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Detail information of GWHGAAZE018093
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002276526.3
1.6104E-117
PREDICTED: transcription factor MYB108 [Vitis vinifera]
Swissprot
tr|Q9LDE1|MY108_ARATH
6E-59
Transcription factor MYB108
trEMBL
tr|D7SJ03|D7SJ03_VITVI
8E-118
Putative uncharacterized protein {ECO:0000313|EMBL:CBI15464.3}
TAIR10
AT1G25340.1
4E-64
myb domain protein 116
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000005
gene
14996597
14998402
+
GWHAAZE00000005
mRNA
14996597
14998402
+
GWHAAZE00000005
exon
14996597
14996773
+
GWHAAZE00000005
exon
14996891
14997020
+
GWHAAZE00000005
exon
14997608
14998402
+
GWHAAZE00000005
five_prime_UTR
14996597
14996613
+
GWHAAZE00000005
CDS
14996614
14996773
+
GWHAAZE00000005
CDS
14996891
14997020
+
GWHAAZE00000005
CDS
14997608
14998208
+
GWHAAZE00000005
three_prime_UTR
14998209
14998402
+
Transcript Sequence
>GWHTAAZE018115 TTGGCTAAAAATCTTTCATGTCTACTATGACAAAGAGTGCAAGTAGTTGTAGCGATGAAGATTTGGTTGATGATGAGCTTAGAAGAGGTCCATGGACTGTTGAAGAAGATACTCTCCTTATTCACTACATCCATTGCCATGGCGAAGGCCGTTGGAATTTGCTAGCCAAGCGTTCTGGATTGAAGAGGAGTGGGAAGAGCTGTAGACTGAGATGGCTGAATTATTTGAAACCAGATGTGAAGCGAGGAAACCTTAGTCCGCAAGAACAGCTTTTGATACTTGAACTTCATTTCAAGTGGGGTAACAGGTGGTCAAAAATTGCACAACATTTACCGGGCAGAACAGACAATGAAATCAAGAACTACTGGAGAACTCGCGTACAAAAACAGGCAAGGCACCTCAAGATCGATTCAAACAGCACTGCGTTTAAAGAAGTGATTAGGTGCCTTTGGATGCCCCATTTGCTTCAAAAAATCCACGGATCTGCTCCTCTAGACCCGCATTTCAAGAATTCACTGGGGACTCTGCCACTCAATGAATCACCACCGCCGCTTCCGCTGCAAGTTCCTCTAGATTCAAGCCGTGTTAATCATCAGAAAAATTCTAGCTCAGATAACTGTACCAGCCCAAGCATTTGTTCTTCAGATCAATCTATGAATTTTTCACAATTCCCTACTGACATTACCGATTATCTAACAAATCCATTTAGTAGCATGGATAATAGCTATGACATGGGAACCTTCGGTCTAGATGCTGCATCGTCAGTAATGGGTGAATTCGTGGAGCCAATGGGTGATCGCCACGTGATGGAAAATAATTGGATTGGCGATGATGAAGTGGCAGATAGTTTGTGGAATATGGATGAATTATGGCAGCTACAGCAGAGGGGCAACCAGCTCGAGTACTAATTGTTGCTTAGAAAGATTAGATTCTTTTTTTGAAGAAAATAATTTTGTTAAGGGAATTTAATTTTCTAAATCCAGTGAAAGAAGGGAAAAAAGGCCCATTACTAGTTAGTGCTTTTTACACAGTTGATTTGTACGCATGAGAAGAAGTTATTTGTGTTTATGACAGAATCTACTTGGTAATTATGTGAAATTAA
Network for GWHGAAZE018093
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF00249.32
Myb_DNA-binding
23
70
2.30E-15
PF00249.32
Myb_DNA-binding
76
119
2.20E-14
Protein Sequence
>GWHPAAZE018104 MSTMTKSASSCSDEDLVDDELRRGPWTVEEDTLLIHYIHCHGEGRWNLLAKRSGLKRSGKSCRLRWLNYLKPDVKRGNLSPQEQLLILELHFKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDSNSTAFKEVIRCLWMPHLLQKIHGSAPLDPHFKNSLGTLPLNESPPPLPLQVPLDSSRVNHQKNSSSDNCTSPSICSSDQSMNFSQFPTDITDYLTNPFSSMDNSYDMGTFGLDAASSVMGEFVEPMGDRHVMENNWIGDDEVADSLWNMDELWQLQQRGNQLEY
Gene family
Gene family
subfamily
Transcription Factors Family
MYB
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
GO:0003677
molecular_function
DNA binding
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
0.685
SRR3591706
second leaf
0.000
SRR3591707
