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Detail information of GWHGAAZE018660
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
NP_001267942.1
7.1879E-175
uncharacterized protein LOC100263479 [Vitis vinifera]
Swissprot
tr|O81884|GALDH_ARATH
3E-162
L-galactose dehydrogenase
trEMBL
tr|A5JPK6|A5JPK6_VITVI
3E-175
L-galactose dehydrogenase {ECO:0000313|EMBL:ABQ41113.1}
TAIR10
AT4G33670.1
9E-130
NAD(P)-linked oxidoreductase superfamily protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000005
gene
22413790
22417323
+
GWHAAZE00000005
mRNA
22413790
22417323
+
GWHAAZE00000005
exon
22413790
22414063
+
GWHAAZE00000005
exon
22414511
22414722
+
GWHAAZE00000005
exon
22415239
22415302
+
GWHAAZE00000005
exon
22415365
22415537
+
GWHAAZE00000005
exon
22415795
22415923
+
GWHAAZE00000005
exon
22416893
22417323
+
GWHAAZE00000005
CDS
22413790
22414063
+
GWHAAZE00000005
CDS
22414511
22414722
+
GWHAAZE00000005
CDS
22415239
22415302
+
GWHAAZE00000005
CDS
22415365
22415537
+
GWHAAZE00000005
CDS
22415795
22415923
+
GWHAAZE00000005
CDS
22416893
22417024
+
GWHAAZE00000005
three_prime_UTR
22417025
22417323
+
Transcript Sequence
>GWHTAAZE018682 CACTCTTTCCCGGGAAATTTCGTGTTCGATCGTATTTGTCCTTATCCCCTCAAAAGCACCGGCAACTTCTGCAACACAAAAAAAGAAACCCTAGATTATACAAAAATGGAAAAATTAGAGCTCAGAGACCTTGGAAAAACCGGCCTCAAGCTCAGCTGCGTCGGCTTCGGCGCTTCCCCTCTCGGCAACGTCTTCGGTCCCGTCACCGAACAGGAAGCCAATGCCGCTGTTCGCGAAGCCTTTCGCCTCGGCATCAACTTCTTCGACACTTCCCTATCGGAGAAAGCCCTAGGGAAGGCGCTGAAAGCTGTGGGAGTGCCGAGAAGCGAGTATATTGTGTCGACAAAGTGTGGGAGATATGCTGAGGGTTTTGATTTCAGTGCTGAGAGGGTGATTAGGAGCATTGATGAGAGTTTGGAGAGGCTACAGCTTGATTATGTTGATATATTGCAATGCCACGATATTGAATTTGGGTCCCTTGATCAGATTGTGAATGAGACAATCCCTGCCCTCCAAACACTGAAAGAAACTGGGAAGATCCGGTTCATTGTCGATGTAATCCTATCATACTGTCACTACGGCATTAATGACTCGACATTGGAGGATTTACTGCCTTACCTGAAAAACAAGGGTGTTGGGGTGATCACTGCTTCTCCACTTGCAATGGGGCTTCTTACAGAGAGCGGCCCTCCAGAGTGGCATCCAGCTTCCCCTGAACTCAAGGCTGCATGCCAGGTTTCTGCTGCTTACTGTAAGGAGAAGGGGAAGAATATATCAAAGCTGGCTATGCAATACAGCTTATTGAATAAAGACATTGCTTCAGTACTTGTTGGAATGAACTCCGTTAGTCAGGTGGAGATAAATGTGGCTGCTGCTATAGAACTTGCAACGGTTGGGATAGATGAGAAAACTCTATCAGAGGTTGAAGAACTTCTGAAACCAGTAAAGAATCAGACATGGCCTAGCGGCATTCAACAAGGTTGACTAGTTATAGCAGATCCCAAACCCATGTCTATTCCCATATTATGTGAAAACTGATGTGTACAACCCAGCGCCGGTCTACTCTTGTGACCTTCCAATTTATTGTGAGAATGTTTTTCCACTGTTCCTTGAACTTCAGGTCCCTTCTTATTTGTGTTTCTCAGGTTCTGTATTTTTTGTCTGTTTGTGTCACTGAAAGATAAATAATTGAAAACCAAACTACAATCAACAGACTTCTCTCCCATGTGCATATTCAGATTATTTAAATAAGACTTCCAGATTGGTTTTTGTTTATATGGAAA
Network for GWHGAAZE018660
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF00248.22
Aldo_ket_red
54
183
6.10E-30
PF00248.22
Aldo_ket_red
187
294
2.90E-13
Protein Sequence
>GWHPAAZE018671 HSFPGNFVFDRICPYPLKSTGNFCNTKKETLDYTKMEKLELRDLGKTGLKLSCVGFGASPLGNVFGPVTEQEANAAVREAFRLGINFFDTSLSEKALGKALKAVGVPRSEYIVSTKCGRYAEGFDFSAERVIRSIDESLERLQLDYVDILQCHDIEFGSLDQIVNETIPALQTLKETGKIRFIVDVILSYCHYGINDSTLEDLLPYLKNKGVGVITASPLAMGLLTESGPPEWHPASPELKAACQVSAAYCKEKGKNISKLAMQYSLLNKDIASVLVGMNSVSQVEINVAAAIELATVGIDEKTLSEVEELLKPVKNQTWPSGIQQG
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K17744
GalDH
Metabolic pathways
map01100
