Gene detail

Detail information of GWHGAAZE016823

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP39401.1	4.5875E-149	hypothetical protein JCGZ_03683 [Jatropha curcas]
Swissprot	tr\|Q42546\|DPNP1_ARATH	3E-138	SAL1 phosphatase
trEMBL	tr\|A0A067KT55\|A0A067KT55_JATCU	2E-149	Uncharacterized protein {ECO:0000313\|EMBL:KDP39401.1}
TAIR10	AT5G63980.1	3E-98	Inositol monophosphatase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	83583748	83589719	-
GWHAAZE00000004	mRNA	83583748	83589719	-
GWHAAZE00000004	exon	83583748	83583917	-
GWHAAZE00000004	exon	83585654	83585756	-
GWHAAZE00000004	exon	83586473	83586571	-
GWHAAZE00000004	exon	83586665	83586875	-
GWHAAZE00000004	exon	83589086	83589291	-
GWHAAZE00000004	exon	83589633	83589719	-
GWHAAZE00000004	CDS	83589633	83589719	-
GWHAAZE00000004	CDS	83589086	83589291	-
GWHAAZE00000004	CDS	83586665	83586875	-
GWHAAZE00000004	CDS	83586473	83586571	-
GWHAAZE00000004	CDS	83585654	83585756	-
GWHAAZE00000004	CDS	83583748	83583917	-

Transcript Sequence
>GWHTAAZE016843 ATGTGTCCCACAGGCTCACAGGTTCTGGTCAGTTTTGTTTTGCAGAAAGAACTTCCCGTCAACACGTTCTCACTAGTGGCCGAGGAGGATTCGGGTGATCTTTGCAAGGAAGAAGGCCAAGAAACACTACAACGCATCACGAAGCTTGTGAATGATATTATTGCTAGCGATGGAACATATGGTGTTTCTCCTTTATCTAAAGAAGACGTAATTTCTGCCATTGACAGTGGCAAATCTGAAGGAGGTCCTCATGGTCAGCATTGGGTTTTAGATCCCATTGATGGTACTAAAGGGTTTCTAAGAGGGGACCAATATGCCATAGCATTAGGACTGCTAGATGAAGGGAAAGTGGTGTTGGGTGTCCTTGGCTGTCCAAATCTCCCCTTAGCATCCATTGCTAATAATGATGCTCCTCTTGACAAAGTTGGTTGTCTTTTTGCTGCCCAAGTTGGTTGCGGAACCTACATGCATTCTCTAGATGATGATGACTCCTCAGCCTCAAAGGTGCATGTTAGCACAACCGAAAATCCTGAAGAAGCTTCTTTCTTTGAATCATTTGAAGCAGCGCATTCCTTGCACAGCTTATCCAGCTCTATAGCAAAGAAACTGGGTGTGAAAGCGCCACCTGTTAGAATCGATAGCCAGGCAAAATATGGCGCCCTGTCTAGAGGAGATGGGGCAATATATCTGCGTTCCCTCACAAAGGAAGCAGGAGGTGTAGTGACAGATGCAGGTGGAAAGCCATTGGACTTCTCAAAGGGGAGATATCTTGATCTTGACACTGGCATTATTGTTACCAACCAAAAGTTGATGCCTTCTCTCTTGAAGGCTGTTAGGCAGTGTTTGGATGACATAGATTCCTCCTCCTCCTTGTGA

Network for GWHGAAZE016823

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00459.26	Inositol_P	7	281	6.90E-40

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15422	SAL	Metabolic pathways	map01100
		Microbial metabolism in diverse environments	map01120
		Inositol phosphate metabolism	map00562
		Sulfur metabolism	map00920
		Phosphatidylinositol signaling system	map04070