mature leaf
0.132
SRR3591708
Shoot apex
0.000
SRR3591709
Stem
0.632
SRR3591710
White floral bud
0.368
SRR3591711
White flower
25.184
SRR3591712
Green floral bud
0.263
SRR3591713
Yellow flower
53.620
SRP173429
SRR8316895
Juvenile bud stage
0.000
SRR8316896
Juvenile bud stage
0.000
SRR8316897
Juvenile bud stage
0.000
SRR8316894
Third green stage
0.000
SRR8316900
Third green stage
0.200
SRR8316901
Third green stage
0.085
SRR8316898
Complete white stage
0.414
SRR8316899
Complete white stage
0.770
SRR8316903
Complete white stage
0.237
SRR8316902
Silver flowering stage
4.075
SRR8316904
Silver flowering stage
4.094
SRR8316905
Silver flowering stage
3.492
SRR8316906
Gold flowering stage
28.824
SRR8316907
Gold flowering stage
28.211
SRR8316908
Gold flowering stage
46.548
SRP132670
SRR6706286
Control
0.305
SRR6706287
Light intensity 50%
0.170
SRR6706288
Light intensity 20%
0.074
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
1.475
CNS0095593
Slightly white alabastrum(diploid) 2
0.490
CNS0095594
Slightly white alabastrum(diploid) 3
1.291
CNS0095595
Whole white alabastrum(diploid) 2
0.569
CNS0095596
Whole white alabastrum(diploid) 3
0.639
CNS0095597
Whole white alabastrum(diploid) 4
1.159
CNS0095598
Silvery flower (diploied) 1
4.335
CNS0095599
Silvery flower (diploied) 2
5.390
CNS0095600
Silvery flower (diploied) 3
17.510
CNS0095601
Golden flower (diploid) 1
10.655
CNS0095602
Golden flower (diploid) 2
35.831
CNS0095603
Golden flower (diploid) 3
38.465
CNS0095604
Slightly white alabastrum(tetraploid) 1
0.305
CNS0095605
Slightly white alabastrum(tetraploid) 2
0.600
CNS0095606
Slightly white alabastrum(tetraploid) 3
0.189
CNS0095607
Whole white alabastrum(tetraploid) 1
0.725
CNS0095608
Whole white alabastrum(tetraploid) 2
0.540
CNS0095609
Whole white alabastrum(tetraploid) 3
0.436
CNS0095610
Silvery flower (diploied) 1
28.923
CNS0095611
Silvery flower (diploied) 2
14.916
CNS0095612
Silvery flower (diploied) 3
6.965
CNS0095613
Golden flower (tetraploid) 1
33.116
CNS0095614
Golden flower (tetraploid) 2
38.915
CNS0095615
Golden flower (tetraploid) 3
24.603
CRA001975
CRR073297
Stem 1
0.234
CRR073298
Stem 2
0.000
CRR073299
Stem 3
0.000
CRR073300
Leaf 1
0.260
CRR073301
Leaf 2
0.000
CRR073302
Leaf 3
0.000
CRR073303
Juvenile bud 1
0.076
CRR073304
Juvenile bud 2
0.152
CRR073305
Juvenile bud 3
0.000
CRR073306
Third green 1
0.000
CRR073307
Third green 2
0.107
CRR073308
Third green 3
0.018
CRR073309
Second white 1
3.751
CRR073310
Second white 2
4.526
CRR073311
Second white 3
5.062
CRR073312
Silver flowering 1
10.755
CRR073313
Silver flowering 2
10.581
CRR073314
Silver flowering 3
15.140
CRR073315
Gold flowering 1
0.002
CRR073316
Gold flowering 2
1.280
CRR073317
Gold flowering 3
0.000
CRR073318
Tawny withering 1
13.833
CRR073319
Tawny withering 2
12.729
CRR073320
Tawny withering 3
5.199