Biosynthesis of secondary metabolites
map01110
Ascorbate and aldarate metabolism
map00053
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
73.645
SRR3591706
second leaf
26.087
SRR3591707
mature leaf
15.665
SRR3591708
Shoot apex
49.350
SRR3591709
Stem
57.855
SRR3591710
White floral bud
39.813
SRR3591711
White flower
34.342
SRR3591712
Green floral bud
42.492
SRR3591713
Yellow flower
24.504
SRP173429
SRR8316895
Juvenile bud stage
32.663
SRR8316896
Juvenile bud stage
43.074
SRR8316897
Juvenile bud stage
24.080
SRR8316894
Third green stage
14.782
SRR8316900
Third green stage
41.806
SRR8316901
Third green stage
45.281
SRR8316898
Complete white stage
15.601
SRR8316899
Complete white stage
58.117
SRR8316903
Complete white stage
21.762
SRR8316902
Silver flowering stage
9.913
SRR8316904
Silver flowering stage
13.421
SRR8316905
Silver flowering stage
6.511
SRR8316906
Gold flowering stage
19.982
SRR8316907
Gold flowering stage
17.440
SRR8316908
Gold flowering stage
19.252
SRP132670
SRR6706286
Control
36.179
SRR6706287
Light intensity 50%
35.480
SRR6706288
Light intensity 20%
37.755
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
47.636
CNS0095593
Slightly white alabastrum(diploid) 2
54.950
CNS0095594
Slightly white alabastrum(diploid) 3
46.572
CNS0095595
Whole white alabastrum(diploid) 2
43.727
CNS0095596
Whole white alabastrum(diploid) 3
38.704
CNS0095597
Whole white alabastrum(diploid) 4
39.790
CNS0095598
Silvery flower (diploied) 1
49.763
CNS0095599
Silvery flower (diploied) 2
48.331
CNS0095600
Silvery flower (diploied) 3
35.638
CNS0095601
Golden flower (diploid) 1
50.711
CNS0095602
Golden flower (diploid) 2
40.424
CNS0095603
Golden flower (diploid) 3
37.105
CNS0095604
Slightly white alabastrum(tetraploid) 1
43.107
CNS0095605
Slightly white alabastrum(tetraploid) 2
41.057
CNS0095606
Slightly white alabastrum(tetraploid) 3
62.610
CNS0095607
Whole white alabastrum(tetraploid) 1
42.877
CNS0095608
Whole white alabastrum(tetraploid) 2
38.977
CNS0095609
Whole white alabastrum(tetraploid) 3
41.331
CNS0095610
Silvery flower (diploied) 1
31.689
CNS0095611
Silvery flower (diploied) 2
41.427
CNS0095612
Silvery flower (diploied) 3
29.220
CNS0095613
Golden flower (tetraploid) 1
24.431
CNS0095614
Golden flower (tetraploid) 2
27.965
CNS0095615
Golden flower (tetraploid) 3
19.778
CRA001975
CRR073297
Stem 1
35.016
CRR073298
Stem 2
36.542
CRR073299
Stem 3
37.761
CRR073300
Leaf 1
39.998
CRR073301
Leaf 2
34.041
CRR073302
Leaf 3
37.150
CRR073303
Juvenile bud 1
39.118
CRR073304
Juvenile bud 2
26.425
CRR073305
Juvenile bud 3
41.669
CRR073306
Third green 1
16.070
CRR073307
Third green 2
16.328
CRR073308
Third green 3
16.895
CRR073309
Second white 1
17.535
CRR073310
Second white 2
11.457
CRR073311
Second white 3
8.060
CRR073312
Silver flowering 1
8.612
CRR073313
Silver flowering 2
12.220
CRR073314
Silver flowering 3
9.436
CRR073315
Gold flowering 1
22.181
CRR073316
Gold flowering 2
26.343
CRR073317
Gold flowering 3
22.095
CRR073318
Tawny withering 1
58.050
CRR073319
Tawny withering 2
49.618
CRR073320
Tawny withering 3
51.191