZE00000004
exon
83076260
83076326
-
GWHAAZE00000004
exon
83076734
83076798
-
GWHAAZE00000004
exon
83077441
83077532
-
GWHAAZE00000004
CDS
83077441
83077532
-
GWHAAZE00000004
CDS
83076734
83076798
-
GWHAAZE00000004
CDS
83076260
83076326
-
GWHAAZE00000004
CDS
83076036
83076149
-
GWHAAZE00000004
CDS
83075382
83075406
-
Transcript Sequence
>GWHTAAZE016817 ATGAAAATACAGGGACAGAAGGAACGAGATCAGTGCTATAAGCCTATCCTTTTAGAGCTCGAACGCCAATTCCCTGATCGCTGTAAAGAGAGTCCTCCTTCTTGTTTAGTTCCTGGTGCTGGACTTGGACGGCTAGCGCTGGAAATTTCATGTTTAGGTTTTATAAGCCAAGGAAATGAATTTTCATACTACATGATGATATGCTCAAGTTTCATTCTTAACCAGTCTGAGACTGCAGAGGAGTGGACTATACATCCTTGGATTCACAGCAATTGTAATTCACTTTCAGACAATGACCAGCTTCGTCCTGTTTCAATTCCAGATATTCATCCAGCTAGGACAGCAATATGCGGTCGGCAGTGA
Network for GWHGAAZE016797
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF07942.13
N2227
4
113
2.30E-43
Protein Sequence
>GWHPAAZE016807 MKIQGQKERDQCYKPILLELERQFPDRCKESPPSCLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILNQSETAEEWTIHPWIHSNCNSLSDNDQLRPVSIPDIHPARTAICGRQ
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K19787
CARNMT1
Metabolic pathways
map01100
Histidine metabolism
map00340
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
20.528
SRR3591706
second leaf
10.711
SRR3591707
mature leaf
10.928
SRR3591708
Shoot apex
20.364
SRR3591709
Stem
15.953
SRR3591710
White floral bud
13.045
SRR3591711
White flower
11.100
SRR3591712
Green floral bud
11.615
SRR3591713
Yellow flower
7.913
SRP173429
SRR8316895
Juvenile bud stage
14.995
SRR8316896
Juvenile bud stage
14.812
SRR8316897
Juvenile bud stage
8.536
SRR8316894
Third green stage
5.121
SRR8316900
Third green stage
16.475
SRR8316901
Third green stage
11.614
SRR8316898
Complete white stage
6.719
SRR8316899
Complete white stage
21.296
SRR8316903
Complete white stage
9.336
SRR8316902
Silver flowering stage
6.751
SRR8316904
Silver flowering stage
8.334
SRR8316905
Silver flowering stage
4.070
SRR8316906
Gold flowering stage
12.866
SRR8316907
Gold flowering stage
8.624
SRR8316908
Gold flowering stage
10.329
SRP132670
SRR6706286
Control
7.283
SRR6706287
Light intensity 50%
6.029
SRR6706288
Light intensity 20%
6.752
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
11.805
CNS0095593
Slightly white alabastrum(diploid) 2
17.904
CNS0095594
Slightly white alabastrum(diploid) 3
11.767
CNS0095595
Whole white alabastrum(diploid) 2
13.028
CNS0095596
Whole white alabastrum(diploid) 3
11.423
CNS0095597
Whole white alabastrum(diploid) 4
8.292
CNS0095598
Silvery flower (diploied) 1
14.962
CNS0095599
Silvery flower (diploied) 2
9.861
CNS0095600
Silvery flower (diploied) 3
13.028
CNS0095601
Golden flower (diploid) 1
10.774
CNS0095602
Golden flower (diploid) 2
13.496
CNS0095603
Golden flower (diploid) 3
13.772
CNS0095604
Slightly white alabastrum(tetraploid) 1
14.601
CNS0095605
Slightly white alabastrum(tetraploid) 2
12.899
CNS0095606
Slightly white alabastrum(tetraploid) 3
16.712
CNS0095607
Whole white alabastrum(tetraploid) 1
9.995
CNS0095608
Whole white alabastrum(tetraploid) 2
8.060
CNS0095609
Whole white alabastrum(tetraploid) 3
13.052
CNS0095610
Silvery flower (diploied) 1
16.094
CNS0095611
Silvery flower (diploied) 2
11.942
CNS0095612
Silvery flower (diploied) 3
17.661
CNS0095613
Golden flower (tetraploid) 1
8.482
CNS0095614
Golden flower (tetraploid) 2
8.818
CNS0095615
Golden flower (tetraploid) 3
9.437
CRA001975
CRR073297
Stem 1
12.659
CRR073298
Stem 2
12.137
CRR073299
Stem 3
8.995
CRR073300
Leaf 1
11.342
CRR073301
Leaf 2
9.197
CRR073302
Leaf 3
9.398
CRR073303
Juvenile bud 1
9.617
CRR073304
Juvenile bud 2
5.614
CRR073305
Juvenile bud 3
9.607
CRR073306
Third green 1
2.459
CRR073307
Third green 2
5.106
CRR073308
Third green 3
2.855
CRR073309
Second white 1
4.458
CRR073310
Second white 2
3.291
CRR073311
Second white 3
3.346
CRR073312
Silver flowering 1
3.034
CRR073313
Silver flowering 2
1.335
CRR073314
Silver flowering 3
2.253
CRR073315
Gold flowering 1
5.497
CRR073316
Gold flowering 2
17.940
CRR073317
Gold flowering 3
4.877
CRR073318
Tawny withering 1
10.275
CRR073319
Tawny withering 2
11.440
CRR073320
Tawny withering 3
10.380