Detail information of GWHGAAZE022728


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002512055.11.89538E-47Protein CRABS CLAW, putative [Ricinus communis]
Swissprottr|Q76EJ0|YABDL_ORYSJ2E-38Protein DROOPING LEAF
trEMBLtr|B9REB6|B9REB6_RICCO7E-48Protein CRABS CLAW, putative {ECO:0000313|EMBL:EEF50724.1}
TAIR10AT1G69180.12E-24Plant-specific transcription factor YABBY family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7770031777702681-
GWHAAZE00000006mRNA7770031777702681-
GWHAAZE00000006exon7770031777700377-
GWHAAZE00000006exon7770080277700850-
GWHAAZE00000006exon7770095577701072-
GWHAAZE00000006exon7770134077701477-
GWHAAZE00000006exon7770229277702681-
GWHAAZE00000006five_prime_UTR7770238877702681-
GWHAAZE00000006CDS7770229277702387-
GWHAAZE00000006CDS7770134077701477-
GWHAAZE00000006CDS7770095577701072-
GWHAAZE00000006CDS7770080277700850-
GWHAAZE00000006CDS7770031777700377-
Transcript Sequence

Network for GWHGAAZE022728

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04690.14YABBY151331.60E-29
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-YABBY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007275biological_processmulticellular organism development

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud11.842
SRR3591711White flower7.582
SRR3591712Green floral bud4.617
SRR3591713Yellow flower3.314
SRP173429 SRR8316895Juvenile bud stage 6.847
SRR8316896Juvenile bud stage 3.003
SRR8316897Juvenile bud stage 1.190
SRR8316894Third green stage 2.946
SRR8316900Third green stage 3.139
SRR8316901Third green stage 3.585
SRR8316898Complete white stage 5.223
SRR8316899Complete white stage 13.855
SRR8316903Complete white stage 5.226
SRR8316902Silver flowering stage0.357
SRR8316904Silver flowering stage1.146
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.517
SRR8316908Gold flowering stage 0.799
SRP132670SRR6706286Control7.272
SRR6706287Light intensity 50%5.616
SRR6706288Light intensity 20%6.198
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.925
CNS0095593Slightly white alabastrum(diploid) 23.826
CNS0095594Slightly white alabastrum(diploid) 32.155
CNS0095595Whole white alabastrum(diploid) 21.617
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 41.414
CNS0095598Silvery flower (diploied) 13.636
CNS0095599Silvery flower (diploied) 25.882
CNS0095600Silvery flower (diploied) 33.507
CNS0095601Golden flower (diploid) 11.507
CNS0095602Golden flower (diploid) 22.109
CNS0095603Golden flower (diploid) 33.480
CNS0095604Slightly white alabastrum(tetraploid) 17.059
CNS0095605Slightly white alabastrum(tetraploid) 24.004
CNS0095606Slightly white alabastrum(tetraploid) 323.579
CNS0095607Whole white alabastrum(tetraploid) 15.792
CNS0095608Whole white alabastrum(tetraploid) 26.567
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (diploied) 13.654
CNS0095611Silvery flower (diploied) 27.197
CNS0095612Silvery flower (diploied) 32.319
CNS0095613Golden flower (tetraploid) 10.402
CNS0095614Golden flower (tetraploid) 24.890
CNS0095615Golden flower (tetraploid) 30.151
CRA001975CRR073297Stem 12.369
CRR073298Stem 21.295
CRR073299Stem 31.210
CRR073300Leaf 11.152
CRR073301Leaf 22.041
CRR073302Leaf 30.395
CRR073303Juvenile bud 11.590
CRR073304Juvenile bud 21.663
CRR073305Juvenile bud 32.756
CRR073306Third green 10.422
CRR073307Third green 23.386
CRR073308Third green 32.456
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.486
CRR073313Silver flowering 20.467
CRR073314Silver flowering 30.176
CRR073315Gold flowering 10.471
CRR073316Gold flowering 20.227
CRR073317Gold flowering 30.102
CRR073318Tawny withering 10.391
CRR073319Tawny withering 20.134
CRR073320Tawny withering 30.159