Detail information of GWHGAAZE018556


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFZ15799.10caffeoyl-CoA O-methyltransferase [Lonicera japonica]
Swissprottr|Q43095|CAMT_POPTM4E-168Caffeoyl-CoA O-methyltransferase
trEMBLtr|K9W630|K9W630_LONJA0Caffeoyl-CoA O-methyltransferase {ECO:0000313|EMBL:AFZ15799.1}
TAIR10AT4G34050.13E-127S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2111107921113170+
GWHAAZE00000005mRNA2111107921113170+
GWHAAZE00000005exon2111107921111171+
GWHAAZE00000005exon2111131921111398+
GWHAAZE00000005exon2111209321112237+
GWHAAZE00000005exon2111253821112669+
GWHAAZE00000005exon2111287721113170+
GWHAAZE00000005CDS2111107921111171+
GWHAAZE00000005CDS2111131921111398+
GWHAAZE00000005CDS2111209321112237+
GWHAAZE00000005CDS2111253821112669+
GWHAAZE00000005CDS2111287721113170+
Transcript Sequence

Network for GWHGAAZE018556

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01596.18Methyltransf_3352464.30E-98
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00588E2.1.1.104 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941

Gene Ontology

GO term OntologyName
GO:0008171molecular_functionO-methyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf46.720
SRR3591706second leaf19.365
SRR3591707mature leaf3.952
SRR3591708Shoot apex13.567
SRR3591709Stem477.275
SRR3591710White floral bud14.701
SRR3591711White flower10.136
SRR3591712Green floral bud20.539
SRR3591713Yellow flower3.976
SRP173429 SRR8316895Juvenile bud stage 121.428
SRR8316896Juvenile bud stage 82.456
SRR8316897Juvenile bud stage 18.849
SRR8316894Third green stage 11.584
SRR8316900Third green stage 20.227
SRR8316901Third green stage 19.116
SRR8316898Complete white stage 2.115
SRR8316899Complete white stage 8.930
SRR8316903Complete white stage 1.550
SRR8316902Silver flowering stage0.980
SRR8316904Silver flowering stage0.566
SRR8316905Silver flowering stage0.226
SRR8316906Gold flowering stage 1.155
SRR8316907Gold flowering stage 1.150
SRR8316908Gold flowering stage 0.398
SRP132670SRR6706286Control18.138
SRR6706287Light intensity 50%18.559
SRR6706288Light intensity 20%19.562
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.317
CNS0095593Slightly white alabastrum(diploid) 24.545
CNS0095594Slightly white alabastrum(diploid) 344.546
CNS0095595Whole white alabastrum(diploid) 23.772
CNS0095596Whole white alabastrum(diploid) 36.568
CNS0095597Whole white alabastrum(diploid) 46.200
CNS0095598Silvery flower (diploied) 13.152
CNS0095599Silvery flower (diploied) 21.349
CNS0095600Silvery flower (diploied) 34.574
CNS0095601Golden flower (diploid) 10.964
CNS0095602Golden flower (diploid) 21.395
CNS0095603Golden flower (diploid) 31.989
CNS0095604Slightly white alabastrum(tetraploid) 18.203
CNS0095605Slightly white alabastrum(tetraploid) 29.163
CNS0095606Slightly white alabastrum(tetraploid) 326.233
CNS0095607Whole white alabastrum(tetraploid) 11.582
CNS0095608Whole white alabastrum(tetraploid) 21.377
CNS0095609Whole white alabastrum(tetraploid) 321.519
CNS0095610Silvery flower (diploied) 11.805
CNS0095611Silvery flower (diploied) 21.782
CNS0095612Silvery flower (diploied) 30.584
CNS0095613Golden flower (tetraploid) 10.172
CNS0095614Golden flower (tetraploid) 21.563
CNS0095615Golden flower (tetraploid) 30.525
CRA001975CRR073297Stem 187.536
CRR073298Stem 253.044
CRR073299Stem 340.250
CRR073300Leaf 14.939
CRR073301Leaf 25.566
CRR073302Leaf 37.916
CRR073303Juvenile bud 11.800
CRR073304Juvenile bud 20.751
CRR073305Juvenile bud 33.551
CRR073306Third green 10.272
CRR073307Third green 20.832
CRR073308Third green 30.217
CRR073309Second white 10.000
CRR073310Second white 20.321
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.537
CRR073316Gold flowering 20.538
CRR073317Gold flowering 31.167
CRR073318Tawny withering 136.673
CRR073319Tawny withering 211.781
CRR073320Tawny withering 359.977