Detail information of GWHGAAZE018734


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011092701.10PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [Sesamum indicum]
Swissprottr|Q00218|AROG_ARATH0Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic (Precursor)
trEMBLtr|A0A022RFG9|A0A022RFG9_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU39127.1}
TAIR10AT4G33510.103-deoxy-d-arabino-heptulosonate 7-phosphate synthase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2354341823548534+
GWHAAZE00000005mRNA2354341823548534+
GWHAAZE00000005exon2354341823543537+
GWHAAZE00000005exon2354363023543902+
GWHAAZE00000005exon2354547923545756+
GWHAAZE00000005exon2354608123546357+
GWHAAZE00000005exon2354697923547224+
GWHAAZE00000005exon2354826823548534+
GWHAAZE00000005CDS2354341823543537+
GWHAAZE00000005CDS2354363023543902+
GWHAAZE00000005CDS2354547923545756+
GWHAAZE00000005CDS2354608123546357+
GWHAAZE00000005CDS2354697923547224+
GWHAAZE00000005CDS2354826823548534+
Transcript Sequence

Network for GWHGAAZE018734

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01474.17DAHP_synth_2394676.30E-193
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01626E2.5.1.54, aroF, aroG, aroH Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Quorum sensingmap02024

Gene Ontology

GO term OntologyName
GO:0009073biological_processaromatic amino acid family biosynthetic process
GO:0003824molecular_functioncatalytic activity
GO:0003849molecular_function3-deoxy-7-phosphoheptulonate synthase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf73.243
SRR3591706second leaf80.599
SRR3591707mature leaf157.764
SRR3591708Shoot apex33.173
SRR3591709Stem100.429
SRR3591710White floral bud167.511
SRR3591711White flower212.754
SRR3591712Green floral bud106.847
SRR3591713Yellow flower178.203
SRP173429 SRR8316895Juvenile bud stage 60.099
SRR8316896Juvenile bud stage 86.778
SRR8316897Juvenile bud stage 36.089
SRR8316894Third green stage 34.952
SRR8316900Third green stage 137.039
SRR8316901Third green stage 122.722
SRR8316898Complete white stage 75.247
SRR8316899Complete white stage 158.032
SRR8316903Complete white stage 107.074
SRR8316902Silver flowering stage101.354
SRR8316904Silver flowering stage133.855
SRR8316905Silver flowering stage87.343
SRR8316906Gold flowering stage 238.277
SRR8316907Gold flowering stage 254.960
SRR8316908Gold flowering stage 259.727
SRP132670SRR6706286Control203.331
SRR6706287Light intensity 50%210.703
SRR6706288Light intensity 20%216.125
CNP0000432CNS0095592Slightly white alabastrum(diploid) 156.243
CNS0095593Slightly white alabastrum(diploid) 258.588
CNS0095594Slightly white alabastrum(diploid) 360.159
CNS0095595Whole white alabastrum(diploid) 259.821
CNS0095596Whole white alabastrum(diploid) 361.688
CNS0095597Whole white alabastrum(diploid) 459.270
CNS0095598Silvery flower (diploied) 1100.372
CNS0095599Silvery flower (diploied) 2102.328
CNS0095600Silvery flower (diploied) 3262.597
CNS0095601Golden flower (diploid) 189.392
CNS0095602Golden flower (diploid) 2221.717
CNS0095603Golden flower (diploid) 3219.736
CNS0095604Slightly white alabastrum(tetraploid) 141.803
CNS0095605Slightly white alabastrum(tetraploid) 233.458
CNS0095606Slightly white alabastrum(tetraploid) 350.413
CNS0095607Whole white alabastrum(tetraploid) 131.784
CNS0095608Whole white alabastrum(tetraploid) 229.294
CNS0095609Whole white alabastrum(tetraploid) 368.128
CNS0095610Silvery flower (diploied) 1126.982
CNS0095611Silvery flower (diploied) 2126.495
CNS0095612Silvery flower (diploied) 3137.005
CNS0095613Golden flower (tetraploid) 1108.759
CNS0095614Golden flower (tetraploid) 2120.426
CNS0095615Golden flower (tetraploid) 3162.102
CRA001975CRR073297Stem 197.724
CRR073298Stem 2102.723
CRR073299Stem 3119.574
CRR073300Leaf 1134.815
CRR073301Leaf 2135.110
CRR073302Leaf 3130.809
CRR073303Juvenile bud 1152.887
CRR073304Juvenile bud 2157.202
CRR073305Juvenile bud 3192.462
CRR073306Third green 1213.097
CRR073307Third green 2162.655
CRR073308Third green 3184.794
CRR073309Second white 1254.069
CRR073310Second white 2163.542
CRR073311Second white 3178.217
CRR073312Silver flowering 1177.764
CRR073313Silver flowering 2180.798
CRR073314Silver flowering 3167.814
CRR073315Gold flowering 1115.142
CRR073316Gold flowering 2152.893
CRR073317Gold flowering 3137.467
CRR073318Tawny withering 175.476
CRR073319Tawny withering 257.601
CRR073320Tawny withering 374.231