Gene detail

Detail information of GWHGAAZE021087

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	34809211	34819635	+
GWHAAZE00000006	mRNA	34809211	34819635	+
GWHAAZE00000006	exon	34809211	34809972	+
GWHAAZE00000006	exon	34810602	34810775	+
GWHAAZE00000006	exon	34812517	34812678	+
GWHAAZE00000006	exon	34813894	34814036	+
GWHAAZE00000006	exon	34814977	34815052	+
GWHAAZE00000006	exon	34815194	34815366	+
GWHAAZE00000006	exon	34815677	34815758	+
GWHAAZE00000006	exon	34816163	34816240	+
GWHAAZE00000006	exon	34816358	34816519	+
GWHAAZE00000006	exon	34817261	34817524	+
GWHAAZE00000006	exon	34818783	34818887	+
GWHAAZE00000006	exon	34819300	34819401	+
GWHAAZE00000006	exon	34819486	34819635	+
GWHAAZE00000006	CDS	34809211	34809972	+
GWHAAZE00000006	CDS	34810602	34810775	+
GWHAAZE00000006	CDS	34812517	34812678	+
GWHAAZE00000006	CDS	34813894	34814036	+
GWHAAZE00000006	CDS	34814977	34815052	+
GWHAAZE00000006	CDS	34815194	34815366	+
GWHAAZE00000006	CDS	34815677	34815758	+
GWHAAZE00000006	CDS	34816163	34816240	+
GWHAAZE00000006	CDS	34816358	34816519	+
GWHAAZE00000006	CDS	34817261	34817524	+
GWHAAZE00000006	CDS	34818783	34818887	+
GWHAAZE00000006	CDS	34819300	34819401	+
GWHAAZE00000006	CDS	34819486	34819635	+

