Detail information of GWHGAAZE017066


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP33886.10hypothetical protein JCGZ_07457 [Jatropha curcas]
Swissprottr|Q8GZ92|BRXL4_ARATH2E-148Protein Brevis radix-like 4
trEMBLtr|A0A067KCD9|A0A067KCD9_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP33886.1}
TAIR10AT5G20540.19E-119BREVIS RADIX-like 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene9090979490915454-
GWHAAZE00000004mRNA9090979490915454-
GWHAAZE00000004exon9091533290915454-
GWHAAZE00000004exon9091399090914360-
GWHAAZE00000004exon9091099690911131-
GWHAAZE00000004exon9091004490910444-
GWHAAZE00000004exon9090979490909872-
GWHAAZE00000004CDS9091533290915454-
GWHAAZE00000004CDS9091399090914360-
GWHAAZE00000004CDS9091099690911131-
GWHAAZE00000004CDS9091004490910444-
GWHAAZE00000004CDS9090979490909872-
Transcript Sequence

Network for GWHGAAZE017066

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0096GO:0070588 calcium ion transmembrane transport GOslim:biological_process
GO:0005388 calcium transmembrane transporter activity, phosphorylative mechanism GOslim:molecular_function
GO:0000166 nucleotide binding GOslim:molecular_function


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13713.7BRX_N25513.00E-10
PF08381.12BRX1351894.40E-26
PF08381.12BRX3133683.60E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.681
SRR3591706second leaf0.507
SRR3591707mature leaf0.476
SRR3591708Shoot apex1.180
SRR3591709Stem9.263
SRR3591710White floral bud0.939
SRR3591711White flower6.111
SRR3591712Green floral bud0.554
SRR3591713Yellow flower1.007
SRP173429 SRR8316895Juvenile bud stage 0.115
SRR8316896Juvenile bud stage 0.020
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.129
SRR8316900Third green stage 0.261
SRR8316901Third green stage 0.077
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.126
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.184
SRR8316904Silver flowering stage0.516
SRR8316905Silver flowering stage0.077
SRR8316906Gold flowering stage 0.136
SRR8316907Gold flowering stage 0.208
SRR8316908Gold flowering stage 0.535
SRP132670SRR6706286Control0.048
SRR6706287Light intensity 50%0.123
SRR6706288Light intensity 20%0.056
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.204
CNS0095593Slightly white alabastrum(diploid) 20.134
CNS0095594Slightly white alabastrum(diploid) 30.268
CNS0095595Whole white alabastrum(diploid) 20.104
CNS0095596Whole white alabastrum(diploid) 30.196
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.231
CNS0095599Silvery flower (diploied) 20.019
CNS0095600Silvery flower (diploied) 30.044
CNS0095601Golden flower (diploid) 10.075
CNS0095602Golden flower (diploid) 20.178
CNS0095603Golden flower (diploid) 30.065
CNS0095604Slightly white alabastrum(tetraploid) 10.141
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.195
CNS0095607Whole white alabastrum(tetraploid) 10.061
CNS0095608Whole white alabastrum(tetraploid) 20.033
CNS0095609Whole white alabastrum(tetraploid) 30.066
CNS0095610Silvery flower (diploied) 10.125
CNS0095611Silvery flower (diploied) 20.059
CNS0095612Silvery flower (diploied) 30.053
CNS0095613Golden flower (tetraploid) 10.196
CNS0095614Golden flower (tetraploid) 20.074
CNS0095615Golden flower (tetraploid) 30.105
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.057
CRR073299Stem 30.024
CRR073300Leaf 10.188
CRR073301Leaf 20.083
CRR073302Leaf 30.033
CRR073303Juvenile bud 10.017
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.104
CRR073306Third green 10.782
CRR073307Third green 21.033
CRR073308Third green 30.829
CRR073309Second white 12.498
CRR073310Second white 21.482
CRR073311Second white 35.863
CRR073312Silver flowering 17.254
CRR073313Silver flowering 27.085
CRR073314Silver flowering 35.411
CRR073315Gold flowering 11.040
CRR073316Gold flowering 21.332
CRR073317Gold flowering 30.266
CRR073318Tawny withering 15.239
CRR073319Tawny withering 24.609
CRR073320Tawny withering 37.157