Detail information of GWHGAAZE020749


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene1994011419941664-
GWHAAZE00000006mRNA1994011419941664-
GWHAAZE00000006exon1994127419941664-
GWHAAZE00000006exon1994011419940165-
GWHAAZE00000006five_prime_UTR1994151319941664-
GWHAAZE00000006CDS1994127419941512-
GWHAAZE00000006CDS1994015319940165-
GWHAAZE00000006three_prime_UTR1994011419940152-
Transcript Sequence

Network for GWHGAAZE020749

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0245map03022 Basal transcription factors
GO:0005685 U1 snRNP GOslim:cellular_component
GO:0005669 transcription factor TFIID complex GOslim:cellular_component
GO:0006376 mRNA splice site selection GOslim:biological_process
GO:0006352 DNA-templated transcription, initiation GOslim:biological_process
GO:0003676 nucleic acid binding GOslim:molecular_function
GO:0003729 mRNA binding GOslim:molecular_function
map03040 Spliceosome
map04657 IL-17 signaling pathway


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.075
SRR3591712Green floral bud0.001
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 5.295
SRR8316896Juvenile bud stage 6.094
SRR8316897Juvenile bud stage 3.805
SRR8316894Third green stage 3.534
SRR8316900Third green stage 4.762
SRR8316901Third green stage 7.365
SRR8316898Complete white stage 0.930
SRR8316899Complete white stage 7.501
SRR8316903Complete white stage 5.081
SRR8316902Silver flowering stage2.681
SRR8316904Silver flowering stage4.701
SRR8316905Silver flowering stage1.191
SRR8316906Gold flowering stage 6.298
SRR8316907Gold flowering stage 4.801
SRR8316908Gold flowering stage 4.027
SRP132670SRR6706286Control6.707
SRR6706287Light intensity 50%6.939
SRR6706288Light intensity 20%8.839
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.901
CNS0095593Slightly white alabastrum(diploid) 23.328
CNS0095594Slightly white alabastrum(diploid) 33.196
CNS0095595Whole white alabastrum(diploid) 23.022
CNS0095596Whole white alabastrum(diploid) 32.561
CNS0095597Whole white alabastrum(diploid) 42.640
CNS0095598Silvery flower (diploied) 12.495
CNS0095599Silvery flower (diploied) 24.231
CNS0095600Silvery flower (diploied) 34.584
CNS0095601Golden flower (diploid) 13.221
CNS0095602Golden flower (diploid) 23.610
CNS0095603Golden flower (diploid) 33.866
CNS0095604Slightly white alabastrum(tetraploid) 12.761
CNS0095605Slightly white alabastrum(tetraploid) 23.375
CNS0095606Slightly white alabastrum(tetraploid) 34.788
CNS0095607Whole white alabastrum(tetraploid) 12.014
CNS0095608Whole white alabastrum(tetraploid) 21.251
CNS0095609Whole white alabastrum(tetraploid) 33.205
CNS0095610Silvery flower (diploied) 13.404
CNS0095611Silvery flower (diploied) 24.601
CNS0095612Silvery flower (diploied) 33.140
CNS0095613Golden flower (tetraploid) 12.326
CNS0095614Golden flower (tetraploid) 23.448
CNS0095615Golden flower (tetraploid) 31.861
CRA001975CRR073297Stem 17.426
CRR073298Stem 28.716
CRR073299Stem 31.006
CRR073300Leaf 19.804
CRR073301Leaf 29.816
CRR073302Leaf 30.179
CRR073303Juvenile bud 10.989
CRR073304Juvenile bud 20.162
CRR073305Juvenile bud 30.747
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.037
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.241
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.441
CRR073316Gold flowering 20.837
CRR073317Gold flowering 30.013
CRR073318Tawny withering 11.209
CRR073319Tawny withering 23.695
CRR073320Tawny withering 31.561