Transcript Sequence
>GWHTAAZE021111 ATGGCGACGGAGATGGCGAACGTGGATCCGGAGGGGATCGACGGCGTGAGGATGACGTGGAACGTGTGGCCCCGGACGAAGGTGGAGGCGAGTAAGTGCGTGATCCCAATCGCCGCCTCGATTTCCCCGATCCGGCCGAACAGTGAGATCCCCACGCTCCCGTACGCACCGCTGCGTTGCAAGACCTGCTCGGTGGTGCTCAACCCCTTCTGCCGCGTCGACTTCGCCGCGCTCATCTGGATCTGCCCGTTCTGCTTCCAGCGAAACCACTTCCCCCACCACTACTCCGCCATCTCTGACACGAACGTCCCCGCGGAGCTCTACCCGCAATACACCACGATACAATACTCCCTTAACCCTAACCCTAGCAACCCTAATTCCCCAACTTCCCCAATTTCTCCTCCTCCGGTCTACGTGTTCCTCCTCGATACGTGTGTGATCGAGGAGGAGCTGGATTTCGCCAAGTCGGCGTTGAAACAAGCGATCGGGTTGTTGCCCGATAATGCAATGGTTGGATTTGTTTCGTTTGGGACTCAGGTTCAGGTCCATGAATTAGGGTTTTCGGATATGTCGAAGGTGTATGTTTTTAGGGGATCGAAGGAGTTGTCGAAAGATCAGGTTTTGGATCAGTTAGGGCTTGGGAGTGTTACTGGGAGGAGGCCCGGACCAGGGTTTCCGAAGGCCGTTCAGACCGGGTTCCCTGGTTCCGGGGTTACTAGGTTTTTGTTGCCGGCTTCAGAGTGCGAATACACGCTTGATTCGCTTTTGGACGAGTTGGGCACGGACCAATGGCCAGTTACACCTGGTAATCGGTCCTTACGGTGCACTGGGGTGGCGCTAAGTGTTGCAACAGGTTTGCTTGGGGCTTGTTCTCCTGGTACTGGTGGTCGTATTATTGCTTTGGTGGGCGGTCCTTGCACGGAAGGACCGGGCTCGATTGTATCAAAAGATATGTCGGATCCTGTTCGTTCTCATAAAGATCTAGATAAGGATGCAGCACCGTATTTTAGAAAAGCAGTCCAATTCTATGAGGAACTTGCAAAGCAGCTGGTTAGCCAGGGTCATGTCTTGGACCTTTTTGCCTCTGCACTTGATCAGGTTGGGGTTGCAGAGATGAAGGTTGCTATTGAAAGAACTGGTGGCCTTGTTGTTCTAGCTGAAAGCTTTGGCCATTCTGTTTTTAAAGACTCTTTTAGGCGTGTTTTTGAAGAAGGGGAGCAGTCTCTGGGTTTATCCTTCAATGGAACGCTCGAGATACACTGTTCAAAAGATATTAAGATACAGGGGATTATTGGACCTTGCACATCTATGGAGAAGAAAGGACCTGCTGTTGCCAACACAGTTATTGGACAAGGAAATACTACAGCATGGAAAATGTGTGGCCTTGATAAAAGCACTTGTTTAACTGTTTTCTTTGACATCTCATCAAGTGAAAAATCAGATCCTGCTGGAAATATAAACCCCCAGTTGTACATACAGTTTCTTACAAGTTACCAGAGTTCTGACGGTCAAATGAAGCTGCGAGTTACAACCATTACTAGAAGATGGATTGATAGTGCTGTTGGCTCAGAGGAGTTGGTACAAGGATTTGATCAAGAAACTGCTGCGGTTGTAATTGCGAGATTAACTTCTTATAAAATGGAGATGGAGGAGGGATTTGACGCCACACGGTGGTTAGATCGGAACCTTATTCGTCTCTGTTCAAAATTTGGTGATTATCGGAAGGATGATCCAGCTTCATTTACATTAAACCCCTGTTTTTCGTTGTTCCCTCAATTCATGTTTAATCTTCGGCGATCACAATTTGTGCAGGTGTTCAATAATAGTCCAGACGAGACAGCGTACTTCCGCATGTTGTTAAACCGGGAAAATGTGACGAACTCAGCCGTGATGATTCAACCTTCCCTAATATCATATTCGTTTAATTCCCTTCCTGCACCAGCTTTGCTGGACGTGGCATCTATAGCTGCCGATCGTATCCTTTTGTTGGATTCATACTTCAGTGTCGTTATTTTCCATGGAATGACAATTGCCCAGTGGAGGAATATGGGCTACCAGAATCAGCCTGAACATCAGGCATTTGCTCAGTTATTGCAAGCTCCCCGTGATGATTCCCAATTAATTATCCGCGAACGGTTCCCCACCCCAAGATTGGTGGTGTGTGATCAGCATGGCTCTCAGGCCCTCATGCCCACACCACTACATTCAAACCTTGGGAATGCCATGCTGCCTGTGGCTCCCTATCCCCAACCCCCAAACAAGGCGAATCCTGTGTCTATCCGTGCTAGGTTCCTACTGGCAAAGTTGAACCCGTCAGCCACGTACAACAACGCTCATGAGATGGCAGCTGGAATGGACGTGATCTTCACCGATGACGTTAACCTTCAAGTGTTCATCGAGCATCTTCAAAGGCTGGCCGTTCAATCTTCTTGA

Network for GWHGAAZE021087

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0126	GO:0004379 glycylpeptide N-tetradecanoyltransferase activity GOslim:molecular_function map04390 Hippo signaling pathway map04350 TGF-beta signaling pathway map04728 Dopaminergic synapse map04261 Adrenergic signaling in cardiomyocytes map04730 Long-term depression map04391 Hippo signaling pathway - fly map04152 AMPK signaling pathway map04113 Meiosis - yeast map04151 PI3K-Akt signaling pathway map04111 Cell cycle - yeast map04071 Sphingolipid signaling pathway map04530 Tight junction map04114 Oocyte meiosis map03015 mRNA surveillance pathway

Module ID

Function Annotation

CFinderModule0126

GO:0004379 glycylpeptide N-tetradecanoyltransferase activity GOslim:molecular_function
map04390 Hippo signaling pathway
map04350 TGF-beta signaling pathway
map04728 Dopaminergic synapse
map04261 Adrenergic signaling in cardiomyocytes
map04730 Long-term depression
map04391 Hippo signaling pathway - fly
map04152 AMPK signaling pathway
map04113 Meiosis - yeast
map04151 PI3K-Akt signaling pathway
map04111 Cell cycle - yeast
map04071 Sphingolipid signaling pathway
map04530 Tight junction
map04114 Oocyte meiosis
map03015 mRNA surveillance pathway

