Detail information of GWHGAAZE022687


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277990.10PREDICTED: probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1 [Vitis vinifera]
COGYP_003624746.12E-23putative alpha/beta-Hydrolase
Swissprottr|Q8VYP9|ICML1_ARATH0Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1
trEMBLtr|D7T9D3|D7T9D3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI27104.3}
TAIR10AT5G15860.13E-161prenylcysteine methylesterase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7690466976908151-
GWHAAZE00000006mRNA7690466976908151-
GWHAAZE00000006exon7690466976904830-
GWHAAZE00000006exon7690492376905013-
GWHAAZE00000006exon7690553776905680-
GWHAAZE00000006exon7690579676905861-
GWHAAZE00000006exon7690625676906396-
GWHAAZE00000006exon7690649276906668-
GWHAAZE00000006exon7690698076907060-
GWHAAZE00000006exon7690718076907249-
GWHAAZE00000006exon7690739276907468-
GWHAAZE00000006exon7690784476908151-
GWHAAZE00000006CDS7690784476908151-
GWHAAZE00000006CDS7690739276907468-
GWHAAZE00000006CDS7690718076907249-
GWHAAZE00000006CDS7690698076907060-
GWHAAZE00000006CDS7690649276906668-
GWHAAZE00000006CDS7690625676906396-
GWHAAZE00000006CDS7690579676905861-
GWHAAZE00000006CDS7690553776905680-
GWHAAZE00000006CDS7690492376905013-
GWHAAZE00000006CDS7690466976904830-
Transcript Sequence

Network for GWHGAAZE022687

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07859.14Abhydrolase_31703791.30E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15889PCME Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Terpenoid backbone biosynthesismap00900

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.900
SRR3591706second leaf0.415
SRR3591707mature leaf0.000
SRR3591708Shoot apex2.034
SRR3591709Stem1.847
SRR3591710White floral bud2.261
SRR3591711White flower0.302
SRR3591712Green floral bud0.495
SRR3591713Yellow flower18.894
SRP173429 SRR8316895Juvenile bud stage 0.730
SRR8316896Juvenile bud stage 1.031
SRR8316897Juvenile bud stage 0.256
SRR8316894Third green stage 0.444
SRR8316900Third green stage 4.763
SRR8316901Third green stage 3.498
SRR8316898Complete white stage 6.157
SRR8316899Complete white stage 2.164
SRR8316903Complete white stage 8.723
SRR8316902Silver flowering stage2.444
SRR8316904Silver flowering stage4.423
SRR8316905Silver flowering stage2.736
SRR8316906Gold flowering stage 5.452
SRR8316907Gold flowering stage 3.557
SRR8316908Gold flowering stage 1.912
SRP132670SRR6706286Control4.261
SRR6706287Light intensity 50%5.166
SRR6706288Light intensity 20%5.781
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.970
CNS0095593Slightly white alabastrum(diploid) 24.619
CNS0095594Slightly white alabastrum(diploid) 31.227
CNS0095595Whole white alabastrum(diploid) 23.271
CNS0095596Whole white alabastrum(diploid) 36.951
CNS0095597Whole white alabastrum(diploid) 47.220
CNS0095598Silvery flower (diploied) 11.568
CNS0095599Silvery flower (diploied) 23.092
CNS0095600Silvery flower (diploied) 39.353
CNS0095601Golden flower (diploid) 14.499
CNS0095602Golden flower (diploid) 213.565
CNS0095603Golden flower (diploid) 313.034
CNS0095604Slightly white alabastrum(tetraploid) 12.047
CNS0095605Slightly white alabastrum(tetraploid) 22.818
CNS0095606Slightly white alabastrum(tetraploid) 33.562
CNS0095607Whole white alabastrum(tetraploid) 12.053
CNS0095608Whole white alabastrum(tetraploid) 23.653
CNS0095609Whole white alabastrum(tetraploid) 37.156
CNS0095610Silvery flower (diploied) 17.768
CNS0095611Silvery flower (diploied) 28.558
CNS0095612Silvery flower (diploied) 34.053
CNS0095613Golden flower (tetraploid) 15.151
CNS0095614Golden flower (tetraploid) 22.544
CNS0095615Golden flower (tetraploid) 342.842
CRA001975CRR073297Stem 11.545
CRR073298Stem 21.465
CRR073299Stem 31.181
CRR073300Leaf 15.875
CRR073301Leaf 27.003
CRR073302Leaf 33.874
CRR073303Juvenile bud 13.982
CRR073304Juvenile bud 24.799
CRR073305Juvenile bud 33.731
CRR073306Third green 14.237
CRR073307Third green 27.950
CRR073308Third green 33.790
CRR073309Second white 10.619
CRR073310Second white 20.236
CRR073311Second white 30.378
CRR073312Silver flowering 10.325
CRR073313Silver flowering 20.639
CRR073314Silver flowering 32.428
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.856
CRR073319Tawny withering 20.344
CRR073320Tawny withering 31.345