Gene Ontology

GO term	Ontology	Name
GO:0006790	biological_process	sulfur compound metabolic process
GO:0046854	biological_process	phosphatidylinositol phosphorylation
GO:0008441	molecular_function	3'(2'),5'-bisphosphate nucleotidase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	45.272
	SRR3591706	second leaf	36.566
	SRR3591707	mature leaf	15.552
	SRR3591708	Shoot apex	47.141
	SRR3591709	Stem	25.562
	SRR3591710	White floral bud	17.732
	SRR3591711	White flower	18.745
	SRR3591712	Green floral bud	38.196
	SRR3591713	Yellow flower	16.388
SRP173429	SRR8316895	Juvenile bud stage	28.125
	SRR8316896	Juvenile bud stage	40.205
	SRR8316897	Juvenile bud stage	20.787
	SRR8316894	Third green stage	16.531
	SRR8316900	Third green stage	58.757
	SRR8316901	Third green stage	46.304
	SRR8316898	Complete white stage	11.431
	SRR8316899	Complete white stage	45.423
	SRR8316903	Complete white stage	17.015
	SRR8316902	Silver flowering stage	10.069
	SRR8316904	Silver flowering stage	11.057
	SRR8316905	Silver flowering stage	6.350
	SRR8316906	Gold flowering stage	20.662
	SRR8316907	Gold flowering stage	15.800
	SRR8316908	Gold flowering stage	24.979
SRP132670	SRR6706286	Control	46.028
	SRR6706287	Light intensity 50%	48.529
	SRR6706288	Light intensity 20%	55.740
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	41.016
	CNS0095593	Slightly white alabastrum(diploid) 2	37.401
	CNS0095594	Slightly white alabastrum(diploid) 3	42.642
	CNS0095595	Whole white alabastrum(diploid) 2	33.318
	CNS0095596	Whole white alabastrum(diploid) 3	35.726
	CNS0095597	Whole white alabastrum(diploid) 4	28.035
	CNS0095598	Silvery flower (diploied) 1	20.735
	CNS0095599	Silvery flower (diploied) 2	16.106
	CNS0095600	Silvery flower (diploied) 3	21.769
	CNS0095601	Golden flower (diploid) 1	16.435
	CNS0095602	Golden flower (diploid) 2	17.283
	CNS0095603	Golden flower (diploid) 3	18.175
	CNS0095604	Slightly white alabastrum(tetraploid) 1	36.877
	CNS0095605	Slightly white alabastrum(tetraploid) 2	29.197
	CNS0095606	Slightly white alabastrum(tetraploid) 3	42.215
	CNS0095607	Whole white alabastrum(tetraploid) 1	19.398
	CNS0095608	Whole white alabastrum(tetraploid) 2	18.997
	CNS0095609	Whole white alabastrum(tetraploid) 3	27.930
	CNS0095610	Silvery flower (diploied) 1	9.404
	CNS0095611	Silvery flower (diploied) 2	9.925
	CNS0095612	Silvery flower (diploied) 3	7.296
	CNS0095613	Golden flower (tetraploid) 1	3.176
	CNS0095614	Golden flower (tetraploid) 2	6.353
	CNS0095615	Golden flower (tetraploid) 3	2.511
CRA001975	CRR073297	Stem 1	45.775
	CRR073298	Stem 2	45.209
	CRR073299	Stem 3	42.989
	CRR073300	Leaf 1	42.699
	CRR073301	Leaf 2	49.806
	CRR073302	Leaf 3	60.944
	CRR073303	Juvenile bud 1	43.790
	CRR073304	Juvenile bud 2	45.069
	CRR073305	Juvenile bud 3	47.049
	CRR073306	Third green 1	18.732
	CRR073307	Third green 2	12.304
	CRR073308	Third green 3	13.059
	CRR073309	Second white 1	15.071
	CRR073310	Second white 2	9.896
	CRR073311	Second white 3	7.242
	CRR073312	Silver flowering 1	6.434
	CRR073313	Silver flowering 2	5.747
	CRR073314	Silver flowering 3	3.242
	CRR073315	Gold flowering 1	40.986
	CRR073316	Gold flowering 2	38.556
	CRR073317	Gold flowering 3	35.975
	CRR073318	Tawny withering 1	37.658
	CRR073319	Tawny withering 2	31.400
	CRR073320	Tawny withering 3	42.738