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	106.017
	SRR3591706	second leaf	49.853
	SRR3591707	mature leaf	43.284
	SRR3591708	Shoot apex	66.633
	SRR3591709	Stem	81.054
	SRR3591710	White floral bud	149.573
	SRR3591711	White flower	96.691
	SRR3591712	Green floral bud	133.378
	SRR3591713	Yellow flower	85.068
SRP173429	SRR8316895	Juvenile bud stage	52.797
	SRR8316896	Juvenile bud stage	70.833
	SRR8316897	Juvenile bud stage	32.071
	SRR8316894	Third green stage	34.115
	SRR8316900	Third green stage	115.515
	SRR8316901	Third green stage	103.145
	SRR8316898	Complete white stage	44.127
	SRR8316899	Complete white stage	119.176
	SRR8316903	Complete white stage	78.516
	SRR8316902	Silver flowering stage	44.100
	SRR8316904	Silver flowering stage	57.050
	SRR8316905	Silver flowering stage	26.482
	SRR8316906	Gold flowering stage	92.831
	SRR8316907	Gold flowering stage	91.777
	SRR8316908	Gold flowering stage	92.198
SRP132670	SRR6706286	Control	100.246
	SRR6706287	Light intensity 50%	97.278
	SRR6706288	Light intensity 20%	100.840
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	64.847
	CNS0095593	Slightly white alabastrum(diploid) 2	65.401
	CNS0095594	Slightly white alabastrum(diploid) 3	66.593
	CNS0095595	Whole white alabastrum(diploid) 2	88.316
	CNS0095596	Whole white alabastrum(diploid) 3	85.506
	CNS0095597	Whole white alabastrum(diploid) 4	105.274
	CNS0095598	Silvery flower (diploied) 1	54.595
	CNS0095599	Silvery flower (diploied) 2	50.253
	CNS0095600	Silvery flower (diploied) 3	111.655
	CNS0095601	Golden flower (diploid) 1	44.808
	CNS0095602	Golden flower (diploid) 2	109.160
	CNS0095603	Golden flower (diploid) 3	101.694
	CNS0095604	Slightly white alabastrum(tetraploid) 1	95.414
	CNS0095605	Slightly white alabastrum(tetraploid) 2	95.896
	CNS0095606	Slightly white alabastrum(tetraploid) 3	112.944
	CNS0095607	Whole white alabastrum(tetraploid) 1	121.785
	CNS0095608	Whole white alabastrum(tetraploid) 2	133.610
	CNS0095609	Whole white alabastrum(tetraploid) 3	134.552
	CNS0095610	Silvery flower (diploied) 1	97.266
	CNS0095611	Silvery flower (diploied) 2	105.596
	CNS0095612	Silvery flower (diploied) 3	110.876
	CNS0095613	Golden flower (tetraploid) 1	50.579
	CNS0095614	Golden flower (tetraploid) 2	91.623
	CNS0095615	Golden flower (tetraploid) 3	106.277
CRA001975	CRR073297	Stem 1	124.474
	CRR073298	Stem 2	114.124
	CRR073299	Stem 3	116.462
	CRR073300	Leaf 1	173.523
	CRR073301	Leaf 2	148.529
	CRR073302	Leaf 3	124.808
	CRR073303	Juvenile bud 1	177.304
	CRR073304	Juvenile bud 2	132.647
	CRR073305	Juvenile bud 3	179.323
	CRR073306	Third green 1	116.827
	CRR073307	Third green 2	100.453
	CRR073308	Third green 3	111.500
	CRR073309	Second white 1	133.570
	CRR073310	Second white 2	119.424
	CRR073311	Second white 3	120.474
	CRR073312	Silver flowering 1	154.148
	CRR073313	Silver flowering 2	190.402
	CRR073314	Silver flowering 3	154.415
	CRR073315	Gold flowering 1	65.020
	CRR073316	Gold flowering 2	71.671
	CRR073317	Gold flowering 3	70.548
	CRR073318	Tawny withering 1	151.875
	CRR073319	Tawny withering 2	134.337
	CRR073320	Tawny withering 3	144.879