Gene detail

Detail information of GWHGAAZE017700

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007037964.1	0	Cytochrome P450 94A2 [Theobroma cacao]
Swissprot	tr\|Q9SMP5\|C94B3_ARATH	0	Cytochrome P450 94B3
trEMBL	tr\|A0A061FY37\|A0A061FY37_THECC	0	Cytochrome P450 94A2 {ECO:0000313\|EMBL:EOY22465.1}
TAIR10	AT3G48520.1	5E-161	cytochrome P450, family 94, subfamily B, polypeptide 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	9787095	9788441	-
GWHAAZE00000005	mRNA	9787095	9788441	-
GWHAAZE00000005	exon	9787095	9788441	-
GWHAAZE00000005	CDS	9787095	9788441	-

Transcript Sequence
>GWHTAAZE017720 ATGTTTCTCCTCTTTCTCTCTCTTCTAGCCATTGCCATTCTTCTAAGCTTTTACAGAAGAAATAATTATAAGCTCATGAATTGTGTTTATGGTCCCACGTCCTACCCATTCATCGGCTGTCTCATTTCCTTCTACAAAAATCGGCTCCGTTTAGTCGACTGGTATACAGATCTTTTGTCAGATTCTCCTACTCAAACCATTGTCGTCAACCGTCTAGGCTCCCGCCGAATCATAGTCACGGCTAACCCTGCCAACGTCGAATACATTTTAAAGACAAACTTTAACAACTATCCCAAGGGAAAACCTTTCACCGAAATCCTCGGCGATCTTTTAGGCGTTGGAATATTCAATGTAGATGGTGAACTTTGGAATACCCAGCGCAAGTTAGCCAGCCACGAGTTCTCCGCCAAGTCACTCAGAGAGTTCGTCGTCAAAATTTTAGAGGACGAAGTGCATAACAGGCTACTACCGTTACTCGAGGCTGCGGTCATTAACGACACCGTTTTGGACCTCCAAGAGATATTAAAGAGATTTGCTTTTGATACCATCTGCCACGTGTCCCTCGGGTACGATCCGTGTTGTTTGGACCTCACGCACCCTGTCCCTCCTCTTGTCACCGCCTTTGATACTGCATCGGAGATTAGCGCAATGAGAGGAATGGCTCCGCTCTACGCTGTGTGGAAAGCTAAAAGGCTTTTAAAAACCGGTACCGAGCGGACTCTGAAAGAATCGATTCAACTCGTTCACGACTCAGTCCATGAAATCATTGCTGTCAAAAAACAGAGCCTACTCCAAAACCGCGCCGATGACGGCGATCTTTTGTCGAGGCTTTTGTCGGCCGGTCACGGCGATGAGGTGGTCAGAGATATGGTGATTAGCTTCATGATGGCCGGACGGGAGACCACGTCGTCCGCGATGACGTGGCTCTTCTGGCTGCTGACGTGGCACGACGACGTTAAGAAGGAGTTGTTGAAGGAAGTAATGGATGAGAGTGTTGATCTCAAGGAGATGAATTATATGAAGGCGTGCTTGTGCGAGTCGATGAGGCTGTACCCGCCGGTGGTGTGGGACTCGAAGCACGCCACCGGCGATGACGTGTTGCCGGACGGAACGCCTGTTTTTAATGGGGATAGGGTGACGTACTTTCCGTACGGTATGGGGAGGATGGAGGAGTTGTGGGGTAAGGACCGGTTTGAGTTTAAACCGGACCGGTGGTTTAGTGGGCCGGACCGGGTTATGAAAATGGTGAGTCCTTATAAGTTTCCGGTTTTTCAGGCAGGTCCGAGGGTGTGTCTTGGGAAAGAGATGGCTTTTATTCAGATGAAGTATGTGGTGAGTAGTGTCTGA

Network for GWHGAAZE017700

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	31	447	8.00E-53

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.216
	SRR3591706	second leaf	0.763
	SRR3591707	mature leaf	2.707
	SRR3591708	Shoot apex	0.548
	SRR3591709	Stem	0.065
	SRR3591710	White floral bud	4.561
	SRR3591711	White flower	0.243
	SRR3591712	Green floral bud	2.583
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	2.068
	SRR8316896	Juvenile bud stage	0.767
	SRR8316897	Juvenile bud stage	8.028
	SRR8316894	Third green stage	0.230
	SRR8316900	Third green stage	0.227
	SRR8316901	Third green stage	1.849
	SRR8316898	Complete white stage	0.472
	SRR8316899	Complete white stage	4.116
	SRR8316903	Complete white stage	1.567
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.202
	SRR8316905	Silver flowering stage	0.165
	SRR8316906	Gold flowering stage	0.008
	SRR8316907	Gold flowering stage	0.096
	SRR8316908	Gold flowering stage	0.194
SRP132670	SRR6706286	Control	1.575
	SRR6706287	Light intensity 50%	1.972
	SRR6706288	Light intensity 20%	2.334
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.894
	CNS0095593	Slightly white alabastrum(diploid) 2	1.179
	CNS0095594	Slightly white alabastrum(diploid) 3	6.204
	CNS0095595	Whole white alabastrum(diploid) 2	1.453
	CNS0095596	Whole white alabastrum(diploid) 3	1.306
	CNS0095597	Whole white alabastrum(diploid) 4	2.805
	CNS0095598	Silvery flower (diploied) 1	3.795
	CNS0095599	Silvery flower (diploied) 2	6.202
	CNS0095600	Silvery flower (diploied) 3	1.224
	CNS0095601	Golden flower (diploid) 1	5.222
	CNS0095602	Golden flower (diploid) 2	6.099
	CNS0095603	Golden flower (diploid) 3	6.812
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.166
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.455
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.063
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.135
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.295
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.810
	CNS0095610	Silvery flower (diploied) 1	0.045
	CNS0095611	Silvery flower (diploied) 2	0.185
	CNS0095612	Silvery flower (diploied) 3	0.273
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.001
CRA001975	CRR073297	Stem 1	2.659
	CRR073298	Stem 2	2.476
	CRR073299	Stem 3	3.155
	CRR073300	Leaf 1	1.024
	CRR073301	Leaf 2	0.504
	CRR073302	Leaf 3	1.801
	CRR073303	Juvenile bud 1	1.387
	CRR073304	Juvenile bud 2	2.340
	CRR073305	Juvenile bud 3	0.335
	CRR073306	Third green 1	0.310
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.187
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.209
	CRR073312	Silver flowering 1	0.022
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	1.300
	CRR073316	Gold flowering 2	18.552
	CRR073317	Gold flowering 3	9.612
	CRR073318	Tawny withering 1	10.820
	CRR073319	Tawny withering 2	89.253
	CRR073320	Tawny withering 3	0.593